RNA–Protein interactions for RNA: ENSMUST00000076687.11

Cdc42bpa-201, Transcript of Serine/threonine-protein kinase MRCK alpha, mousemouse

TSL 5 BASIC

Gene Cdc42bpa, Length 4,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42bpa-201ENSMUST00000076687 Rpgrip1Q9EPQ2 1331 aa10.54□□□□□ -0.72
Cdc42bpa-201ENSMUST00000076687 Rhox8Q6VSS7 320 aa10.36□□□□□ -0.75
Cdc42bpa-201ENSMUST00000076687 Gm35339A0A140LHH9 1649 aa10.31□□□□□ -0.76
Cdc42bpa-201ENSMUST00000076687 Las1lA2BE28 776 aaKnown RBP10.29□□□□□ -0.76
Cdc42bpa-201ENSMUST00000076687 NischQ80TM9 1593 aa10.2□□□□□ -0.78
Cdc42bpa-201ENSMUST00000076687 Cngb1E1AZ71 1325 aa10.16□□□□□ -0.78
Cdc42bpa-201ENSMUST00000076687 Myt1Q8CFC2 1127 aa10.05□□□□□ -0.8
Cdc42bpa-201ENSMUST00000076687 Chic1Q8CBW7 227 aa10.01□□□□□ -0.81
Cdc42bpa-201ENSMUST00000076687 Pelp1Q9DBD5 1123 aaKnown RBP10□□□□□ -0.81
Cdc42bpa-201ENSMUST00000076687 Abcc9P70170 1546 aa9.98□□□□□ -0.81
Cdc42bpa-201ENSMUST00000076687 Amer1Q7TS75 1132 aa9.94□□□□□ -0.82
Cdc42bpa-201ENSMUST00000076687 Ube2uB1AUC4 352 aa9.92□□□□□ -0.82
Cdc42bpa-201ENSMUST00000076687 CenpbP27790 599 aa9.86□□□□□ -0.83
Cdc42bpa-201ENSMUST00000076687 DiexfQ8BTT6 772 aaKnown RBP9.85□□□□□ -0.83
Cdc42bpa-201ENSMUST00000076687 Plppr3Q7TPB0 716 aa9.8□□□□□ -0.84
Cdc42bpa-201ENSMUST00000076687 Abcc8B2RUS7 1588 aa9.76□□□□□ -0.85
Cdc42bpa-201ENSMUST00000076687 Ehmt2Q9Z148 1263 aaKnown RBP9.67□□□□□ -0.86
Cdc42bpa-201ENSMUST00000076687 Wdr66E9Q743 1299 aa9.57□□□□□ -0.88
Cdc42bpa-201ENSMUST00000076687 Pcgf6Q99NA9 353 aa9.56□□□□□ -0.88
Cdc42bpa-201ENSMUST00000076687 Acin1Q9JIX8 1338 aaKnown RBP9.55□□□□□ -0.88
Cdc42bpa-201ENSMUST00000076687 4930567H17RikQ3V0K5 233 aa9.52□□□□□ -0.89
Cdc42bpa-201ENSMUST00000076687 Gab3Q8BSM5 595 aa9.29□□□□□ -0.92
Cdc42bpa-201ENSMUST00000076687 Zeb1Q64318 1117 aa9.28□□□□□ -0.92
Cdc42bpa-201ENSMUST00000076687 Rtl1Q7M732 1744 aa9.26□□□□□ -0.93
Cdc42bpa-201ENSMUST00000076687 Stra8P70278 393 aa9.24□□□□□ -0.93
Cdc42bpa-201ENSMUST00000076687 Bcl11aQ9QYE3 773 aa9.22□□□□□ -0.93
Cdc42bpa-201ENSMUST00000076687 ScribQ80U72 1612 aa9.21□□□□□ -0.94
Cdc42bpa-201ENSMUST00000076687 Rtl5Q5DTT4 599 aa9.19□□□□□ -0.94
Cdc42bpa-201ENSMUST00000076687 Kcna4Q61423 654 aa9.19□□□□□ -0.94
Cdc42bpa-201ENSMUST00000076687 Ppargc1bQ8VHJ7 1014 aa9.17□□□□□ -0.94
Cdc42bpa-201ENSMUST00000076687 Esf1Q3V1V3 845 aaKnown RBP9.17□□□□□ -0.94
Cdc42bpa-201ENSMUST00000076687 Dcaf1Q80TR8 1506 aa9.15□□□□□ -0.94
Cdc42bpa-201ENSMUST00000076687 Neurod1Q60867 357 aa9.14□□□□□ -0.95
Cdc42bpa-201ENSMUST00000076687 Supt5hO55201 1082 aaKnown RBP9.12□□□□□ -0.95
Cdc42bpa-201ENSMUST00000076687 Ttbk1Q6PCN3 1308 aa9.11□□□□□ -0.95
Cdc42bpa-201ENSMUST00000076687 Cdk11bP24788 784 aaKnown RBP9.09□□□□□ -0.95
Cdc42bpa-201ENSMUST00000076687 Aplp2Q06335 707 aa9.07□□□□□ -0.96
Cdc42bpa-201ENSMUST00000076687 Ccdc180J3QNE4 1664 aa9.06□□□□□ -0.96
Cdc42bpa-201ENSMUST00000076687 4933416C03RikQ3V063 378 aa9.05□□□□□ -0.96
Cdc42bpa-201ENSMUST00000076687 Npm2Q80W85 207 aa9.05□□□□□ -0.96
Cdc42bpa-201ENSMUST00000076687 NefmP08553 848 aa9.02□□□□□ -0.97
Cdc42bpa-201ENSMUST00000076687 Anks4bQ8K3X6 423 aa9□□□□□ -0.97
Cdc42bpa-201ENSMUST00000076687 1700123L14RikQ3V2K7 440 aa9□□□□□ -0.97
Cdc42bpa-201ENSMUST00000076687 Tnnt3Q9QZ47 272 aa9□□□□□ -0.97
Cdc42bpa-201ENSMUST00000076687 Csrnp3P59055 597 aa8.99□□□□□ -0.97
Cdc42bpa-201ENSMUST00000076687 Slc24a1Q91WD8 1130 aa8.95□□□□□ -0.98
Cdc42bpa-201ENSMUST00000076687 Rb1cc1Q9ESK9 1588 aa8.95□□□□□ -0.98
Cdc42bpa-201ENSMUST00000076687 Kdm5dQ62240 1548 aa8.95□□□□□ -0.98
Cdc42bpa-201ENSMUST00000076687 Myt1lP97500 1187 aa8.94□□□□□ -0.98
Cdc42bpa-201ENSMUST00000076687 Nop58Q6DFW4 536 aaKnown RBP8.94□□□□□ -0.98
Cdc42bpa-201ENSMUST00000076687 Zcchc6Q5BLK4 1491 aaKnown RBP8.89□□□□□ -0.99
Cdc42bpa-201ENSMUST00000076687 Slc4a1apE9PX68 744 aa8.88□□□□□ -0.99
Cdc42bpa-201ENSMUST00000076687 Ccdc136Q3TVA9 1136 aa8.88□□□□□ -0.99
Cdc42bpa-201ENSMUST00000076687 NacadQ5SWP3 1504 aa8.87□□□□□ -0.99
Cdc42bpa-201ENSMUST00000076687 Anp32bQ9EST5 272 aaKnown RBP8.86□□□□□ -0.99
Cdc42bpa-201ENSMUST00000076687 Baz1aO88379 1555 aa8.86□□□□□ -0.99
Cdc42bpa-201ENSMUST00000076687 NeflP08551 543 aa8.85□□□□□ -0.99
Cdc42bpa-201ENSMUST00000076687 Anp32aO35381 247 aa8.85□□□□□ -0.99
Cdc42bpa-201ENSMUST00000076687 Mapk8ip2Q9ERE9 830 aa8.85□□□□□ -0.99
Cdc42bpa-201ENSMUST00000076687 Ythdc1E9Q5K9 736 aaKnown RBP8.83□□□□□ -1
Cdc42bpa-201ENSMUST00000076687 Trim41Q5NCC3 630 aa8.83□□□□□ -1
Cdc42bpa-201ENSMUST00000076687 Ccdc9Q8VC31 543 aaKnown RBP8.82□□□□□ -1
Cdc42bpa-201ENSMUST00000076687 NrdcQ8BHG1 1161 aa8.79□□□□□ -1
Cdc42bpa-201ENSMUST00000076687 PrkcshO08795 521 aa8.78□□□□□ -1
Cdc42bpa-201ENSMUST00000076687 Gm38655A0A286YDK6 273 aa8.77□□□□□ -1
Cdc42bpa-201ENSMUST00000076687 Os9Q8K2C7 672 aa8.76□□□□□ -1.01
Cdc42bpa-201ENSMUST00000076687 Pknox2Q8BG99 474 aa8.76□□□□□ -1.01
Cdc42bpa-201ENSMUST00000076687 Crybg2B7ZCC2 1516 aa8.76□□□□□ -1.01
Cdc42bpa-201ENSMUST00000076687 HrcG5E8J6 738 aa8.73□□□□□ -1.01
Cdc42bpa-201ENSMUST00000076687 Fam71e1A1L3C1 212 aa8.71□□□□□ -1.02
Cdc42bpa-201ENSMUST00000076687 Sycp2Q9CUU3 1500 aa8.69□□□□□ -1.02
Cdc42bpa-201ENSMUST00000076687 Smarca2Q6DIC0 1577 aa8.68□□□□□ -1.02
Cdc42bpa-201ENSMUST00000076687 Phf23Q8BSN5 401 aa8.66□□□□□ -1.02
Cdc42bpa-201ENSMUST00000076687 CatipB9EKE5 520 aa8.65□□□□□ -1.02
Cdc42bpa-201ENSMUST00000076687 UbtfP25976 765 aaKnown RBP8.64□□□□□ -1.03
Cdc42bpa-201ENSMUST00000076687 Trap1aP19473 224 aa8.63□□□□□ -1.03
Cdc42bpa-201ENSMUST00000076687 Prm3Q62100 101 aa8.63□□□□□ -1.03
Cdc42bpa-201ENSMUST00000076687 DaxxO35613 739 aa8.63□□□□□ -1.03
Cdc42bpa-201ENSMUST00000076687 Irx3P81067 507 aa8.61□□□□□ -1.03
Cdc42bpa-201ENSMUST00000076687 Hsp90aa1P07901 733 aaKnown RBP8.6□□□□□ -1.03
Cdc42bpa-201ENSMUST00000076687 Sall2Q9QX96 1004 aa8.6□□□□□ -1.03
Cdc42bpa-201ENSMUST00000076687 ClspnQ80YR7 1315 aa8.58□□□□□ -1.04
Cdc42bpa-201ENSMUST00000076687 Gm13697A2AK42 830 aa8.57□□□□□ -1.04
Cdc42bpa-201ENSMUST00000076687 BccipQ9CWI3 316 aa8.57□□□□□ -1.04
Cdc42bpa-201ENSMUST00000076687 Eif5bQ05D44 1216 aaKnown RBP8.56□□□□□ -1.04
Cdc42bpa-201ENSMUST00000076687 BicraF8VPZ9 1578 aa8.56□□□□□ -1.04
Cdc42bpa-201ENSMUST00000076687 Hdac5Q9Z2V6 1113 aa8.55□□□□□ -1.04
Cdc42bpa-201ENSMUST00000076687 Il27Q8K3I6 234 aa8.54□□□□□ -1.04
Cdc42bpa-201ENSMUST00000076687 NclP09405 707 aaKnown RBP8.53□□□□□ -1.04
Cdc42bpa-201ENSMUST00000076687 Ccdc27Q3V036 639 aa8.52□□□□□ -1.05
Cdc42bpa-201ENSMUST00000076687 Gtf3c3Q3TMP1 882 aa8.51□□□□□ -1.05
Cdc42bpa-201ENSMUST00000076687 AcrbpQ3V140 540 aa8.51□□□□□ -1.05
Cdc42bpa-201ENSMUST00000076687 Arid3aQ62431 601 aa8.48□□□□□ -1.05
Cdc42bpa-201ENSMUST00000076687 Znf316Q6PGE4 1016 aa8.48□□□□□ -1.05
Cdc42bpa-201ENSMUST00000076687 Prdm10Q3UTQ7 1184 aa8.47□□□□□ -1.05
Cdc42bpa-201ENSMUST00000076687 Fam50aQ9WV03 339 aaKnown RBP8.47□□□□□ -1.05
Cdc42bpa-201ENSMUST00000076687 Senp3Q9EP97 568 aaKnown RBP8.46□□□□□ -1.06
Cdc42bpa-201ENSMUST00000076687 Upf2A2AT37 1269 aaKnown RBP8.44□□□□□ -1.06
Cdc42bpa-201ENSMUST00000076687 Gtf3c5Q8R2T8 520 aa8.44□□□□□ -1.06
Cdc42bpa-201ENSMUST00000076687 TonslQ6NZL6 1363 aa8.4□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 216.1 ms