RNA–Protein interactions for RNA: ENSMUST00000105461.9

Cdh23-202, Transcript of Cadherin-23, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cdh23, Length 11,096 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23-202ENSMUST00000105461 Rpgrip1Q9EPQ2 1331 aa15.2■□□□□ 0.02
Cdh23-202ENSMUST00000105461 Rhox8Q6VSS7 320 aa15.11■□□□□ 0.01
Cdh23-202ENSMUST00000105461 Las1lA2BE28 776 aaKnown RBP14.61□□□□□ -0.07
Cdh23-202ENSMUST00000105461 Cngb1E1AZ71 1325 aa14.57□□□□□ -0.08
Cdh23-202ENSMUST00000105461 Pelp1Q9DBD5 1123 aaKnown RBP14.3□□□□□ -0.12
Cdh23-202ENSMUST00000105461 Ehmt2Q9Z148 1263 aaKnown RBP14.08□□□□□ -0.16
Cdh23-202ENSMUST00000105461 Rtl1Q7M732 1744 aa14.08□□□□□ -0.16
Cdh23-202ENSMUST00000105461 Wdr66E9Q743 1299 aa13.94□□□□□ -0.18
Cdh23-202ENSMUST00000105461 Amer1Q7TS75 1132 aa13.89□□□□□ -0.19
Cdh23-202ENSMUST00000105461 Myt1Q8CFC2 1127 aa13.89□□□□□ -0.19
Cdh23-202ENSMUST00000105461 CenpbP27790 599 aa13.82□□□□□ -0.2
Cdh23-202ENSMUST00000105461 Ccdc180J3QNE4 1664 aa13.77□□□□□ -0.21
Cdh23-202ENSMUST00000105461 Zeb1Q64318 1117 aa13.76□□□□□ -0.21
Cdh23-202ENSMUST00000105461 Acin1Q9JIX8 1338 aaKnown RBP13.52□□□□□ -0.25
Cdh23-202ENSMUST00000105461 NischQ80TM9 1593 aa13.48□□□□□ -0.25
Cdh23-202ENSMUST00000105461 Ube2uB1AUC4 352 aa13.44□□□□□ -0.26
Cdh23-202ENSMUST00000105461 4930567H17RikQ3V0K5 233 aa13.44□□□□□ -0.26
Cdh23-202ENSMUST00000105461 Ttbk1Q6PCN3 1308 aa13.35□□□□□ -0.27
Cdh23-202ENSMUST00000105461 NefmP08553 848 aa13.35□□□□□ -0.27
Cdh23-202ENSMUST00000105461 Stra8P70278 393 aa13.34□□□□□ -0.27
Cdh23-202ENSMUST00000105461 HrcG5E8J6 738 aa13.25□□□□□ -0.29
Cdh23-202ENSMUST00000105461 Ccdc136Q3TVA9 1136 aa13.21□□□□□ -0.29
Cdh23-202ENSMUST00000105461 Gab3Q8BSM5 595 aa13.2□□□□□ -0.3
Cdh23-202ENSMUST00000105461 4933416C03RikQ3V063 378 aa13.19□□□□□ -0.3
Cdh23-202ENSMUST00000105461 Esf1Q3V1V3 845 aaKnown RBP13.12□□□□□ -0.31
Cdh23-202ENSMUST00000105461 Slc24a1Q91WD8 1130 aa13.11□□□□□ -0.31
Cdh23-202ENSMUST00000105461 Cdk11bP24788 784 aaKnown RBP13.09□□□□□ -0.31
Cdh23-202ENSMUST00000105461 Trim41Q5NCC3 630 aa13.09□□□□□ -0.31
Cdh23-202ENSMUST00000105461 DiexfQ8BTT6 772 aaKnown RBP13.05□□□□□ -0.32
Cdh23-202ENSMUST00000105461 Npm2Q80W85 207 aa13.04□□□□□ -0.32
Cdh23-202ENSMUST00000105461 Pcgf6Q99NA9 353 aa13.03□□□□□ -0.32
Cdh23-202ENSMUST00000105461 Rtl5Q5DTT4 599 aa13.03□□□□□ -0.32
Cdh23-202ENSMUST00000105461 Tnnt3Q9QZ47 272 aa13.03□□□□□ -0.32
Cdh23-202ENSMUST00000105461 Myt1lP97500 1187 aa12.98□□□□□ -0.33
Cdh23-202ENSMUST00000105461 UbtfP25976 765 aaKnown RBP12.91□□□□□ -0.34
Cdh23-202ENSMUST00000105461 Nop58Q6DFW4 536 aaKnown RBP12.89□□□□□ -0.35
Cdh23-202ENSMUST00000105461 NeflP08551 543 aa12.87□□□□□ -0.35
Cdh23-202ENSMUST00000105461 Abcc9P70170 1546 aa12.82□□□□□ -0.36
Cdh23-202ENSMUST00000105461 NrdcQ8BHG1 1161 aa12.82□□□□□ -0.36
Cdh23-202ENSMUST00000105461 Dcaf1Q80TR8 1506 aa12.79□□□□□ -0.36
Cdh23-202ENSMUST00000105461 Neurod1Q60867 357 aa12.78□□□□□ -0.36
Cdh23-202ENSMUST00000105461 Eif5bQ05D44 1216 aaKnown RBP12.73□□□□□ -0.37
Cdh23-202ENSMUST00000105461 Anp32bQ9EST5 272 aaKnown RBP12.72□□□□□ -0.37
Cdh23-202ENSMUST00000105461 Supt5hO55201 1082 aaKnown RBP12.71□□□□□ -0.37
Cdh23-202ENSMUST00000105461 Anp32aO35381 247 aa12.6□□□□□ -0.39
Cdh23-202ENSMUST00000105461 NclP09405 707 aaKnown RBP12.6□□□□□ -0.39
Cdh23-202ENSMUST00000105461 DaxxO35613 739 aa12.6□□□□□ -0.39
Cdh23-202ENSMUST00000105461 Ccdc9Q8VC31 543 aaKnown RBP12.59□□□□□ -0.39
Cdh23-202ENSMUST00000105461 Ppargc1bQ8VHJ7 1014 aa12.55□□□□□ -0.4
Cdh23-202ENSMUST00000105461 Aplp2Q06335 707 aa12.5□□□□□ -0.41
Cdh23-202ENSMUST00000105461 TonslQ6NZL6 1363 aa12.49□□□□□ -0.41
Cdh23-202ENSMUST00000105461 Ythdc1E9Q5K9 736 aaKnown RBP12.46□□□□□ -0.41
Cdh23-202ENSMUST00000105461 Anks4bQ8K3X6 423 aa12.46□□□□□ -0.41
Cdh23-202ENSMUST00000105461 Fam50aQ9WV03 339 aaKnown RBP12.44□□□□□ -0.42
Cdh23-202ENSMUST00000105461 ClspnQ80YR7 1315 aa12.42□□□□□ -0.42
Cdh23-202ENSMUST00000105461 Gm35339A0A140LHH9 1649 aa12.37□□□□□ -0.43
Cdh23-202ENSMUST00000105461 Cep164Q5DU05 1446 aa12.36□□□□□ -0.43
Cdh23-202ENSMUST00000105461 CatipB9EKE5 520 aa12.34□□□□□ -0.43
Cdh23-202ENSMUST00000105461 Abcc8B2RUS7 1588 aa12.33□□□□□ -0.44
Cdh23-202ENSMUST00000105461 Gm38655A0A286YDK6 273 aa12.33□□□□□ -0.44
Cdh23-202ENSMUST00000105461 Csrnp3P59055 597 aa12.32□□□□□ -0.44
Cdh23-202ENSMUST00000105461 Os9Q8K2C7 672 aa12.32□□□□□ -0.44
Cdh23-202ENSMUST00000105461 Bcl11aQ9QYE3 773 aa12.31□□□□□ -0.44
Cdh23-202ENSMUST00000105461 Mier1Q5UAK0 511 aa12.28□□□□□ -0.44
Cdh23-202ENSMUST00000105461 1700123L14RikQ3V2K7 440 aa12.28□□□□□ -0.44
Cdh23-202ENSMUST00000105461 Ap3b1Q9Z1T1 1105 aa12.24□□□□□ -0.45
Cdh23-202ENSMUST00000105461 Upf2A2AT37 1269 aaKnown RBP12.18□□□□□ -0.46
Cdh23-202ENSMUST00000105461 ArxO35085 564 aa12.18□□□□□ -0.46
Cdh23-202ENSMUST00000105461 Ccer2J3QPU5 274 aa12.15□□□□□ -0.46
Cdh23-202ENSMUST00000105461 Il27Q8K3I6 234 aa12.15□□□□□ -0.46
Cdh23-202ENSMUST00000105461 Lmod3E9QA62 571 aa12.13□□□□□ -0.47
Cdh23-202ENSMUST00000105461 Hsp90aa1P07901 733 aaKnown RBP12.13□□□□□ -0.47
Cdh23-202ENSMUST00000105461 Calr4Q3TQS0 420 aa12.11□□□□□ -0.47
Cdh23-202ENSMUST00000105461 Brd4Q9ESU6 1400 aaKnown RBP12.1□□□□□ -0.47
Cdh23-202ENSMUST00000105461 Ppp4r2Q0VGB7 417 aa12.07□□□□□ -0.48
Cdh23-202ENSMUST00000105461 Nlrp6Q91WS2 869 aa12.07□□□□□ -0.48
Cdh23-202ENSMUST00000105461 Sall2Q9QX96 1004 aa12.05□□□□□ -0.48
Cdh23-202ENSMUST00000105461 Polr3glQ8R0C0 218 aa12.03□□□□□ -0.48
Cdh23-202ENSMUST00000105461 Zcchc6Q5BLK4 1491 aaKnown RBP12.02□□□□□ -0.49
Cdh23-202ENSMUST00000105461 Wdr43Q6ZQL4 677 aaKnown RBP12.01□□□□□ -0.49
Cdh23-202ENSMUST00000105461 Mapk8ip2Q9ERE9 830 aa12.01□□□□□ -0.49
Cdh23-202ENSMUST00000105461 DekQ7TNV0 380 aaKnown RBP12.01□□□□□ -0.49
Cdh23-202ENSMUST00000105461 Trim44Q9QXA7 346 aa11.97□□□□□ -0.49
Cdh23-202ENSMUST00000105461 Hdac5Q9Z2V6 1113 aa11.95□□□□□ -0.5
Cdh23-202ENSMUST00000105461 Vsig10D3YX43 558 aa11.91□□□□□ -0.5
Cdh23-202ENSMUST00000105461 Fam71e1A1L3C1 212 aa11.9□□□□□ -0.5
Cdh23-202ENSMUST00000105461 Plekhg3Q4VAC9 1341 aa11.89□□□□□ -0.51
Cdh23-202ENSMUST00000105461 Rb1cc1Q9ESK9 1588 aa11.89□□□□□ -0.51
Cdh23-202ENSMUST00000105461 CanxP35564 591 aaKnown RBP11.89□□□□□ -0.51
Cdh23-202ENSMUST00000105461 Ccdc27Q3V036 639 aa11.89□□□□□ -0.51
Cdh23-202ENSMUST00000105461 Zbtb4Q5F293 982 aa11.88□□□□□ -0.51
Cdh23-202ENSMUST00000105461 Chic1Q8CBW7 227 aa11.85□□□□□ -0.51
Cdh23-202ENSMUST00000105461 Zbtb7cQ8VCZ7 619 aa11.85□□□□□ -0.51
Cdh23-202ENSMUST00000105461 Irx3P81067 507 aa11.84□□□□□ -0.51
Cdh23-202ENSMUST00000105461 Hnrnpul2Q00PI9 745 aaKnown RBP11.83□□□□□ -0.52
Cdh23-202ENSMUST00000105461 Eid3Q3V124 375 aa11.83□□□□□ -0.52
Cdh23-202ENSMUST00000105461 Hsp90ab1P11499 724 aaKnown RBP11.83□□□□□ -0.52
Cdh23-202ENSMUST00000105461 Baz1aO88379 1555 aa11.82□□□□□ -0.52
Cdh23-202ENSMUST00000105461 Lmod2Q3UHZ5 550 aa11.82□□□□□ -0.52
Cdh23-202ENSMUST00000105461 Prdm10Q3UTQ7 1184 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms