RNA–Protein interactions for RNA: ENSMUST00000111728.7

Casc1-203, Transcript of Protein CASC1, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Casc1, Length 2,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1-203ENSMUST00000111728 Rpgrip1Q9EPQ2 1331 aa19.24■□□□□ 0.67
Casc1-203ENSMUST00000111728 Rtl1Q7M732 1744 aa18.71■□□□□ 0.59
Casc1-203ENSMUST00000111728 NischQ80TM9 1593 aa18.61■□□□□ 0.57
Casc1-203ENSMUST00000111728 Ccdc180J3QNE4 1664 aa18.53■□□□□ 0.56
Casc1-203ENSMUST00000111728 Gm35339A0A140LHH9 1649 aa18.51■□□□□ 0.55
Casc1-203ENSMUST00000111728 Acin1Q9JIX8 1338 aaKnown RBP18.47■□□□□ 0.55
Casc1-203ENSMUST00000111728 Pcgf6Q99NA9 353 aa18.23■□□□□ 0.51
Casc1-203ENSMUST00000111728 Abcc9P70170 1546 aa18.15■□□□□ 0.5
Casc1-203ENSMUST00000111728 Rhox8Q6VSS7 320 aa18.01■□□□□ 0.47
Casc1-203ENSMUST00000111728 Dcaf1Q80TR8 1506 aa17.82■□□□□ 0.44
Casc1-203ENSMUST00000111728 Abcc8B2RUS7 1588 aa17.78■□□□□ 0.44
Casc1-203ENSMUST00000111728 Zcchc6Q5BLK4 1491 aaKnown RBP17.75■□□□□ 0.43
Casc1-203ENSMUST00000111728 Trim41Q5NCC3 630 aa17.72■□□□□ 0.43
Casc1-203ENSMUST00000111728 Ehmt2Q9Z148 1263 aaKnown RBP17.67■□□□□ 0.42
Casc1-203ENSMUST00000111728 Neurod1Q60867 357 aa17.6■□□□□ 0.41
Casc1-203ENSMUST00000111728 Supt5hO55201 1082 aaKnown RBP17.59■□□□□ 0.41
Casc1-203ENSMUST00000111728 Las1lA2BE28 776 aaKnown RBP17.58■□□□□ 0.4
Casc1-203ENSMUST00000111728 HrcG5E8J6 738 aa17.51■□□□□ 0.39
Casc1-203ENSMUST00000111728 Myt1Q8CFC2 1127 aa17.38■□□□□ 0.37
Casc1-203ENSMUST00000111728 DiexfQ8BTT6 772 aaKnown RBP17.31■□□□□ 0.36
Casc1-203ENSMUST00000111728 1700123L14RikQ3V2K7 440 aa17.26■□□□□ 0.35
Casc1-203ENSMUST00000111728 CenpbP27790 599 aa17.22■□□□□ 0.35
Casc1-203ENSMUST00000111728 Anks4bQ8K3X6 423 aa17.13■□□□□ 0.33
Casc1-203ENSMUST00000111728 ScribQ80U72 1612 aa17.05■□□□□ 0.32
Casc1-203ENSMUST00000111728 Csrnp3P59055 597 aa17.01■□□□□ 0.31
Casc1-203ENSMUST00000111728 Ube2uB1AUC4 352 aa16.96■□□□□ 0.31
Casc1-203ENSMUST00000111728 Aplp2Q06335 707 aa16.94■□□□□ 0.3
Casc1-203ENSMUST00000111728 Cngb1E1AZ71 1325 aa16.9■□□□□ 0.3
Casc1-203ENSMUST00000111728 Zeb1Q64318 1117 aa16.88■□□□□ 0.29
Casc1-203ENSMUST00000111728 Sall2Q9QX96 1004 aa16.88■□□□□ 0.29
Casc1-203ENSMUST00000111728 NefmP08553 848 aa16.87■□□□□ 0.29
Casc1-203ENSMUST00000111728 Cep164Q5DU05 1446 aa16.7■□□□□ 0.26
Casc1-203ENSMUST00000111728 Bcl11aQ9QYE3 773 aa16.67■□□□□ 0.26
Casc1-203ENSMUST00000111728 Ccdc136Q3TVA9 1136 aa16.61■□□□□ 0.25
Casc1-203ENSMUST00000111728 CatipB9EKE5 520 aa16.6■□□□□ 0.25
Casc1-203ENSMUST00000111728 Cdk11bP24788 784 aaKnown RBP16.6■□□□□ 0.25
Casc1-203ENSMUST00000111728 Mier1Q5UAK0 511 aa16.56■□□□□ 0.24
Casc1-203ENSMUST00000111728 Kdm5dQ62240 1548 aa16.52■□□□□ 0.23
Casc1-203ENSMUST00000111728 Nop58Q6DFW4 536 aaKnown RBP16.51■□□□□ 0.23
Casc1-203ENSMUST00000111728 NacadQ5SWP3 1504 aa16.47■□□□□ 0.23
Casc1-203ENSMUST00000111728 Ttbk1Q6PCN3 1308 aa16.43■□□□□ 0.22
Casc1-203ENSMUST00000111728 ClspnQ80YR7 1315 aa16.4■□□□□ 0.22
Casc1-203ENSMUST00000111728 Rb1cc1Q9ESK9 1588 aa16.38■□□□□ 0.21
Casc1-203ENSMUST00000111728 Gm38655A0A286YDK6 273 aa16.37■□□□□ 0.21
Casc1-203ENSMUST00000111728 Aebp2Q9Z248 504 aaKnown RBP16.37■□□□□ 0.21
Casc1-203ENSMUST00000111728 Wdr66E9Q743 1299 aa16.34■□□□□ 0.21
Casc1-203ENSMUST00000111728 Amer1Q7TS75 1132 aa16.33■□□□□ 0.21
Casc1-203ENSMUST00000111728 Fam71e1A1L3C1 212 aa16.3■□□□□ 0.2
Casc1-203ENSMUST00000111728 Baz1aO88379 1555 aa16.23■□□□□ 0.19
Casc1-203ENSMUST00000111728 PrkcshO08795 521 aa16.18■□□□□ 0.18
Casc1-203ENSMUST00000111728 Plppr3Q7TPB0 716 aa16.16■□□□□ 0.18
Casc1-203ENSMUST00000111728 Sycp2Q9CUU3 1500 aa16.16■□□□□ 0.18
Casc1-203ENSMUST00000111728 Rsf1E9PWW9 1441 aaKnown RBP16.12■□□□□ 0.17
Casc1-203ENSMUST00000111728 Tnnt3Q9QZ47 272 aa16.11■□□□□ 0.17
Casc1-203ENSMUST00000111728 Chic1Q8CBW7 227 aa16.06■□□□□ 0.16
Casc1-203ENSMUST00000111728 Gab3Q8BSM5 595 aa16.05■□□□□ 0.16
Casc1-203ENSMUST00000111728 Hnrnpul2Q00PI9 745 aaKnown RBP16.04■□□□□ 0.16
Casc1-203ENSMUST00000111728 Ifnlr1Q8CGK5 535 aa16.03■□□□□ 0.16
Casc1-203ENSMUST00000111728 SafbD3YXK2 937 aaKnown RBP16.03■□□□□ 0.16
Casc1-203ENSMUST00000111728 Mapk8ip2Q9ERE9 830 aa16.03■□□□□ 0.16
Casc1-203ENSMUST00000111728 Ppargc1bQ8VHJ7 1014 aa16.02■□□□□ 0.16
Casc1-203ENSMUST00000111728 Rtl5Q5DTT4 599 aa16.01■□□□□ 0.15
Casc1-203ENSMUST00000111728 TonslQ6NZL6 1363 aa15.96■□□□□ 0.15
Casc1-203ENSMUST00000111728 Smarca2Q6DIC0 1577 aa15.95■□□□□ 0.14
Casc1-203ENSMUST00000111728 BicraF8VPZ9 1578 aa15.94■□□□□ 0.14
Casc1-203ENSMUST00000111728 Anp32aO35381 247 aa15.94■□□□□ 0.14
Casc1-203ENSMUST00000111728 UbtfP25976 765 aaKnown RBP15.89■□□□□ 0.13
Casc1-203ENSMUST00000111728 Ccdc88bQ4QRL3 1481 aa15.87■□□□□ 0.13
Casc1-203ENSMUST00000111728 Crybg2B7ZCC2 1516 aa15.79■□□□□ 0.12
Casc1-203ENSMUST00000111728 Pelp1Q9DBD5 1123 aaKnown RBP15.77■□□□□ 0.12
Casc1-203ENSMUST00000111728 ArxO35085 564 aa15.76■□□□□ 0.11
Casc1-203ENSMUST00000111728 Znf710Q3U288 666 aa15.71■□□□□ 0.11
Casc1-203ENSMUST00000111728 Golga3P55937 1487 aa15.71■□□□□ 0.11
Casc1-203ENSMUST00000111728 Nolc1E9Q5C9 702 aaKnown RBP15.69■□□□□ 0.1
Casc1-203ENSMUST00000111728 Ap3b1Q9Z1T1 1105 aa15.69■□□□□ 0.1
Casc1-203ENSMUST00000111728 Hdac5Q9Z2V6 1113 aa15.69■□□□□ 0.1
Casc1-203ENSMUST00000111728 Stra8P70278 393 aa15.63■□□□□ 0.09
Casc1-203ENSMUST00000111728 Supt16hQ920B9 1047 aa15.61■□□□□ 0.09
Casc1-203ENSMUST00000111728 Brd4Q9ESU6 1400 aaKnown RBP15.59■□□□□ 0.09
Casc1-203ENSMUST00000111728 Ncapd3Q6ZQK0 1506 aa15.59■□□□□ 0.09
Casc1-203ENSMUST00000111728 Calr4Q3TQS0 420 aa15.57■□□□□ 0.08
Casc1-203ENSMUST00000111728 Rapgef2Q8CHG7 1496 aa15.57■□□□□ 0.08
Casc1-203ENSMUST00000111728 Rpap1Q80TE0 1409 aa15.53■□□□□ 0.08
Casc1-203ENSMUST00000111728 Fgd1P52734 960 aa15.51■□□□□ 0.07
Casc1-203ENSMUST00000111728 Upf2A2AT37 1269 aaKnown RBP15.5■□□□□ 0.07
Casc1-203ENSMUST00000111728 Ccdc9Q8VC31 543 aaKnown RBP15.46■□□□□ 0.07
Casc1-203ENSMUST00000111728 Top2bQ64511 1612 aa15.46■□□□□ 0.06
Casc1-203ENSMUST00000111728 Gtf3c3Q3TMP1 882 aa15.44■□□□□ 0.06
Casc1-203ENSMUST00000111728 Washc2Q6PGL7 1334 aa15.43■□□□□ 0.06
Casc1-203ENSMUST00000111728 NrdcQ8BHG1 1161 aa15.43■□□□□ 0.06
Casc1-203ENSMUST00000111728 Ccdc27Q3V036 639 aa15.42■□□□□ 0.06
Casc1-203ENSMUST00000111728 Kdm5bQ80Y84 1544 aa15.42■□□□□ 0.06
Casc1-203ENSMUST00000111728 Cep162Q6ZQ06 1403 aa15.39■□□□□ 0.05
Casc1-203ENSMUST00000111728 Cecr2E9Q2Z1 1453 aa15.39■□□□□ 0.05
Casc1-203ENSMUST00000111728 Pds5bQ4VA53 1446 aaKnown RBP15.37■□□□□ 0.05
Casc1-203ENSMUST00000111728 Synj1Q8CHC4 1574 aa15.37■□□□□ 0.05
Casc1-203ENSMUST00000111728 Wdr43Q6ZQL4 677 aaKnown RBP15.37■□□□□ 0.05
Casc1-203ENSMUST00000111728 Ppp4r2Q0VGB7 417 aa15.35■□□□□ 0.05
Casc1-203ENSMUST00000111728 Pknox2Q8BG99 474 aa15.33■□□□□ 0.04
Casc1-203ENSMUST00000111728 Dnajc5bQ9CQ94 199 aa15.33■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms