RNA–Protein interactions for RNA: ENSMUST00000115274.1

Pdgfrb-202, Transcript of Platelet-derived growth factor receptor beta, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdgfrb, Length 5,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfrb-202ENSMUST00000115274 Rhox8Q6VSS7 320 aa16.6■□□□□ 0.25
Pdgfrb-202ENSMUST00000115274 Rpgrip1Q9EPQ2 1331 aa15.71■□□□□ 0.11
Pdgfrb-202ENSMUST00000115274 NischQ80TM9 1593 aa15.25■□□□□ 0.03
Pdgfrb-202ENSMUST00000115274 Las1lA2BE28 776 aaKnown RBP15.03■□□□□ -0
Pdgfrb-202ENSMUST00000115274 Ehmt2Q9Z148 1263 aaKnown RBP14.97□□□□□ -0.01
Pdgfrb-202ENSMUST00000115274 Cngb1E1AZ71 1325 aa14.84□□□□□ -0.03
Pdgfrb-202ENSMUST00000115274 Ccdc136Q3TVA9 1136 aa14.84□□□□□ -0.03
Pdgfrb-202ENSMUST00000115274 Esf1Q3V1V3 845 aaKnown RBP14.7□□□□□ -0.06
Pdgfrb-202ENSMUST00000115274 Trim41Q5NCC3 630 aa14.68□□□□□ -0.06
Pdgfrb-202ENSMUST00000115274 Wdr66E9Q743 1299 aa14.54□□□□□ -0.08
Pdgfrb-202ENSMUST00000115274 Acin1Q9JIX8 1338 aaKnown RBP14.53□□□□□ -0.08
Pdgfrb-202ENSMUST00000115274 Zeb1Q64318 1117 aa14.48□□□□□ -0.09
Pdgfrb-202ENSMUST00000115274 Pelp1Q9DBD5 1123 aaKnown RBP14.46□□□□□ -0.09
Pdgfrb-202ENSMUST00000115274 Abcc9P70170 1546 aa14.41□□□□□ -0.1
Pdgfrb-202ENSMUST00000115274 Myt1Q8CFC2 1127 aa14.38□□□□□ -0.11
Pdgfrb-202ENSMUST00000115274 Gab3Q8BSM5 595 aa14.38□□□□□ -0.11
Pdgfrb-202ENSMUST00000115274 CenpbP27790 599 aa14.3□□□□□ -0.12
Pdgfrb-202ENSMUST00000115274 Npm2Q80W85 207 aa14.3□□□□□ -0.12
Pdgfrb-202ENSMUST00000115274 Ccdc180J3QNE4 1664 aa14.18□□□□□ -0.14
Pdgfrb-202ENSMUST00000115274 Abcc8B2RUS7 1588 aa14.15□□□□□ -0.14
Pdgfrb-202ENSMUST00000115274 Myt1lP97500 1187 aa14.14□□□□□ -0.15
Pdgfrb-202ENSMUST00000115274 NefmP08553 848 aa14.13□□□□□ -0.15
Pdgfrb-202ENSMUST00000115274 Pcgf6Q99NA9 353 aa14.12□□□□□ -0.15
Pdgfrb-202ENSMUST00000115274 Rtl1Q7M732 1744 aa14.11□□□□□ -0.15
Pdgfrb-202ENSMUST00000115274 HrcG5E8J6 738 aa14.11□□□□□ -0.15
Pdgfrb-202ENSMUST00000115274 Ube2uB1AUC4 352 aa14.1□□□□□ -0.15
Pdgfrb-202ENSMUST00000115274 DiexfQ8BTT6 772 aaKnown RBP14.06□□□□□ -0.16
Pdgfrb-202ENSMUST00000115274 Gm35339A0A140LHH9 1649 aa14.04□□□□□ -0.16
Pdgfrb-202ENSMUST00000115274 Amer1Q7TS75 1132 aa14.02□□□□□ -0.16
Pdgfrb-202ENSMUST00000115274 Zcchc6Q5BLK4 1491 aaKnown RBP13.98□□□□□ -0.17
Pdgfrb-202ENSMUST00000115274 Stra8P70278 393 aa13.87□□□□□ -0.19
Pdgfrb-202ENSMUST00000115274 Cdk11bP24788 784 aaKnown RBP13.87□□□□□ -0.19
Pdgfrb-202ENSMUST00000115274 UbtfP25976 765 aaKnown RBP13.84□□□□□ -0.19
Pdgfrb-202ENSMUST00000115274 Il27Q8K3I6 234 aa13.79□□□□□ -0.2
Pdgfrb-202ENSMUST00000115274 Supt5hO55201 1082 aaKnown RBP13.77□□□□□ -0.21
Pdgfrb-202ENSMUST00000115274 Nop58Q6DFW4 536 aaKnown RBP13.69□□□□□ -0.22
Pdgfrb-202ENSMUST00000115274 Tnnt3Q9QZ47 272 aa13.69□□□□□ -0.22
Pdgfrb-202ENSMUST00000115274 Slc24a1Q91WD8 1130 aa13.61□□□□□ -0.23
Pdgfrb-202ENSMUST00000115274 Ttbk1Q6PCN3 1308 aa13.56□□□□□ -0.24
Pdgfrb-202ENSMUST00000115274 Rtl5Q5DTT4 599 aa13.49□□□□□ -0.25
Pdgfrb-202ENSMUST00000115274 Ap3b1Q9Z1T1 1105 aa13.48□□□□□ -0.25
Pdgfrb-202ENSMUST00000115274 4933416C03RikQ3V063 378 aa13.45□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Fam50aQ9WV03 339 aaKnown RBP13.44□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Brd4Q9ESU6 1400 aaKnown RBP13.44□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Neurod1Q60867 357 aa13.42□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Ppargc1bQ8VHJ7 1014 aa13.42□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Rb1cc1Q9ESK9 1588 aa13.41□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 TonslQ6NZL6 1363 aa13.41□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Npm1Q61937 292 aaKnown RBP13.41□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 Mier1Q5UAK0 511 aa13.4□□□□□ -0.26
Pdgfrb-202ENSMUST00000115274 NrdcQ8BHG1 1161 aa13.35□□□□□ -0.27
Pdgfrb-202ENSMUST00000115274 NclP09405 707 aaKnown RBP13.33□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 ClspnQ80YR7 1315 aa13.32□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 Eif5bQ05D44 1216 aaKnown RBP13.3□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 Anks4bQ8K3X6 423 aa13.3□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 Dcaf1Q80TR8 1506 aa13.29□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 Bcl11aQ9QYE3 773 aa13.29□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 NacadQ5SWP3 1504 aa13.28□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 Anp32aO35381 247 aa13.27□□□□□ -0.28
Pdgfrb-202ENSMUST00000115274 NeflP08551 543 aa13.26□□□□□ -0.29
Pdgfrb-202ENSMUST00000115274 4930567H17RikQ3V0K5 233 aa13.26□□□□□ -0.29
Pdgfrb-202ENSMUST00000115274 Cep164Q5DU05 1446 aa13.25□□□□□ -0.29
Pdgfrb-202ENSMUST00000115274 Csrnp3P59055 597 aa13.24□□□□□ -0.29
Pdgfrb-202ENSMUST00000115274 Anp32bQ9EST5 272 aaKnown RBP13.24□□□□□ -0.29
Pdgfrb-202ENSMUST00000115274 Aplp2Q06335 707 aa13.22□□□□□ -0.29
Pdgfrb-202ENSMUST00000115274 Sall2Q9QX96 1004 aa13.18□□□□□ -0.3
Pdgfrb-202ENSMUST00000115274 Plekhg3Q4VAC9 1341 aa13.17□□□□□ -0.3
Pdgfrb-202ENSMUST00000115274 Chic1Q8CBW7 227 aa13.16□□□□□ -0.3
Pdgfrb-202ENSMUST00000115274 Lmod2Q3UHZ5 550 aa13.16□□□□□ -0.3
Pdgfrb-202ENSMUST00000115274 Baz1aO88379 1555 aa13.13□□□□□ -0.31
Pdgfrb-202ENSMUST00000115274 Gm38655A0A286YDK6 273 aa13.13□□□□□ -0.31
Pdgfrb-202ENSMUST00000115274 Kdm5dQ62240 1548 aa13.13□□□□□ -0.31
Pdgfrb-202ENSMUST00000115274 Os9Q8K2C7 672 aa13.11□□□□□ -0.31
Pdgfrb-202ENSMUST00000115274 Clip1Q922J3 1391 aa13.09□□□□□ -0.31
Pdgfrb-202ENSMUST00000115274 Ubl4bQ9CQ84 188 aa13.06□□□□□ -0.32
Pdgfrb-202ENSMUST00000115274 1700123L14RikQ3V2K7 440 aa13.05□□□□□ -0.32
Pdgfrb-202ENSMUST00000115274 DaxxO35613 739 aa13□□□□□ -0.33
Pdgfrb-202ENSMUST00000115274 Golga3P55937 1487 aa12.95□□□□□ -0.34
Pdgfrb-202ENSMUST00000115274 Ccer2J3QPU5 274 aa12.95□□□□□ -0.34
Pdgfrb-202ENSMUST00000115274 Hnrnpul2Q00PI9 745 aaKnown RBP12.93□□□□□ -0.34
Pdgfrb-202ENSMUST00000115274 Zbtb7cQ8VCZ7 619 aa12.93□□□□□ -0.34
Pdgfrb-202ENSMUST00000115274 Hdac5Q9Z2V6 1113 aa12.9□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 ScribQ80U72 1612 aa12.89□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 Calr4Q3TQS0 420 aa12.88□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 Mapk8ip2Q9ERE9 830 aa12.87□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 Rsf1E9PWW9 1441 aaKnown RBP12.87□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 Eid3Q3V124 375 aa12.85□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 Ifnlr1Q8CGK5 535 aa12.85□□□□□ -0.35
Pdgfrb-202ENSMUST00000115274 Kif15Q6P9L6 1387 aa12.83□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Fkbp15Q6P9Q6 1216 aaKnown RBP12.82□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Ppp4r2Q0VGB7 417 aa12.81□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Ercc6F8VPZ5 1481 aa12.81□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 BlmO88700 1416 aa12.81□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Setd5Q5XJV7 1441 aa12.8□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Gm13697A2AK42 830 aa12.78□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Ccdc9Q8VC31 543 aaKnown RBP12.78□□□□□ -0.36
Pdgfrb-202ENSMUST00000115274 Erich6D3Z6S9 713 aa12.77□□□□□ -0.37
Pdgfrb-202ENSMUST00000115274 Fam71e1A1L3C1 212 aa12.76□□□□□ -0.37
Pdgfrb-202ENSMUST00000115274 Wdr43Q6ZQL4 677 aaKnown RBP12.75□□□□□ -0.37
Pdgfrb-202ENSMUST00000115274 Ccdc18Q640L5 1455 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 58.1 ms