RNA–Protein interactions for RNA: ENSMUST00000111089.7

Nefm-202, Transcript of Neurofilament medium polypeptide, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Nefm, Length 3,680 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nefm-202ENSMUST00000111089 NischQ80TM9 1593 aa20.84■□□□□ 0.93
Nefm-202ENSMUST00000111089 Rhox8Q6VSS7 320 aa20.42■□□□□ 0.86
Nefm-202ENSMUST00000111089 Abcc9P70170 1546 aa19.98■□□□□ 0.79
Nefm-202ENSMUST00000111089 Gm35339A0A140LHH9 1649 aa19.8■□□□□ 0.76
Nefm-202ENSMUST00000111089 Abcc8B2RUS7 1588 aa19.62■□□□□ 0.73
Nefm-202ENSMUST00000111089 Rpgrip1Q9EPQ2 1331 aa19.24■□□□□ 0.67
Nefm-202ENSMUST00000111089 Ehmt2Q9Z148 1263 aaKnown RBP19.18■□□□□ 0.66
Nefm-202ENSMUST00000111089 Ccdc136Q3TVA9 1136 aa18.78■□□□□ 0.6
Nefm-202ENSMUST00000111089 Acin1Q9JIX8 1338 aaKnown RBP18.64■□□□□ 0.57
Nefm-202ENSMUST00000111089 Pcgf6Q99NA9 353 aa18.62■□□□□ 0.57
Nefm-202ENSMUST00000111089 Rtl1Q7M732 1744 aa18.61■□□□□ 0.57
Nefm-202ENSMUST00000111089 Ccdc180J3QNE4 1664 aa18.49■□□□□ 0.55
Nefm-202ENSMUST00000111089 Rb1cc1Q9ESK9 1588 aa18.25■□□□□ 0.51
Nefm-202ENSMUST00000111089 Trim41Q5NCC3 630 aa18.22■□□□□ 0.51
Nefm-202ENSMUST00000111089 Zcchc6Q5BLK4 1491 aaKnown RBP18.21■□□□□ 0.51
Nefm-202ENSMUST00000111089 Supt5hO55201 1082 aaKnown RBP18.16■□□□□ 0.5
Nefm-202ENSMUST00000111089 ScribQ80U72 1612 aa18.15■□□□□ 0.5
Nefm-202ENSMUST00000111089 Dcaf1Q80TR8 1506 aa18.11■□□□□ 0.49
Nefm-202ENSMUST00000111089 Cngb1E1AZ71 1325 aa18.07■□□□□ 0.48
Nefm-202ENSMUST00000111089 Zeb1Q64318 1117 aa18.07■□□□□ 0.48
Nefm-202ENSMUST00000111089 Kdm5dQ62240 1548 aa18.07■□□□□ 0.48
Nefm-202ENSMUST00000111089 Las1lA2BE28 776 aaKnown RBP18.04■□□□□ 0.48
Nefm-202ENSMUST00000111089 NacadQ5SWP3 1504 aa18.04■□□□□ 0.48
Nefm-202ENSMUST00000111089 HrcG5E8J6 738 aa18■□□□□ 0.47
Nefm-202ENSMUST00000111089 Neurod1Q60867 357 aa17.99■□□□□ 0.47
Nefm-202ENSMUST00000111089 Esf1Q3V1V3 845 aaKnown RBP17.96■□□□□ 0.47
Nefm-202ENSMUST00000111089 Baz1aO88379 1555 aa17.95■□□□□ 0.46
Nefm-202ENSMUST00000111089 Gab3Q8BSM5 595 aa17.85■□□□□ 0.45
Nefm-202ENSMUST00000111089 Wdr66E9Q743 1299 aa17.58■□□□□ 0.4
Nefm-202ENSMUST00000111089 Csrnp3P59055 597 aa17.56■□□□□ 0.4
Nefm-202ENSMUST00000111089 CenpbP27790 599 aa17.56■□□□□ 0.4
Nefm-202ENSMUST00000111089 Sycp2Q9CUU3 1500 aa17.54■□□□□ 0.4
Nefm-202ENSMUST00000111089 1700123L14RikQ3V2K7 440 aa17.53■□□□□ 0.4
Nefm-202ENSMUST00000111089 Brd4Q9ESU6 1400 aaKnown RBP17.5■□□□□ 0.39
Nefm-202ENSMUST00000111089 Gm38655A0A286YDK6 273 aa17.46■□□□□ 0.39
Nefm-202ENSMUST00000111089 Crybg2B7ZCC2 1516 aa17.45■□□□□ 0.38
Nefm-202ENSMUST00000111089 Ppargc1bQ8VHJ7 1014 aa17.44■□□□□ 0.38
Nefm-202ENSMUST00000111089 Chic1Q8CBW7 227 aa17.43■□□□□ 0.38
Nefm-202ENSMUST00000111089 Smarca2Q6DIC0 1577 aa17.4■□□□□ 0.38
Nefm-202ENSMUST00000111089 Sall2Q9QX96 1004 aa17.37■□□□□ 0.37
Nefm-202ENSMUST00000111089 Cep164Q5DU05 1446 aa17.35■□□□□ 0.37
Nefm-202ENSMUST00000111089 Myt1lP97500 1187 aa17.32■□□□□ 0.36
Nefm-202ENSMUST00000111089 Npm2Q80W85 207 aa17.31■□□□□ 0.36
Nefm-202ENSMUST00000111089 DiexfQ8BTT6 772 aaKnown RBP17.29■□□□□ 0.36
Nefm-202ENSMUST00000111089 Cecr2E9Q2Z1 1453 aa17.28■□□□□ 0.36
Nefm-202ENSMUST00000111089 Anks4bQ8K3X6 423 aa17.23■□□□□ 0.35
Nefm-202ENSMUST00000111089 NefmP08553 848 aa17.22■□□□□ 0.35
Nefm-202ENSMUST00000111089 Cdk11bP24788 784 aaKnown RBP17.21■□□□□ 0.35
Nefm-202ENSMUST00000111089 Myt1Q8CFC2 1127 aa17.2■□□□□ 0.34
Nefm-202ENSMUST00000111089 Golga3P55937 1487 aa17.18■□□□□ 0.34
Nefm-202ENSMUST00000111089 Rsf1E9PWW9 1441 aaKnown RBP17.17■□□□□ 0.34
Nefm-202ENSMUST00000111089 Nop58Q6DFW4 536 aaKnown RBP17.15■□□□□ 0.34
Nefm-202ENSMUST00000111089 Il27Q8K3I6 234 aa17.14■□□□□ 0.33
Nefm-202ENSMUST00000111089 Mier1Q5UAK0 511 aa17.12■□□□□ 0.33
Nefm-202ENSMUST00000111089 UbtfP25976 765 aaKnown RBP17.06■□□□□ 0.32
Nefm-202ENSMUST00000111089 Ccdc88bQ4QRL3 1481 aa17.06■□□□□ 0.32
Nefm-202ENSMUST00000111089 Synj1Q8CHC4 1574 aa17.03■□□□□ 0.32
Nefm-202ENSMUST00000111089 CftrP26361 1476 aa17.03■□□□□ 0.32
Nefm-202ENSMUST00000111089 Aplp2Q06335 707 aa17■□□□□ 0.31
Nefm-202ENSMUST00000111089 BicraF8VPZ9 1578 aa16.98■□□□□ 0.31
Nefm-202ENSMUST00000111089 Bcl11aQ9QYE3 773 aa16.9■□□□□ 0.3
Nefm-202ENSMUST00000111089 Aebp2Q9Z248 504 aaKnown RBP16.88■□□□□ 0.29
Nefm-202ENSMUST00000111089 Mapk8ip2Q9ERE9 830 aa16.86■□□□□ 0.29
Nefm-202ENSMUST00000111089 Smarca4Q3TKT4 1613 aaKnown RBP16.83■□□□□ 0.28
Nefm-202ENSMUST00000111089 Ap3b1Q9Z1T1 1105 aa16.78■□□□□ 0.28
Nefm-202ENSMUST00000111089 Fam71e1A1L3C1 212 aa16.77■□□□□ 0.28
Nefm-202ENSMUST00000111089 Cttnbp2B9EJA2 1648 aa16.77■□□□□ 0.27
Nefm-202ENSMUST00000111089 Pds5bQ4VA53 1446 aaKnown RBP16.74■□□□□ 0.27
Nefm-202ENSMUST00000111089 Ttbk1Q6PCN3 1308 aa16.72■□□□□ 0.27
Nefm-202ENSMUST00000111089 Plekhg3Q4VAC9 1341 aa16.71■□□□□ 0.27
Nefm-202ENSMUST00000111089 ClspnQ80YR7 1315 aa16.71■□□□□ 0.27
Nefm-202ENSMUST00000111089 Atad2bE9Q166 1460 aaKnown RBP16.69■□□□□ 0.26
Nefm-202ENSMUST00000111089 Fmn1Q05860 1466 aa16.68■□□□□ 0.26
Nefm-202ENSMUST00000111089 SafbD3YXK2 937 aaKnown RBP16.67■□□□□ 0.26
Nefm-202ENSMUST00000111089 Npm1Q61937 292 aaKnown RBP16.67■□□□□ 0.26
Nefm-202ENSMUST00000111089 Kif15Q6P9L6 1387 aa16.65■□□□□ 0.26
Nefm-202ENSMUST00000111089 Iqgap2Q3UQ44 1575 aa16.64■□□□□ 0.25
Nefm-202ENSMUST00000111089 Clip1Q922J3 1391 aa16.62■□□□□ 0.25
Nefm-202ENSMUST00000111089 Ubl4bQ9CQ84 188 aa16.62■□□□□ 0.25
Nefm-202ENSMUST00000111089 Ercc6F8VPZ5 1481 aa16.59■□□□□ 0.25
Nefm-202ENSMUST00000111089 PrkcshO08795 521 aa16.57■□□□□ 0.24
Nefm-202ENSMUST00000111089 Cc2d2aQ8CFW7 1633 aa16.54■□□□□ 0.24
Nefm-202ENSMUST00000111089 TonslQ6NZL6 1363 aa16.53■□□□□ 0.24
Nefm-202ENSMUST00000111089 Cep162Q6ZQ06 1403 aa16.53■□□□□ 0.24
Nefm-202ENSMUST00000111089 Ifnlr1Q8CGK5 535 aa16.52■□□□□ 0.24
Nefm-202ENSMUST00000111089 Amer1Q7TS75 1132 aa16.52■□□□□ 0.23
Nefm-202ENSMUST00000111089 Hnrnpul2Q00PI9 745 aaKnown RBP16.51■□□□□ 0.23
Nefm-202ENSMUST00000111089 Slc24a1Q91WD8 1130 aa16.5■□□□□ 0.23
Nefm-202ENSMUST00000111089 Top2bQ64511 1612 aa16.5■□□□□ 0.23
Nefm-202ENSMUST00000111089 Pelp1Q9DBD5 1123 aaKnown RBP16.48■□□□□ 0.23
Nefm-202ENSMUST00000111089 Ube2uB1AUC4 352 aa16.48■□□□□ 0.23
Nefm-202ENSMUST00000111089 Rapgef2Q8CHG7 1496 aa16.47■□□□□ 0.23
Nefm-202ENSMUST00000111089 Tnnt3Q9QZ47 272 aa16.45■□□□□ 0.22
Nefm-202ENSMUST00000111089 Lmod2Q3UHZ5 550 aa16.44■□□□□ 0.22
Nefm-202ENSMUST00000111089 Fam50aQ9WV03 339 aaKnown RBP16.42■□□□□ 0.22
Nefm-202ENSMUST00000111089 Ccdc18Q640L5 1455 aa16.39■□□□□ 0.21
Nefm-202ENSMUST00000111089 Setd5Q5XJV7 1441 aa16.37■□□□□ 0.21
Nefm-202ENSMUST00000111089 Top2aQ01320 1528 aaKnown RBP16.37■□□□□ 0.21
Nefm-202ENSMUST00000111089 Anp32aO35381 247 aa16.36■□□□□ 0.21
Nefm-202ENSMUST00000111089 Frmpd1A2AKB4 1549 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms