RNA–Protein interactions for RNA: ENSMUST00000090134.11

Pdlim5-203, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-203ENSMUST00000090134 Chic1Q8CBW7 227 aa18.37■□□□□ 0.53
Pdlim5-203ENSMUST00000090134 Mapk8ip2Q9ERE9 830 aa18.17■□□□□ 0.5
Pdlim5-203ENSMUST00000090134 Phf23Q8BSN5 401 aa16.52■□□□□ 0.24
Pdlim5-203ENSMUST00000090134 Plppr3Q7TPB0 716 aa15.8■□□□□ 0.12
Pdlim5-203ENSMUST00000090134 Gab3Q8BSM5 595 aa15.77■□□□□ 0.12
Pdlim5-203ENSMUST00000090134 Ube2uB1AUC4 352 aa15.45■□□□□ 0.06
Pdlim5-203ENSMUST00000090134 Senp3Q9EP97 568 aaKnown RBP15.06■□□□□ 0
Pdlim5-203ENSMUST00000090134 NischQ80TM9 1593 aa14.64□□□□□ -0.07
Pdlim5-203ENSMUST00000090134 Gm35339A0A140LHH9 1649 aa14.61□□□□□ -0.07
Pdlim5-203ENSMUST00000090134 DiexfQ8BTT6 772 aaKnown RBP14.41□□□□□ -0.1
Pdlim5-203ENSMUST00000090134 Abcc9P70170 1546 aa14.29□□□□□ -0.12
Pdlim5-203ENSMUST00000090134 Kcna4Q61423 654 aa14.28□□□□□ -0.12
Pdlim5-203ENSMUST00000090134 CatipB9EKE5 520 aa14.02□□□□□ -0.16
Pdlim5-203ENSMUST00000090134 Abcc8B2RUS7 1588 aa13.96□□□□□ -0.17
Pdlim5-203ENSMUST00000090134 Ttbk1Q6PCN3 1308 aa13.88□□□□□ -0.19
Pdlim5-203ENSMUST00000090134 Ehmt2Q9Z148 1263 aaKnown RBP13.84□□□□□ -0.19
Pdlim5-203ENSMUST00000090134 Fam163aQ8CAA5 168 aa13.59□□□□□ -0.23
Pdlim5-203ENSMUST00000090134 ArxO35085 564 aa13.59□□□□□ -0.23
Pdlim5-203ENSMUST00000090134 Trap1aP19473 224 aa13.36□□□□□ -0.27
Pdlim5-203ENSMUST00000090134 Rtl1Q7M732 1744 aa13.35□□□□□ -0.27
Pdlim5-203ENSMUST00000090134 Hoxd11P23813 323 aa13.3□□□□□ -0.28
Pdlim5-203ENSMUST00000090134 Rhox8Q6VSS7 320 aa13.2□□□□□ -0.3
Pdlim5-203ENSMUST00000090134 Dcaf1Q80TR8 1506 aa13.13□□□□□ -0.31
Pdlim5-203ENSMUST00000090134 Ppargc1bQ8VHJ7 1014 aa13.13□□□□□ -0.31
Pdlim5-203ENSMUST00000090134 GapdhsQ64467 440 aa13.07□□□□□ -0.32
Pdlim5-203ENSMUST00000090134 ScribQ80U72 1612 aa13.05□□□□□ -0.32
Pdlim5-203ENSMUST00000090134 Ccdc180J3QNE4 1664 aa12.99□□□□□ -0.33
Pdlim5-203ENSMUST00000090134 Vsig10D3YX43 558 aa12.93□□□□□ -0.34
Pdlim5-203ENSMUST00000090134 Arid3aQ62431 601 aa12.93□□□□□ -0.34
Pdlim5-203ENSMUST00000090134 Taok2Q6ZQ29 1240 aa12.88□□□□□ -0.35
Pdlim5-203ENSMUST00000090134 Znf219Q6IQX8 726 aa12.86□□□□□ -0.35
Pdlim5-203ENSMUST00000090134 Rb1cc1Q9ESK9 1588 aa12.83□□□□□ -0.36
Pdlim5-203ENSMUST00000090134 Aplp2Q06335 707 aa12.82□□□□□ -0.36
Pdlim5-203ENSMUST00000090134 Bcl11aQ9QYE3 773 aa12.8□□□□□ -0.36
Pdlim5-203ENSMUST00000090134 Kdm5dQ62240 1548 aa12.78□□□□□ -0.36
Pdlim5-203ENSMUST00000090134 Zcchc6Q5BLK4 1491 aaKnown RBP12.78□□□□□ -0.36
Pdlim5-203ENSMUST00000090134 Slc4a1apE9PX68 744 aa12.77□□□□□ -0.36
Pdlim5-203ENSMUST00000090134 Fam71e1A1L3C1 212 aa12.74□□□□□ -0.37
Pdlim5-203ENSMUST00000090134 Dmrt2Q8BG36 561 aa12.72□□□□□ -0.37
Pdlim5-203ENSMUST00000090134 NacadQ5SWP3 1504 aa12.72□□□□□ -0.37
Pdlim5-203ENSMUST00000090134 Baz1aO88379 1555 aa12.71□□□□□ -0.37
Pdlim5-203ENSMUST00000090134 Prdm16A2A935 1275 aa12.71□□□□□ -0.37
Pdlim5-203ENSMUST00000090134 Amer1Q7TS75 1132 aa12.71□□□□□ -0.38
Pdlim5-203ENSMUST00000090134 UbtfP25976 765 aaKnown RBP12.68□□□□□ -0.38
Pdlim5-203ENSMUST00000090134 Chrna2Q91X60 512 aa12.67□□□□□ -0.38
Pdlim5-203ENSMUST00000090134 Prdm10Q3UTQ7 1184 aa12.66□□□□□ -0.38
Pdlim5-203ENSMUST00000090134 Pelp1Q9DBD5 1123 aaKnown RBP12.58□□□□□ -0.4
Pdlim5-203ENSMUST00000090134 Crybg2B7ZCC2 1516 aa12.58□□□□□ -0.4
Pdlim5-203ENSMUST00000090134 Rsph4aQ8BYM7 716 aa12.57□□□□□ -0.4
Pdlim5-203ENSMUST00000090134 Ncbp3Q8BZR9 615 aaKnown RBP12.57□□□□□ -0.4
Pdlim5-203ENSMUST00000090134 Q8BT18 775 aa12.55□□□□□ -0.4
Pdlim5-203ENSMUST00000090134 ArsiQ32KI9 573 aa12.52□□□□□ -0.41
Pdlim5-203ENSMUST00000090134 4930567H17RikQ3V0K5 233 aa12.48□□□□□ -0.41
Pdlim5-203ENSMUST00000090134 Myt1Q8CFC2 1127 aa12.48□□□□□ -0.41
Pdlim5-203ENSMUST00000090134 Sycp2Q9CUU3 1500 aa12.44□□□□□ -0.42
Pdlim5-203ENSMUST00000090134 Smarca2Q6DIC0 1577 aa12.43□□□□□ -0.42
Pdlim5-203ENSMUST00000090134 Npm2Q80W85 207 aa12.42□□□□□ -0.42
Pdlim5-203ENSMUST00000090134 Rimbp2Q80U40 1072 aa12.4□□□□□ -0.42
Pdlim5-203ENSMUST00000090134 Ripply1Q2WG77 201 aa12.36□□□□□ -0.43
Pdlim5-203ENSMUST00000090134 HrcG5E8J6 738 aa12.29□□□□□ -0.44
Pdlim5-203ENSMUST00000090134 Ecm2Q5FW85 670 aa12.23□□□□□ -0.45
Pdlim5-203ENSMUST00000090134 Ccdc136Q3TVA9 1136 aa12.22□□□□□ -0.45
Pdlim5-203ENSMUST00000090134 Gtf3c5Q8R2T8 520 aa12.2□□□□□ -0.46
Pdlim5-203ENSMUST00000090134 Atf5O70191 283 aa12.18□□□□□ -0.46
Pdlim5-203ENSMUST00000090134 BccipQ9CWI3 316 aa12.17□□□□□ -0.46
Pdlim5-203ENSMUST00000090134 Akt1s1Q9D1F4 257 aa12.17□□□□□ -0.46
Pdlim5-203ENSMUST00000090134 BicraF8VPZ9 1578 aa12.15□□□□□ -0.47
Pdlim5-203ENSMUST00000090134 Trim41Q5NCC3 630 aa12.14□□□□□ -0.47
Pdlim5-203ENSMUST00000090134 Dnajc5bQ9CQ94 199 aa12.14□□□□□ -0.47
Pdlim5-203ENSMUST00000090134 Os9Q8K2C7 672 aa12.13□□□□□ -0.47
Pdlim5-203ENSMUST00000090134 AcrbpQ3V140 540 aa12.1□□□□□ -0.47
Pdlim5-203ENSMUST00000090134 Brd4Q9ESU6 1400 aaKnown RBP12.08□□□□□ -0.48
Pdlim5-203ENSMUST00000090134 Ppp4r2Q0VGB7 417 aa12.06□□□□□ -0.48
Pdlim5-203ENSMUST00000090134 Rtn4Q99P72 1162 aaKnown RBP12.06□□□□□ -0.48
Pdlim5-203ENSMUST00000090134 TimelessQ9R1X4 1197 aa12.05□□□□□ -0.48
Pdlim5-203ENSMUST00000090134 Hs6st3Q9QYK4 470 aa12.03□□□□□ -0.48
Pdlim5-203ENSMUST00000090134 Cecr2E9Q2Z1 1453 aa12.02□□□□□ -0.49
Pdlim5-203ENSMUST00000090134 Cep164Q5DU05 1446 aa12□□□□□ -0.49
Pdlim5-203ENSMUST00000090134 Rpgrip1Q9EPQ2 1331 aa11.98□□□□□ -0.49
Pdlim5-203ENSMUST00000090134 PrkcshO08795 521 aa11.97□□□□□ -0.49
Pdlim5-203ENSMUST00000090134 Pde4cQ3UEI1 686 aa11.97□□□□□ -0.49
Pdlim5-203ENSMUST00000090134 Zbtb7cQ8VCZ7 619 aa11.97□□□□□ -0.49
Pdlim5-203ENSMUST00000090134 Synj1Q8CHC4 1574 aa11.96□□□□□ -0.49
Pdlim5-203ENSMUST00000090134 Cttnbp2B9EJA2 1648 aa11.92□□□□□ -0.5
Pdlim5-203ENSMUST00000090134 Eif5bQ05D44 1216 aaKnown RBP11.91□□□□□ -0.5
Pdlim5-203ENSMUST00000090134 CftrP26361 1476 aa11.91□□□□□ -0.5
Pdlim5-203ENSMUST00000090134 Golga3P55937 1487 aa11.91□□□□□ -0.5
Pdlim5-203ENSMUST00000090134 4933416C03RikQ3V063 378 aa11.89□□□□□ -0.51
Pdlim5-203ENSMUST00000090134 Smarca4Q3TKT4 1613 aaKnown RBP11.89□□□□□ -0.51
Pdlim5-203ENSMUST00000090134 Slc34a2Q9DBP0 697 aa11.87□□□□□ -0.51
Pdlim5-203ENSMUST00000090134 Znf326O88291 580 aa11.86□□□□□ -0.51
Pdlim5-203ENSMUST00000090134 Top2bQ64511 1612 aa11.85□□□□□ -0.51
Pdlim5-203ENSMUST00000090134 Fbxo3Q9DC63 480 aa11.85□□□□□ -0.51
Pdlim5-203ENSMUST00000090134 Tshz2Q68FE9 1030 aa11.83□□□□□ -0.52
Pdlim5-203ENSMUST00000090134 Cdk11bP24788 784 aaKnown RBP11.83□□□□□ -0.52
Pdlim5-203ENSMUST00000090134 Rsf1E9PWW9 1441 aaKnown RBP11.82□□□□□ -0.52
Pdlim5-203ENSMUST00000090134 Ube2q2Q8K2Z8 378 aa11.79□□□□□ -0.52
Pdlim5-203ENSMUST00000090134 Acin1Q9JIX8 1338 aaKnown RBP11.77□□□□□ -0.53
Pdlim5-203ENSMUST00000090134 Ccdc88bQ4QRL3 1481 aa11.74□□□□□ -0.53
Pdlim5-203ENSMUST00000090134 Cngb1E1AZ71 1325 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms