RNA–Protein interactions for RNA: ENSMUST00000084838.12

Cd47-201, Transcript of Leukocyte surface antigen CD47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cd47, Length 5,277 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47-201ENSMUST00000084838 Rhox8Q6VSS7 320 aa32.84■■■□□ 2.85
Cd47-201ENSMUST00000084838 NischQ80TM9 1593 aa29.24■■■□□ 2.27
Cd47-201ENSMUST00000084838 Ccdc136Q3TVA9 1136 aa29.2■■■□□ 2.27
Cd47-201ENSMUST00000084838 Esf1Q3V1V3 845 aaKnown RBP29.19■■■□□ 2.26
Cd47-201ENSMUST00000084838 Cngb1E1AZ71 1325 aa28.95■■■□□ 2.23
Cd47-201ENSMUST00000084838 Trim41Q5NCC3 630 aa28.74■■■□□ 2.19
Cd47-201ENSMUST00000084838 Rpgrip1Q9EPQ2 1331 aa28.7■■■□□ 2.18
Cd47-201ENSMUST00000084838 Ehmt2Q9Z148 1263 aaKnown RBP28.61■■■□□ 2.17
Cd47-201ENSMUST00000084838 Zeb1Q64318 1117 aa28.52■■■□□ 2.16
Cd47-201ENSMUST00000084838 Gab3Q8BSM5 595 aa28.38■■■□□ 2.13
Cd47-201ENSMUST00000084838 Npm2Q80W85 207 aa28.37■■■□□ 2.13
Cd47-201ENSMUST00000084838 Ube2uB1AUC4 352 aa28.2■■■□□ 2.11
Cd47-201ENSMUST00000084838 Myt1lP97500 1187 aa28.03■■■□□ 2.08
Cd47-201ENSMUST00000084838 Las1lA2BE28 776 aaKnown RBP27.97■■■□□ 2.07
Cd47-201ENSMUST00000084838 Wdr66E9Q743 1299 aa27.82■■■□□ 2.04
Cd47-201ENSMUST00000084838 Abcc9P70170 1546 aa27.61■■■□□ 2.01
Cd47-201ENSMUST00000084838 Il27Q8K3I6 234 aa27.45■■□□□ 1.98
Cd47-201ENSMUST00000084838 Zcchc6Q5BLK4 1491 aaKnown RBP27.29■■□□□ 1.96
Cd47-201ENSMUST00000084838 UbtfP25976 765 aaKnown RBP27.19■■□□□ 1.94
Cd47-201ENSMUST00000084838 Gm35339A0A140LHH9 1649 aa27.18■■□□□ 1.94
Cd47-201ENSMUST00000084838 HrcG5E8J6 738 aa27.1■■□□□ 1.93
Cd47-201ENSMUST00000084838 Ccdc180J3QNE4 1664 aa26.98■■□□□ 1.91
Cd47-201ENSMUST00000084838 NefmP08553 848 aa26.95■■□□□ 1.91
Cd47-201ENSMUST00000084838 Acin1Q9JIX8 1338 aaKnown RBP26.76■■□□□ 1.87
Cd47-201ENSMUST00000084838 Pelp1Q9DBD5 1123 aaKnown RBP26.76■■□□□ 1.87
Cd47-201ENSMUST00000084838 Rtl1Q7M732 1744 aa26.71■■□□□ 1.87
Cd47-201ENSMUST00000084838 Abcc8B2RUS7 1588 aa26.7■■□□□ 1.87
Cd47-201ENSMUST00000084838 Ap3b1Q9Z1T1 1105 aa26.65■■□□□ 1.86
Cd47-201ENSMUST00000084838 Npm1Q61937 292 aaKnown RBP26.56■■□□□ 1.84
Cd47-201ENSMUST00000084838 Fam50aQ9WV03 339 aaKnown RBP26.55■■□□□ 1.84
Cd47-201ENSMUST00000084838 Stra8P70278 393 aa26.51■■□□□ 1.83
Cd47-201ENSMUST00000084838 Slc24a1Q91WD8 1130 aa26.36■■□□□ 1.81
Cd47-201ENSMUST00000084838 Neurod1Q60867 357 aa26.23■■□□□ 1.79
Cd47-201ENSMUST00000084838 Os9Q8K2C7 672 aa26.22■■□□□ 1.79
Cd47-201ENSMUST00000084838 Anp32bQ9EST5 272 aaKnown RBP26.18■■□□□ 1.78
Cd47-201ENSMUST00000084838 NclP09405 707 aaKnown RBP26.15■■□□□ 1.78
Cd47-201ENSMUST00000084838 Brd4Q9ESU6 1400 aaKnown RBP26.01■■□□□ 1.76
Cd47-201ENSMUST00000084838 NrdcQ8BHG1 1161 aa26.01■■□□□ 1.75
Cd47-201ENSMUST00000084838 Lmod2Q3UHZ5 550 aa25.99■■□□□ 1.75
Cd47-201ENSMUST00000084838 CenpbP27790 599 aa25.9■■□□□ 1.74
Cd47-201ENSMUST00000084838 Cdk11bP24788 784 aaKnown RBP25.86■■□□□ 1.73
Cd47-201ENSMUST00000084838 Ifnlr1Q8CGK5 535 aa25.86■■□□□ 1.73
Cd47-201ENSMUST00000084838 Zbtb7cQ8VCZ7 619 aa25.84■■□□□ 1.73
Cd47-201ENSMUST00000084838 Ubl4bQ9CQ84 188 aa25.83■■□□□ 1.72
Cd47-201ENSMUST00000084838 TonslQ6NZL6 1363 aa25.83■■□□□ 1.72
Cd47-201ENSMUST00000084838 Hnrnpul2Q00PI9 745 aaKnown RBP25.79■■□□□ 1.72
Cd47-201ENSMUST00000084838 Plekhg3Q4VAC9 1341 aa25.79■■□□□ 1.72
Cd47-201ENSMUST00000084838 Gm13697A2AK42 830 aa25.76■■□□□ 1.71
Cd47-201ENSMUST00000084838 Rb1cc1Q9ESK9 1588 aa25.71■■□□□ 1.71
Cd47-201ENSMUST00000084838 Mier1Q5UAK0 511 aa25.68■■□□□ 1.7
Cd47-201ENSMUST00000084838 Fkbp15Q6P9Q6 1216 aaKnown RBP25.61■■□□□ 1.69
Cd47-201ENSMUST00000084838 Nop58Q6DFW4 536 aaKnown RBP25.6■■□□□ 1.69
Cd47-201ENSMUST00000084838 NeflP08551 543 aa25.59■■□□□ 1.69
Cd47-201ENSMUST00000084838 NacadQ5SWP3 1504 aa25.57■■□□□ 1.68
Cd47-201ENSMUST00000084838 Ppargc1bQ8VHJ7 1014 aa25.57■■□□□ 1.68
Cd47-201ENSMUST00000084838 Tnnt3Q9QZ47 272 aa25.53■■□□□ 1.68
Cd47-201ENSMUST00000084838 Eif5bQ05D44 1216 aaKnown RBP25.49■■□□□ 1.67
Cd47-201ENSMUST00000084838 Clip1Q922J3 1391 aa25.48■■□□□ 1.67
Cd47-201ENSMUST00000084838 Chic1Q8CBW7 227 aa25.48■■□□□ 1.67
Cd47-201ENSMUST00000084838 Pcgf6Q99NA9 353 aa25.47■■□□□ 1.67
Cd47-201ENSMUST00000084838 Erich6D3Z6S9 713 aa25.45■■□□□ 1.66
Cd47-201ENSMUST00000084838 Hdac5Q9Z2V6 1113 aa25.41■■□□□ 1.66
Cd47-201ENSMUST00000084838 Dcaf1Q80TR8 1506 aa25.4■■□□□ 1.66
Cd47-201ENSMUST00000084838 Atp1b4Q99ME6 356 aa25.39■■□□□ 1.65
Cd47-201ENSMUST00000084838 Cep164Q5DU05 1446 aa25.39■■□□□ 1.65
Cd47-201ENSMUST00000084838 Ttbk1Q6PCN3 1308 aa25.36■■□□□ 1.65
Cd47-201ENSMUST00000084838 Gm13695A2AK44 830 aa25.29■■□□□ 1.64
Cd47-201ENSMUST00000084838 Zbtb4Q5F293 982 aa25.23■■□□□ 1.63
Cd47-201ENSMUST00000084838 Amer1Q7TS75 1132 aa25.22■■□□□ 1.63
Cd47-201ENSMUST00000084838 Plppr3Q7TPB0 716 aa25.21■■□□□ 1.63
Cd47-201ENSMUST00000084838 Supt5hO55201 1082 aaKnown RBP25.2■■□□□ 1.62
Cd47-201ENSMUST00000084838 Ccer2J3QPU5 274 aa25.18■■□□□ 1.62
Cd47-201ENSMUST00000084838 Eid3Q3V124 375 aa25.14■■□□□ 1.62
Cd47-201ENSMUST00000084838 Rsf1E9PWW9 1441 aaKnown RBP25.13■■□□□ 1.61
Cd47-201ENSMUST00000084838 Kif15Q6P9L6 1387 aa25.11■■□□□ 1.61
Cd47-201ENSMUST00000084838 Baz1aO88379 1555 aa25.11■■□□□ 1.61
Cd47-201ENSMUST00000084838 Ercc6F8VPZ5 1481 aa25.1■■□□□ 1.61
Cd47-201ENSMUST00000084838 ClspnQ80YR7 1315 aa25.08■■□□□ 1.6
Cd47-201ENSMUST00000084838 Nlrp6Q91WS2 869 aa25.07■■□□□ 1.6
Cd47-201ENSMUST00000084838 BlmO88700 1416 aa25■■□□□ 1.59
Cd47-201ENSMUST00000084838 Prdm10Q3UTQ7 1184 aa24.99■■□□□ 1.59
Cd47-201ENSMUST00000084838 Clstn2Q9ER65 966 aa24.98■■□□□ 1.59
Cd47-201ENSMUST00000084838 Chic2Q9D9G3 165 aa24.98■■□□□ 1.59
Cd47-201ENSMUST00000084838 Golga3P55937 1487 aa24.92■■□□□ 1.58
Cd47-201ENSMUST00000084838 Setd5Q5XJV7 1441 aa24.92■■□□□ 1.58
Cd47-201ENSMUST00000084838 Ccdc18Q640L5 1455 aa24.9■■□□□ 1.58
Cd47-201ENSMUST00000084838 Safb2Q80YR5 991 aaKnown RBP24.89■■□□□ 1.57
Cd47-201ENSMUST00000084838 Kdm5dQ62240 1548 aa24.83■■□□□ 1.57
Cd47-201ENSMUST00000084838 4933416C03RikQ3V063 378 aa24.83■■□□□ 1.56
Cd47-201ENSMUST00000084838 Mapk8ip2Q9ERE9 830 aa24.82■■□□□ 1.56
Cd47-201ENSMUST00000084838 Polr3glQ8R0C0 218 aa24.72■■□□□ 1.55
Cd47-201ENSMUST00000084838 Arhgap27A2AB59 869 aa24.71■■□□□ 1.55
Cd47-201ENSMUST00000084838 Pds5bQ4VA53 1446 aaKnown RBP24.66■■□□□ 1.54
Cd47-201ENSMUST00000084838 Eea1Q8BL66 1411 aa24.58■■□□□ 1.52
Cd47-201ENSMUST00000084838 P3h3Q8CG70 732 aa24.56■■□□□ 1.52
Cd47-201ENSMUST00000084838 DiexfQ8BTT6 772 aaKnown RBP24.51■■□□□ 1.51
Cd47-201ENSMUST00000084838 Sall2Q9QX96 1004 aa24.45■■□□□ 1.5
Cd47-201ENSMUST00000084838 Rgl3Q3UYI5 709 aa24.45■■□□□ 1.5
Cd47-201ENSMUST00000084838 Rtl5Q5DTT4 599 aa24.43■■□□□ 1.5
Cd47-201ENSMUST00000084838 4930567H17RikQ3V0K5 233 aa24.41■■□□□ 1.5
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms