RNA–Protein interactions for RNA: ENSMUST00000103643.3

Trav8-1-201, Transcript of T cell receptor alpha variable 8-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav8-1, Length 328 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1-201ENSMUST00000103643 Chic1Q8CBW7 227 aa10.42□□□□□ -0.74
Trav8-1-201ENSMUST00000103643 Mapk8ip2Q9ERE9 830 aa10□□□□□ -0.81
Trav8-1-201ENSMUST00000103643 Phf23Q8BSN5 401 aa9.34□□□□□ -0.91
Trav8-1-201ENSMUST00000103643 Plppr3Q7TPB0 716 aa9.08□□□□□ -0.96
Trav8-1-201ENSMUST00000103643 Gab3Q8BSM5 595 aa8.98□□□□□ -0.97
Trav8-1-201ENSMUST00000103643 Ube2uB1AUC4 352 aa8.7□□□□□ -1.02
Trav8-1-201ENSMUST00000103643 Senp3Q9EP97 568 aaKnown RBP8.6□□□□□ -1.03
Trav8-1-201ENSMUST00000103643 Kcna4Q61423 654 aa8.33□□□□□ -1.08
Trav8-1-201ENSMUST00000103643 CatipB9EKE5 520 aa7.67□□□□□ -1.18
Trav8-1-201ENSMUST00000103643 DiexfQ8BTT6 772 aaKnown RBP7.64□□□□□ -1.19
Trav8-1-201ENSMUST00000103643 Hoxd11P23813 323 aa7.6□□□□□ -1.19
Trav8-1-201ENSMUST00000103643 Ehmt2Q9Z148 1263 aaKnown RBP7.58□□□□□ -1.2
Trav8-1-201ENSMUST00000103643 Trap1aP19473 224 aa7.56□□□□□ -1.2
Trav8-1-201ENSMUST00000103643 Dmrt2Q8BG36 561 aa7.49□□□□□ -1.21
Trav8-1-201ENSMUST00000103643 Ttbk1Q6PCN3 1308 aa7.35□□□□□ -1.23
Trav8-1-201ENSMUST00000103643 Vsig10D3YX43 558 aa7.33□□□□□ -1.24
Trav8-1-201ENSMUST00000103643 Fam163aQ8CAA5 168 aa7.33□□□□□ -1.24
Trav8-1-201ENSMUST00000103643 Ppargc1bQ8VHJ7 1014 aa7.33□□□□□ -1.24
Trav8-1-201ENSMUST00000103643 ArxO35085 564 aa7.29□□□□□ -1.24
Trav8-1-201ENSMUST00000103643 Znf219Q6IQX8 726 aa7.27□□□□□ -1.25
Trav8-1-201ENSMUST00000103643 Fam71e1A1L3C1 212 aa7.25□□□□□ -1.25
Trav8-1-201ENSMUST00000103643 Slc4a1apE9PX68 744 aa7.21□□□□□ -1.26
Trav8-1-201ENSMUST00000103643 Taok2Q6ZQ29 1240 aa7.21□□□□□ -1.26
Trav8-1-201ENSMUST00000103643 Dnajc5bQ9CQ94 199 aa7.21□□□□□ -1.26
Trav8-1-201ENSMUST00000103643 Chrna2Q91X60 512 aa7.16□□□□□ -1.26
Trav8-1-201ENSMUST00000103643 Pelp1Q9DBD5 1123 aaKnown RBP7.13□□□□□ -1.27
Trav8-1-201ENSMUST00000103643 Rsph4aQ8BYM7 716 aa7.09□□□□□ -1.27
Trav8-1-201ENSMUST00000103643 Arid3aQ62431 601 aa7.07□□□□□ -1.28
Trav8-1-201ENSMUST00000103643 Rtn4Q99P72 1162 aaKnown RBP7.07□□□□□ -1.28
Trav8-1-201ENSMUST00000103643 Atf5O70191 283 aa7.04□□□□□ -1.28
Trav8-1-201ENSMUST00000103643 Amer1Q7TS75 1132 aa7.03□□□□□ -1.28
Trav8-1-201ENSMUST00000103643 Prdm10Q3UTQ7 1184 aa7.02□□□□□ -1.29
Trav8-1-201ENSMUST00000103643 Npm2Q80W85 207 aa7.01□□□□□ -1.29
Trav8-1-201ENSMUST00000103643 Hs6st3Q9QYK4 470 aa7.01□□□□□ -1.29
Trav8-1-201ENSMUST00000103643 Rimbp2Q80U40 1072 aa7□□□□□ -1.29
Trav8-1-201ENSMUST00000103643 AcrbpQ3V140 540 aa6.98□□□□□ -1.29
Trav8-1-201ENSMUST00000103643 Ppp4r2Q0VGB7 417 aa6.96□□□□□ -1.3
Trav8-1-201ENSMUST00000103643 4930567H17RikQ3V0K5 233 aa6.93□□□□□ -1.3
Trav8-1-201ENSMUST00000103643 Ripply1Q2WG77 201 aa6.9□□□□□ -1.3
Trav8-1-201ENSMUST00000103643 Prdm16A2A935 1275 aa6.89□□□□□ -1.31
Trav8-1-201ENSMUST00000103643 Ecm2Q5FW85 670 aa6.89□□□□□ -1.31
Trav8-1-201ENSMUST00000103643 Akt1s1Q9D1F4 257 aa6.87□□□□□ -1.31
Trav8-1-201ENSMUST00000103643 Aplp2Q06335 707 aa6.84□□□□□ -1.31
Trav8-1-201ENSMUST00000103643 4933416C03RikQ3V063 378 aa6.83□□□□□ -1.32
Trav8-1-201ENSMUST00000103643 Rhox8Q6VSS7 320 aa6.83□□□□□ -1.32
Trav8-1-201ENSMUST00000103643 ArsiQ32KI9 573 aa6.81□□□□□ -1.32
Trav8-1-201ENSMUST00000103643 Pde4cQ3UEI1 686 aa6.81□□□□□ -1.32
Trav8-1-201ENSMUST00000103643 1700123L14RikQ3V2K7 440 aa6.8□□□□□ -1.32
Trav8-1-201ENSMUST00000103643 Slc34a2Q9DBP0 697 aa6.8□□□□□ -1.32
Trav8-1-201ENSMUST00000103643 Prm3Q62100 101 aa6.79□□□□□ -1.32
Trav8-1-201ENSMUST00000103643 Nlrp6Q91WS2 869 aa6.79□□□□□ -1.32
Trav8-1-201ENSMUST00000103643 UbtfP25976 765 aaKnown RBP6.74□□□□□ -1.33
Trav8-1-201ENSMUST00000103643 Os9Q8K2C7 672 aa6.73□□□□□ -1.33
Trav8-1-201ENSMUST00000103643 Ncbp3Q8BZR9 615 aaKnown RBP6.72□□□□□ -1.33
Trav8-1-201ENSMUST00000103643 Q8BT18 775 aa6.69□□□□□ -1.34
Trav8-1-201ENSMUST00000103643 Bach1P97302 739 aa6.67□□□□□ -1.34
Trav8-1-201ENSMUST00000103643 Sox12Q04890 314 aa6.65□□□□□ -1.34
Trav8-1-201ENSMUST00000103643 Bcl11aQ9QYE3 773 aa6.65□□□□□ -1.34
Trav8-1-201ENSMUST00000103643 Tshz2Q68FE9 1030 aa6.62□□□□□ -1.35
Trav8-1-201ENSMUST00000103643 Zbtb7cQ8VCZ7 619 aa6.61□□□□□ -1.35
Trav8-1-201ENSMUST00000103643 Cdca7Q9D0M2 382 aa6.58□□□□□ -1.36
Trav8-1-201ENSMUST00000103643 C1qtnf12Q8R2Z0 308 aa6.56□□□□□ -1.36
Trav8-1-201ENSMUST00000103643 Fbxo3Q9DC63 480 aa6.55□□□□□ -1.36
Trav8-1-201ENSMUST00000103643 Ubap1lG3UW59 384 aa6.5□□□□□ -1.37
Trav8-1-201ENSMUST00000103643 WdpcpQ8C456 722 aa6.5□□□□□ -1.37
Trav8-1-201ENSMUST00000103643 Myt1Q8CFC2 1127 aa6.48□□□□□ -1.37
Trav8-1-201ENSMUST00000103643 Esf1Q3V1V3 845 aaKnown RBP6.42□□□□□ -1.38
Trav8-1-201ENSMUST00000103643 Riok3Q9DBU3 519 aaKnown RBP6.4□□□□□ -1.38
Trav8-1-201ENSMUST00000103643 Cnksr2Q80YA9 1032 aa6.39□□□□□ -1.39
Trav8-1-201ENSMUST00000103643 Styxl1Q9DAR2 321 aa6.39□□□□□ -1.39
Trav8-1-201ENSMUST00000103643 Slc24a1Q91WD8 1130 aa6.38□□□□□ -1.39
Trav8-1-201ENSMUST00000103643 Gm13697A2AK42 830 aa6.37□□□□□ -1.39
Trav8-1-201ENSMUST00000103643 Spryd3E9Q9B3 442 aa6.37□□□□□ -1.39
Trav8-1-201ENSMUST00000103643 Trim41Q5NCC3 630 aa6.35□□□□□ -1.39
Trav8-1-201ENSMUST00000103643 MyclP10166 368 aa6.34□□□□□ -1.39
Trav8-1-201ENSMUST00000103643 BccipQ9CWI3 316 aa6.34□□□□□ -1.39
Trav8-1-201ENSMUST00000103643 Znf326O88291 580 aa6.33□□□□□ -1.4
Trav8-1-201ENSMUST00000103643 Cdk11bP24788 784 aaKnown RBP6.33□□□□□ -1.4
Trav8-1-201ENSMUST00000103643 Hmgb1P63158 215 aaKnown RBP6.33□□□□□ -1.4
Trav8-1-201ENSMUST00000103643 Tmem132aQ922P8 1018 aa6.33□□□□□ -1.4
Trav8-1-201ENSMUST00000103643 Dnajc5P60904 198 aa6.32□□□□□ -1.4
Trav8-1-201ENSMUST00000103643 Rad21Q61550 635 aaKnown RBP6.32□□□□□ -1.4
Trav8-1-201ENSMUST00000103643 Skida1Q80YR3 822 aa6.29□□□□□ -1.4
Trav8-1-201ENSMUST00000103643 PrkcshO08795 521 aa6.28□□□□□ -1.4
Trav8-1-201ENSMUST00000103643 Ms4a5Q810P8 197 aa6.28□□□□□ -1.4
Trav8-1-201ENSMUST00000103643 Ifnlr1Q8CGK5 535 aa6.28□□□□□ -1.4
Trav8-1-201ENSMUST00000103643 Gtf3c5Q8R2T8 520 aa6.27□□□□□ -1.41
Trav8-1-201ENSMUST00000103643 G430095P16RikE9Q913 147 aa6.26□□□□□ -1.41
Trav8-1-201ENSMUST00000103643 Zeb1Q64318 1117 aa6.25□□□□□ -1.41
Trav8-1-201ENSMUST00000103643 Egfem1Q8C088 590 aa6.24□□□□□ -1.41
Trav8-1-201ENSMUST00000103643 Gtf3c3Q3TMP1 882 aa6.23□□□□□ -1.41
Trav8-1-201ENSMUST00000103643 Zbtb12Q9Z150 459 aa6.23□□□□□ -1.41
Trav8-1-201ENSMUST00000103643 Zbtb7aO88939 569 aaKnown RBP6.22□□□□□ -1.41
Trav8-1-201ENSMUST00000103643 NclP09405 707 aaKnown RBP6.22□□□□□ -1.41
Trav8-1-201ENSMUST00000103643 Stag3O70576 1240 aa6.21□□□□□ -1.42
Trav8-1-201ENSMUST00000103643 Ythdc1E9Q5K9 736 aaKnown RBP6.2□□□□□ -1.42
Trav8-1-201ENSMUST00000103643 Scaf1Q5U4C3 1256 aaKnown RBP6.19□□□□□ -1.42
Trav8-1-201ENSMUST00000103643 Plcd4Q8K3R3 807 aa6.19□□□□□ -1.42
Trav8-1-201ENSMUST00000103643 HrcG5E8J6 738 aa6.18□□□□□ -1.42
Trav8-1-201ENSMUST00000103643 Rnf216P58283 853 aa6.18□□□□□ -1.42
Retrieved 100 of 22,080 RNA–protein pairs in 241.8 ms