RNA–Protein interactions for RNA: ENSMUST00000088407.3

Khdc1a-201, Transcript of KH homology domain-containing protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Khdc1a, Length 1,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1a-201ENSMUST00000088407 Chic1Q8CBW7 227 aa21.68■■□□□ 1.06
Khdc1a-201ENSMUST00000088407 Mapk8ip2Q9ERE9 830 aa21.46■■□□□ 1.03
Khdc1a-201ENSMUST00000088407 Phf23Q8BSN5 401 aa19.25■□□□□ 0.67
Khdc1a-201ENSMUST00000088407 Gab3Q8BSM5 595 aa18.48■□□□□ 0.55
Khdc1a-201ENSMUST00000088407 Plppr3Q7TPB0 716 aa18.41■□□□□ 0.54
Khdc1a-201ENSMUST00000088407 Senp3Q9EP97 568 aaKnown RBP17.55■□□□□ 0.4
Khdc1a-201ENSMUST00000088407 Gm35339A0A140LHH9 1649 aa16.73■□□□□ 0.27
Khdc1a-201ENSMUST00000088407 Kcna4Q61423 654 aa16.36■□□□□ 0.21
Khdc1a-201ENSMUST00000088407 Abcc9P70170 1546 aa16.29■□□□□ 0.2
Khdc1a-201ENSMUST00000088407 Fam163aQ8CAA5 168 aa16.14■□□□□ 0.17
Khdc1a-201ENSMUST00000088407 NischQ80TM9 1593 aa15.94■□□□□ 0.14
Khdc1a-201ENSMUST00000088407 Abcc8B2RUS7 1588 aa15.75■□□□□ 0.11
Khdc1a-201ENSMUST00000088407 ScribQ80U72 1612 aa15.71■□□□□ 0.11
Khdc1a-201ENSMUST00000088407 Trap1aP19473 224 aa15.67■□□□□ 0.1
Khdc1a-201ENSMUST00000088407 Hoxd11P23813 323 aa15.66■□□□□ 0.1
Khdc1a-201ENSMUST00000088407 Dnajc5bQ9CQ94 199 aa15.64■□□□□ 0.09
Khdc1a-201ENSMUST00000088407 Dnajc5P60904 198 aa15.27■□□□□ 0.03
Khdc1a-201ENSMUST00000088407 Znf219Q6IQX8 726 aa15.23■□□□□ 0.03
Khdc1a-201ENSMUST00000088407 NacadQ5SWP3 1504 aa15.15■□□□□ 0.02
Khdc1a-201ENSMUST00000088407 Rpgrip1Q9EPQ2 1331 aa15.02■□□□□ -0
Khdc1a-201ENSMUST00000088407 ArsiQ32KI9 573 aa14.95□□□□□ -0.02
Khdc1a-201ENSMUST00000088407 Kdm5dQ62240 1548 aa14.95□□□□□ -0.02
Khdc1a-201ENSMUST00000088407 Chrna2Q91X60 512 aa14.89□□□□□ -0.03
Khdc1a-201ENSMUST00000088407 Sycp2Q9CUU3 1500 aa14.89□□□□□ -0.03
Khdc1a-201ENSMUST00000088407 Thoc2B1AZI6 1594 aaKnown RBP14.87□□□□□ -0.03
Khdc1a-201ENSMUST00000088407 Rsph4aQ8BYM7 716 aa14.8□□□□□ -0.04
Khdc1a-201ENSMUST00000088407 BicraF8VPZ9 1578 aa14.79□□□□□ -0.04
Khdc1a-201ENSMUST00000088407 Pds5bQ4VA53 1446 aaKnown RBP14.65□□□□□ -0.06
Khdc1a-201ENSMUST00000088407 Pcgf6Q99NA9 353 aa14.64□□□□□ -0.07
Khdc1a-201ENSMUST00000088407 Myt1Q8CFC2 1127 aa14.62□□□□□ -0.07
Khdc1a-201ENSMUST00000088407 Dmrt2Q8BG36 561 aa14.62□□□□□ -0.07
Khdc1a-201ENSMUST00000088407 DiexfQ8BTT6 772 aaKnown RBP14.6□□□□□ -0.07
Khdc1a-201ENSMUST00000088407 Rimbp2Q80U40 1072 aa14.51□□□□□ -0.09
Khdc1a-201ENSMUST00000088407 Cc2d2aQ8CFW7 1633 aa14.5□□□□□ -0.09
Khdc1a-201ENSMUST00000088407 Dcaf1Q80TR8 1506 aa14.41□□□□□ -0.1
Khdc1a-201ENSMUST00000088407 Akt1s1Q9D1F4 257 aa14.4□□□□□ -0.1
Khdc1a-201ENSMUST00000088407 Baz1bQ9Z277 1479 aa14.39□□□□□ -0.11
Khdc1a-201ENSMUST00000088407 Fam135aQ6NS59 1506 aa14.36□□□□□ -0.11
Khdc1a-201ENSMUST00000088407 Slc34a2Q9DBP0 697 aa14.34□□□□□ -0.11
Khdc1a-201ENSMUST00000088407 CenpbP27790 599 aa14.33□□□□□ -0.12
Khdc1a-201ENSMUST00000088407 Atad2bE9Q166 1460 aaKnown RBP14.3□□□□□ -0.12
Khdc1a-201ENSMUST00000088407 Trim41Q5NCC3 630 aa14.3□□□□□ -0.12
Khdc1a-201ENSMUST00000088407 Ercc6F8VPZ5 1481 aa14.25□□□□□ -0.13
Khdc1a-201ENSMUST00000088407 Las1lA2BE28 776 aaKnown RBP14.23□□□□□ -0.13
Khdc1a-201ENSMUST00000088407 Bcl11aQ9QYE3 773 aa14.14□□□□□ -0.15
Khdc1a-201ENSMUST00000088407 Amer1Q7TS75 1132 aa14.09□□□□□ -0.15
Khdc1a-201ENSMUST00000088407 Hs6st3Q9QYK4 470 aa14.02□□□□□ -0.16
Khdc1a-201ENSMUST00000088407 Phldb1Q6PDH0 1371 aaKnown RBP14.01□□□□□ -0.17
Khdc1a-201ENSMUST00000088407 Ppp4r2Q0VGB7 417 aa14□□□□□ -0.17
Khdc1a-201ENSMUST00000088407 Shroom2A2ALU4 1481 aa13.99□□□□□ -0.17
Khdc1a-201ENSMUST00000088407 Smarca2Q6DIC0 1577 aa13.97□□□□□ -0.17
Khdc1a-201ENSMUST00000088407 Acin1Q9JIX8 1338 aaKnown RBP13.97□□□□□ -0.17
Khdc1a-201ENSMUST00000088407 Mrc2Q64449 1479 aa13.96□□□□□ -0.17
Khdc1a-201ENSMUST00000088407 Rb1cc1Q9ESK9 1588 aa13.95□□□□□ -0.18
Khdc1a-201ENSMUST00000088407 Slc4a1apE9PX68 744 aa13.95□□□□□ -0.18
Khdc1a-201ENSMUST00000088407 Ube2uB1AUC4 352 aa13.92□□□□□ -0.18
Khdc1a-201ENSMUST00000088407 Atf5O70191 283 aa13.92□□□□□ -0.18
Khdc1a-201ENSMUST00000088407 Ppargc1bQ8VHJ7 1014 aa13.92□□□□□ -0.18
Khdc1a-201ENSMUST00000088407 Col17a1Q07563 1470 aa13.92□□□□□ -0.18
Khdc1a-201ENSMUST00000088407 Rhox8Q6VSS7 320 aa13.89□□□□□ -0.19
Khdc1a-201ENSMUST00000088407 Wdr62Q3U3T8 1523 aa13.87□□□□□ -0.19
Khdc1a-201ENSMUST00000088407 Frmpd1A2AKB4 1549 aa13.83□□□□□ -0.2
Khdc1a-201ENSMUST00000088407 Crybg2B7ZCC2 1516 aa13.83□□□□□ -0.2
Khdc1a-201ENSMUST00000088407 Ubl4bQ9CQ84 188 aa13.82□□□□□ -0.2
Khdc1a-201ENSMUST00000088407 1700123L14RikQ3V2K7 440 aa13.8□□□□□ -0.2
Khdc1a-201ENSMUST00000088407 Neurod1Q60867 357 aa13.8□□□□□ -0.2
Khdc1a-201ENSMUST00000088407 Iqgap2Q3UQ44 1575 aa13.8□□□□□ -0.2
Khdc1a-201ENSMUST00000088407 Smarca4Q3TKT4 1613 aaKnown RBP13.77□□□□□ -0.2
Khdc1a-201ENSMUST00000088407 Rsf1E9PWW9 1441 aaKnown RBP13.77□□□□□ -0.21
Khdc1a-201ENSMUST00000088407 PrkcshO08795 521 aa13.75□□□□□ -0.21
Khdc1a-201ENSMUST00000088407 CatipB9EKE5 520 aa13.74□□□□□ -0.21
Khdc1a-201ENSMUST00000088407 Lrriq1Q0P5X1 1673 aa13.68□□□□□ -0.22
Khdc1a-201ENSMUST00000088407 Sox12Q04890 314 aa13.65□□□□□ -0.22
Khdc1a-201ENSMUST00000088407 Ccdc180J3QNE4 1664 aa13.6□□□□□ -0.23
Khdc1a-201ENSMUST00000088407 Zcchc11B2RX14 1644 aaKnown RBP13.6□□□□□ -0.23
Khdc1a-201ENSMUST00000088407 Baz1aO88379 1555 aa13.59□□□□□ -0.23
Khdc1a-201ENSMUST00000088407 Top2bQ64511 1612 aa13.57□□□□□ -0.24
Khdc1a-201ENSMUST00000088407 GapdhsQ64467 440 aa13.56□□□□□ -0.24
Khdc1a-201ENSMUST00000088407 Unc13aQ4KUS2 1712 aa13.56□□□□□ -0.24
Khdc1a-201ENSMUST00000088407 Bach1P97302 739 aa13.56□□□□□ -0.24
Khdc1a-201ENSMUST00000088407 Pabpn1Q8CCS6 302 aaKnown RBP13.54□□□□□ -0.24
Khdc1a-201ENSMUST00000088407 Eif4g3Q80XI3 1579 aaKnown RBP13.54□□□□□ -0.24
Khdc1a-201ENSMUST00000088407 Ttbk1Q6PCN3 1308 aa13.52□□□□□ -0.25
Khdc1a-201ENSMUST00000088407 Pcdh10E9PXQ7 1057 aa13.51□□□□□ -0.25
Khdc1a-201ENSMUST00000088407 Aplp2Q06335 707 aa13.46□□□□□ -0.25
Khdc1a-201ENSMUST00000088407 Arhgef5E9Q7D5 1581 aa13.45□□□□□ -0.26
Khdc1a-201ENSMUST00000088407 Cecr2E9Q2Z1 1453 aa13.42□□□□□ -0.26
Khdc1a-201ENSMUST00000088407 Supt5hO55201 1082 aaKnown RBP13.41□□□□□ -0.26
Khdc1a-201ENSMUST00000088407 Cypt1Q8CH20 168 aa13.41□□□□□ -0.26
Khdc1a-201ENSMUST00000088407 Zcchc6Q5BLK4 1491 aaKnown RBP13.41□□□□□ -0.26
Khdc1a-201ENSMUST00000088407 Csrnp3P59055 597 aa13.37□□□□□ -0.27
Khdc1a-201ENSMUST00000088407 Anks4bQ8K3X6 423 aa13.36□□□□□ -0.27
Khdc1a-201ENSMUST00000088407 Znf704Q9ERQ3 566 aa13.34□□□□□ -0.27
Khdc1a-201ENSMUST00000088407 Slc4a5E9Q3M5 1116 aa13.31□□□□□ -0.28
Khdc1a-201ENSMUST00000088407 Kif21aQ9QXL2 1672 aa13.28□□□□□ -0.28
Khdc1a-201ENSMUST00000088407 Rtl1Q7M732 1744 aa13.26□□□□□ -0.29
Khdc1a-201ENSMUST00000088407 Cngb1E1AZ71 1325 aa13.23□□□□□ -0.29
Khdc1a-201ENSMUST00000088407 Pknox2Q8BG99 474 aa13.21□□□□□ -0.29
Khdc1a-201ENSMUST00000088407 WdpcpQ8C456 722 aa13.2□□□□□ -0.3
Khdc1a-201ENSMUST00000088407 Cux2P70298 1426 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms