RNA–Protein interactions for RNA: ENSMUST00000107343.7

Chtop-205, Transcript of Chromatin target of PRMT1 protein, mousemouse

TSL 1 (best) BASIC

Gene Chtop, Length 3,118 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chtop-205ENSMUST00000107343 Rpgrip1Q9EPQ2 1331 aa24.89■■□□□ 1.58
Chtop-205ENSMUST00000107343 Rtl1Q7M732 1744 aa24.12■■□□□ 1.45
Chtop-205ENSMUST00000107343 Ccdc180J3QNE4 1664 aa23.87■■□□□ 1.41
Chtop-205ENSMUST00000107343 Acin1Q9JIX8 1338 aaKnown RBP23.86■■□□□ 1.41
Chtop-205ENSMUST00000107343 NischQ80TM9 1593 aa23.84■■□□□ 1.41
Chtop-205ENSMUST00000107343 Pcgf6Q99NA9 353 aa23.58■■□□□ 1.37
Chtop-205ENSMUST00000107343 Gm35339A0A140LHH9 1649 aa23.31■■□□□ 1.32
Chtop-205ENSMUST00000107343 Abcc9P70170 1546 aa23.24■■□□□ 1.31
Chtop-205ENSMUST00000107343 Dcaf1Q80TR8 1506 aa23.02■■□□□ 1.27
Chtop-205ENSMUST00000107343 Rhox8Q6VSS7 320 aa22.96■■□□□ 1.27
Chtop-205ENSMUST00000107343 Trim41Q5NCC3 630 aa22.95■■□□□ 1.26
Chtop-205ENSMUST00000107343 Zcchc6Q5BLK4 1491 aaKnown RBP22.88■■□□□ 1.25
Chtop-205ENSMUST00000107343 Neurod1Q60867 357 aa22.8■■□□□ 1.24
Chtop-205ENSMUST00000107343 Las1lA2BE28 776 aaKnown RBP22.76■■□□□ 1.23
Chtop-205ENSMUST00000107343 Supt5hO55201 1082 aaKnown RBP22.73■■□□□ 1.23
Chtop-205ENSMUST00000107343 Ehmt2Q9Z148 1263 aaKnown RBP22.7■■□□□ 1.22
Chtop-205ENSMUST00000107343 Myt1Q8CFC2 1127 aa22.6■■□□□ 1.21
Chtop-205ENSMUST00000107343 Abcc8B2RUS7 1588 aa22.58■■□□□ 1.21
Chtop-205ENSMUST00000107343 HrcG5E8J6 738 aa22.49■■□□□ 1.19
Chtop-205ENSMUST00000107343 1700123L14RikQ3V2K7 440 aa22.39■■□□□ 1.17
Chtop-205ENSMUST00000107343 CenpbP27790 599 aa22.35■■□□□ 1.17
Chtop-205ENSMUST00000107343 Anks4bQ8K3X6 423 aa22.17■■□□□ 1.14
Chtop-205ENSMUST00000107343 Csrnp3P59055 597 aa22.03■■□□□ 1.12
Chtop-205ENSMUST00000107343 DiexfQ8BTT6 772 aaKnown RBP22.01■■□□□ 1.11
Chtop-205ENSMUST00000107343 Aplp2Q06335 707 aa21.96■■□□□ 1.11
Chtop-205ENSMUST00000107343 Sall2Q9QX96 1004 aa21.79■■□□□ 1.08
Chtop-205ENSMUST00000107343 Cngb1E1AZ71 1325 aa21.77■■□□□ 1.08
Chtop-205ENSMUST00000107343 Zeb1Q64318 1117 aa21.72■■□□□ 1.07
Chtop-205ENSMUST00000107343 Bcl11aQ9QYE3 773 aa21.72■■□□□ 1.07
Chtop-205ENSMUST00000107343 NefmP08553 848 aa21.71■■□□□ 1.07
Chtop-205ENSMUST00000107343 Cep164Q5DU05 1446 aa21.47■■□□□ 1.03
Chtop-205ENSMUST00000107343 ScribQ80U72 1612 aa21.46■■□□□ 1.03
Chtop-205ENSMUST00000107343 Cdk11bP24788 784 aaKnown RBP21.4■■□□□ 1.02
Chtop-205ENSMUST00000107343 Mier1Q5UAK0 511 aa21.3■■□□□ 1
Chtop-205ENSMUST00000107343 Nop58Q6DFW4 536 aaKnown RBP21.28■■□□□ 1
Chtop-205ENSMUST00000107343 Ccdc136Q3TVA9 1136 aa21.18■□□□□ 0.98
Chtop-205ENSMUST00000107343 Gm38655A0A286YDK6 273 aa21.17■□□□□ 0.98
Chtop-205ENSMUST00000107343 ClspnQ80YR7 1315 aa21.14■□□□□ 0.97
Chtop-205ENSMUST00000107343 Fam71e1A1L3C1 212 aa21.11■□□□□ 0.97
Chtop-205ENSMUST00000107343 Aebp2Q9Z248 504 aaKnown RBP21.1■□□□□ 0.97
Chtop-205ENSMUST00000107343 PrkcshO08795 521 aa21.09■□□□□ 0.97
Chtop-205ENSMUST00000107343 Wdr66E9Q743 1299 aa21■□□□□ 0.95
Chtop-205ENSMUST00000107343 Rb1cc1Q9ESK9 1588 aa20.95■□□□□ 0.94
Chtop-205ENSMUST00000107343 Kdm5dQ62240 1548 aa20.91■□□□□ 0.94
Chtop-205ENSMUST00000107343 Ifnlr1Q8CGK5 535 aa20.85■□□□□ 0.93
Chtop-205ENSMUST00000107343 Tnnt3Q9QZ47 272 aa20.78■□□□□ 0.92
Chtop-205ENSMUST00000107343 Baz1aO88379 1555 aa20.77■□□□□ 0.92
Chtop-205ENSMUST00000107343 NacadQ5SWP3 1504 aa20.76■□□□□ 0.91
Chtop-205ENSMUST00000107343 Amer1Q7TS75 1132 aa20.74■□□□□ 0.91
Chtop-205ENSMUST00000107343 Rtl5Q5DTT4 599 aa20.72■□□□□ 0.91
Chtop-205ENSMUST00000107343 Mapk8ip2Q9ERE9 830 aa20.72■□□□□ 0.91
Chtop-205ENSMUST00000107343 SafbD3YXK2 937 aaKnown RBP20.71■□□□□ 0.91
Chtop-205ENSMUST00000107343 Hnrnpul2Q00PI9 745 aaKnown RBP20.71■□□□□ 0.91
Chtop-205ENSMUST00000107343 Rsf1E9PWW9 1441 aaKnown RBP20.68■□□□□ 0.9
Chtop-205ENSMUST00000107343 Anp32aO35381 247 aa20.6■□□□□ 0.89
Chtop-205ENSMUST00000107343 Ppargc1bQ8VHJ7 1014 aa20.58■□□□□ 0.89
Chtop-205ENSMUST00000107343 Chic1Q8CBW7 227 aa20.56■□□□□ 0.88
Chtop-205ENSMUST00000107343 TonslQ6NZL6 1363 aa20.51■□□□□ 0.87
Chtop-205ENSMUST00000107343 Gab3Q8BSM5 595 aa20.51■□□□□ 0.87
Chtop-205ENSMUST00000107343 Smarca2Q6DIC0 1577 aa20.44■□□□□ 0.86
Chtop-205ENSMUST00000107343 Hdac5Q9Z2V6 1113 aa20.4■□□□□ 0.86
Chtop-205ENSMUST00000107343 Pelp1Q9DBD5 1123 aaKnown RBP20.36■□□□□ 0.85
Chtop-205ENSMUST00000107343 Sycp2Q9CUU3 1500 aa20.36■□□□□ 0.85
Chtop-205ENSMUST00000107343 Ccdc88bQ4QRL3 1481 aa20.35■□□□□ 0.85
Chtop-205ENSMUST00000107343 UbtfP25976 765 aaKnown RBP20.34■□□□□ 0.85
Chtop-205ENSMUST00000107343 Znf710Q3U288 666 aa20.29■□□□□ 0.84
Chtop-205ENSMUST00000107343 Nolc1E9Q5C9 702 aaKnown RBP20.28■□□□□ 0.84
Chtop-205ENSMUST00000107343 Fgd1P52734 960 aa20.23■□□□□ 0.83
Chtop-205ENSMUST00000107343 Ap3b1Q9Z1T1 1105 aa20.21■□□□□ 0.83
Chtop-205ENSMUST00000107343 Crybg2B7ZCC2 1516 aa20.19■□□□□ 0.82
Chtop-205ENSMUST00000107343 Supt16hQ920B9 1047 aa20.18■□□□□ 0.82
Chtop-205ENSMUST00000107343 Golga3P55937 1487 aa20.12■□□□□ 0.81
Chtop-205ENSMUST00000107343 NrdcQ8BHG1 1161 aa20.1■□□□□ 0.81
Chtop-205ENSMUST00000107343 Stra8P70278 393 aa20.1■□□□□ 0.81
Chtop-205ENSMUST00000107343 Upf2A2AT37 1269 aaKnown RBP20.09■□□□□ 0.81
Chtop-205ENSMUST00000107343 Calr4Q3TQS0 420 aa20.09■□□□□ 0.81
Chtop-205ENSMUST00000107343 Ncapd3Q6ZQK0 1506 aa20.07■□□□□ 0.8
Chtop-205ENSMUST00000107343 BicraF8VPZ9 1578 aa20.05■□□□□ 0.8
Chtop-205ENSMUST00000107343 Gtf3c3Q3TMP1 882 aa20.05■□□□□ 0.8
Chtop-205ENSMUST00000107343 Rpap1Q80TE0 1409 aa20.05■□□□□ 0.8
Chtop-205ENSMUST00000107343 Ccdc9Q8VC31 543 aaKnown RBP20.03■□□□□ 0.8
Chtop-205ENSMUST00000107343 Rapgef2Q8CHG7 1496 aa19.99■□□□□ 0.79
Chtop-205ENSMUST00000107343 Pknox2Q8BG99 474 aa19.99■□□□□ 0.79
Chtop-205ENSMUST00000107343 Ccdc27Q3V036 639 aa19.96■□□□□ 0.79
Chtop-205ENSMUST00000107343 Washc2Q6PGL7 1334 aa19.94■□□□□ 0.78
Chtop-205ENSMUST00000107343 Brd4Q9ESU6 1400 aaKnown RBP19.92■□□□□ 0.78
Chtop-205ENSMUST00000107343 Kdm5bQ80Y84 1544 aa19.89■□□□□ 0.78
Chtop-205ENSMUST00000107343 Il27Q8K3I6 234 aa19.88■□□□□ 0.77
Chtop-205ENSMUST00000107343 Plcd4Q8K3R3 807 aa19.88■□□□□ 0.77
Chtop-205ENSMUST00000107343 Irx3P81067 507 aa19.87■□□□□ 0.77
Chtop-205ENSMUST00000107343 Top2bQ64511 1612 aa19.83■□□□□ 0.77
Chtop-205ENSMUST00000107343 Wdr43Q6ZQL4 677 aaKnown RBP19.81■□□□□ 0.76
Chtop-205ENSMUST00000107343 Ppp4r2Q0VGB7 417 aa19.79■□□□□ 0.76
Chtop-205ENSMUST00000107343 Liat1Q810M6 228 aa19.78■□□□□ 0.76
Chtop-205ENSMUST00000107343 Ttbk1Q6PCN3 1308 aa19.78■□□□□ 0.76
Chtop-205ENSMUST00000107343 Egfem1Q8C088 590 aa19.77■□□□□ 0.76
Chtop-205ENSMUST00000107343 Pak3Q61036 559 aa19.76■□□□□ 0.75
Chtop-205ENSMUST00000107343 Cep162Q6ZQ06 1403 aa19.73■□□□□ 0.75
Chtop-205ENSMUST00000107343 Ipo4Q8VI75 1082 aa19.73■□□□□ 0.75
Chtop-205ENSMUST00000107343 Cecr2E9Q2Z1 1453 aa19.71■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms