RNA–Protein interactions for RNA: ENSMUST00000101164.10

Limch1-202, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Limch1, Length 5,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-202ENSMUST00000101164 Rhox8Q6VSS7 320 aa17.4■□□□□ 0.38
Limch1-202ENSMUST00000101164 Rpgrip1Q9EPQ2 1331 aa16.37■□□□□ 0.21
Limch1-202ENSMUST00000101164 Las1lA2BE28 776 aaKnown RBP16.19■□□□□ 0.18
Limch1-202ENSMUST00000101164 Cngb1E1AZ71 1325 aa15.95■□□□□ 0.14
Limch1-202ENSMUST00000101164 NischQ80TM9 1593 aa15.77■□□□□ 0.11
Limch1-202ENSMUST00000101164 Esf1Q3V1V3 845 aaKnown RBP15.64■□□□□ 0.09
Limch1-202ENSMUST00000101164 Pelp1Q9DBD5 1123 aaKnown RBP15.54■□□□□ 0.08
Limch1-202ENSMUST00000101164 Amer1Q7TS75 1132 aa15.53■□□□□ 0.08
Limch1-202ENSMUST00000101164 Ccdc136Q3TVA9 1136 aa15.5■□□□□ 0.07
Limch1-202ENSMUST00000101164 Myt1Q8CFC2 1127 aa15.49■□□□□ 0.07
Limch1-202ENSMUST00000101164 CenpbP27790 599 aa15.29■□□□□ 0.04
Limch1-202ENSMUST00000101164 Trim41Q5NCC3 630 aa15.27■□□□□ 0.04
Limch1-202ENSMUST00000101164 Zeb1Q64318 1117 aa15.24■□□□□ 0.03
Limch1-202ENSMUST00000101164 Abcc9P70170 1546 aa15.21■□□□□ 0.03
Limch1-202ENSMUST00000101164 DiexfQ8BTT6 772 aaKnown RBP15.1■□□□□ 0.01
Limch1-202ENSMUST00000101164 Npm2Q80W85 207 aa15.06■□□□□ 0
Limch1-202ENSMUST00000101164 Gab3Q8BSM5 595 aa14.93□□□□□ -0.02
Limch1-202ENSMUST00000101164 Ehmt2Q9Z148 1263 aaKnown RBP14.9□□□□□ -0.02
Limch1-202ENSMUST00000101164 Gm35339A0A140LHH9 1649 aa14.89□□□□□ -0.03
Limch1-202ENSMUST00000101164 Ube2uB1AUC4 352 aa14.83□□□□□ -0.04
Limch1-202ENSMUST00000101164 Myt1lP97500 1187 aa14.81□□□□□ -0.04
Limch1-202ENSMUST00000101164 Il27Q8K3I6 234 aa14.79□□□□□ -0.04
Limch1-202ENSMUST00000101164 Wdr66E9Q743 1299 aa14.78□□□□□ -0.04
Limch1-202ENSMUST00000101164 4930567H17RikQ3V0K5 233 aa14.7□□□□□ -0.06
Limch1-202ENSMUST00000101164 Zcchc6Q5BLK4 1491 aaKnown RBP14.69□□□□□ -0.06
Limch1-202ENSMUST00000101164 Acin1Q9JIX8 1338 aaKnown RBP14.66□□□□□ -0.06
Limch1-202ENSMUST00000101164 Pcgf6Q99NA9 353 aa14.56□□□□□ -0.08
Limch1-202ENSMUST00000101164 Ttbk1Q6PCN3 1308 aa14.52□□□□□ -0.08
Limch1-202ENSMUST00000101164 Abcc8B2RUS7 1588 aa14.5□□□□□ -0.09
Limch1-202ENSMUST00000101164 Npm1Q61937 292 aaKnown RBP14.42□□□□□ -0.1
Limch1-202ENSMUST00000101164 Rtl5Q5DTT4 599 aa14.39□□□□□ -0.11
Limch1-202ENSMUST00000101164 4933416C03RikQ3V063 378 aa14.36□□□□□ -0.11
Limch1-202ENSMUST00000101164 Cdk11bP24788 784 aaKnown RBP14.28□□□□□ -0.12
Limch1-202ENSMUST00000101164 Stra8P70278 393 aa14.25□□□□□ -0.13
Limch1-202ENSMUST00000101164 NefmP08553 848 aa14.2□□□□□ -0.14
Limch1-202ENSMUST00000101164 Tnnt3Q9QZ47 272 aa14.18□□□□□ -0.14
Limch1-202ENSMUST00000101164 UbtfP25976 765 aaKnown RBP14.15□□□□□ -0.14
Limch1-202ENSMUST00000101164 Ubl4bQ9CQ84 188 aa14.15□□□□□ -0.14
Limch1-202ENSMUST00000101164 HrcG5E8J6 738 aa14.1□□□□□ -0.15
Limch1-202ENSMUST00000101164 Ap3b1Q9Z1T1 1105 aa14.09□□□□□ -0.15
Limch1-202ENSMUST00000101164 Ifnlr1Q8CGK5 535 aa14.03□□□□□ -0.16
Limch1-202ENSMUST00000101164 Ythdc1E9Q5K9 736 aaKnown RBP14.02□□□□□ -0.16
Limch1-202ENSMUST00000101164 Nop58Q6DFW4 536 aaKnown RBP14.02□□□□□ -0.16
Limch1-202ENSMUST00000101164 Supt5hO55201 1082 aaKnown RBP13.98□□□□□ -0.17
Limch1-202ENSMUST00000101164 NacadQ5SWP3 1504 aa13.98□□□□□ -0.17
Limch1-202ENSMUST00000101164 Fam50aQ9WV03 339 aaKnown RBP13.96□□□□□ -0.17
Limch1-202ENSMUST00000101164 Brd4Q9ESU6 1400 aaKnown RBP13.95□□□□□ -0.18
Limch1-202ENSMUST00000101164 Bcl11aQ9QYE3 773 aa13.91□□□□□ -0.18
Limch1-202ENSMUST00000101164 Ccdc180J3QNE4 1664 aa13.89□□□□□ -0.19
Limch1-202ENSMUST00000101164 Gm13697A2AK42 830 aa13.88□□□□□ -0.19
Limch1-202ENSMUST00000101164 Aplp2Q06335 707 aa13.87□□□□□ -0.19
Limch1-202ENSMUST00000101164 Neurod1Q60867 357 aa13.87□□□□□ -0.19
Limch1-202ENSMUST00000101164 Os9Q8K2C7 672 aa13.87□□□□□ -0.19
Limch1-202ENSMUST00000101164 Fkbp15Q6P9Q6 1216 aaKnown RBP13.84□□□□□ -0.19
Limch1-202ENSMUST00000101164 Anp32aO35381 247 aa13.84□□□□□ -0.19
Limch1-202ENSMUST00000101164 Rb1cc1Q9ESK9 1588 aa13.83□□□□□ -0.2
Limch1-202ENSMUST00000101164 Plppr3Q7TPB0 716 aa13.81□□□□□ -0.2
Limch1-202ENSMUST00000101164 NclP09405 707 aaKnown RBP13.81□□□□□ -0.2
Limch1-202ENSMUST00000101164 Lmod2Q3UHZ5 550 aa13.79□□□□□ -0.2
Limch1-202ENSMUST00000101164 Rtl1Q7M732 1744 aa13.78□□□□□ -0.2
Limch1-202ENSMUST00000101164 Zbtb7cQ8VCZ7 619 aa13.76□□□□□ -0.21
Limch1-202ENSMUST00000101164 Hnrnpul2Q00PI9 745 aaKnown RBP13.76□□□□□ -0.21
Limch1-202ENSMUST00000101164 Slc24a1Q91WD8 1130 aa13.75□□□□□ -0.21
Limch1-202ENSMUST00000101164 Ercc6F8VPZ5 1481 aa13.75□□□□□ -0.21
Limch1-202ENSMUST00000101164 Anks4bQ8K3X6 423 aa13.75□□□□□ -0.21
Limch1-202ENSMUST00000101164 DaxxO35613 739 aa13.74□□□□□ -0.21
Limch1-202ENSMUST00000101164 Ccdc9Q8VC31 543 aaKnown RBP13.74□□□□□ -0.21
Limch1-202ENSMUST00000101164 Csrnp3P59055 597 aa13.73□□□□□ -0.21
Limch1-202ENSMUST00000101164 Rsf1E9PWW9 1441 aaKnown RBP13.62□□□□□ -0.23
Limch1-202ENSMUST00000101164 Kif15Q6P9L6 1387 aa13.62□□□□□ -0.23
Limch1-202ENSMUST00000101164 Anp32bQ9EST5 272 aaKnown RBP13.61□□□□□ -0.23
Limch1-202ENSMUST00000101164 Gm13695A2AK44 830 aa13.59□□□□□ -0.23
Limch1-202ENSMUST00000101164 1700123L14RikQ3V2K7 440 aa13.59□□□□□ -0.23
Limch1-202ENSMUST00000101164 Pds5bQ4VA53 1446 aaKnown RBP13.57□□□□□ -0.24
Limch1-202ENSMUST00000101164 NeflP08551 543 aa13.57□□□□□ -0.24
Limch1-202ENSMUST00000101164 Plekhg3Q4VAC9 1341 aa13.57□□□□□ -0.24
Limch1-202ENSMUST00000101164 Gm38655A0A286YDK6 273 aa13.55□□□□□ -0.24
Limch1-202ENSMUST00000101164 Kdm5dQ62240 1548 aa13.54□□□□□ -0.24
Limch1-202ENSMUST00000101164 Atp1b4Q99ME6 356 aa13.54□□□□□ -0.24
Limch1-202ENSMUST00000101164 Safb2Q80YR5 991 aaKnown RBP13.53□□□□□ -0.24
Limch1-202ENSMUST00000101164 Erich6D3Z6S9 713 aa13.53□□□□□ -0.24
Limch1-202ENSMUST00000101164 Baz1aO88379 1555 aa13.51□□□□□ -0.25
Limch1-202ENSMUST00000101164 Eif5bQ05D44 1216 aaKnown RBP13.48□□□□□ -0.25
Limch1-202ENSMUST00000101164 Chic1Q8CBW7 227 aa13.47□□□□□ -0.25
Limch1-202ENSMUST00000101164 NrdcQ8BHG1 1161 aa13.47□□□□□ -0.25
Limch1-202ENSMUST00000101164 Hdac5Q9Z2V6 1113 aa13.46□□□□□ -0.25
Limch1-202ENSMUST00000101164 Cep164Q5DU05 1446 aa13.45□□□□□ -0.26
Limch1-202ENSMUST00000101164 Dcaf1Q80TR8 1506 aa13.45□□□□□ -0.26
Limch1-202ENSMUST00000101164 Ccdc18Q640L5 1455 aa13.45□□□□□ -0.26
Limch1-202ENSMUST00000101164 Hsp90aa1P07901 733 aaKnown RBP13.44□□□□□ -0.26
Limch1-202ENSMUST00000101164 Clip1Q922J3 1391 aa13.43□□□□□ -0.26
Limch1-202ENSMUST00000101164 Ppargc1bQ8VHJ7 1014 aa13.38□□□□□ -0.27
Limch1-202ENSMUST00000101164 Arhgap27A2AB59 869 aa13.36□□□□□ -0.27
Limch1-202ENSMUST00000101164 ClspnQ80YR7 1315 aa13.35□□□□□ -0.27
Limch1-202ENSMUST00000101164 Fam71e1A1L3C1 212 aa13.33□□□□□ -0.28
Limch1-202ENSMUST00000101164 Irx3P81067 507 aa13.32□□□□□ -0.28
Limch1-202ENSMUST00000101164 Pknox2Q8BG99 474 aa13.31□□□□□ -0.28
Limch1-202ENSMUST00000101164 Sycp2Q9CUU3 1500 aa13.29□□□□□ -0.28
Limch1-202ENSMUST00000101164 Clstn2Q9ER65 966 aa13.29□□□□□ -0.28
Limch1-202ENSMUST00000101164 Golga3P55937 1487 aa13.29□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 62.4 ms