RNA–Protein interactions for RNA: ENSMUST00000074002.11

Ube3b-201, Transcript of Ubiquitin-protein ligase E3B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ube3b, Length 5,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3b-201ENSMUST00000074002 Rhox8Q6VSS7 320 aa24.54■■□□□ 1.52
Ube3b-201ENSMUST00000074002 NischQ80TM9 1593 aa24.43■■□□□ 1.5
Ube3b-201ENSMUST00000074002 Abcc9P70170 1546 aa23.3■■□□□ 1.32
Ube3b-201ENSMUST00000074002 Gm35339A0A140LHH9 1649 aa22.92■■□□□ 1.26
Ube3b-201ENSMUST00000074002 Abcc8B2RUS7 1588 aa22.88■■□□□ 1.25
Ube3b-201ENSMUST00000074002 Rpgrip1Q9EPQ2 1331 aa22.75■■□□□ 1.23
Ube3b-201ENSMUST00000074002 Ccdc136Q3TVA9 1136 aa22.34■■□□□ 1.17
Ube3b-201ENSMUST00000074002 Ehmt2Q9Z148 1263 aaKnown RBP22.11■■□□□ 1.13
Ube3b-201ENSMUST00000074002 Rtl1Q7M732 1744 aa21.97■■□□□ 1.11
Ube3b-201ENSMUST00000074002 Trim41Q5NCC3 630 aa21.9■■□□□ 1.1
Ube3b-201ENSMUST00000074002 Ccdc180J3QNE4 1664 aa21.83■■□□□ 1.08
Ube3b-201ENSMUST00000074002 Las1lA2BE28 776 aaKnown RBP21.76■■□□□ 1.07
Ube3b-201ENSMUST00000074002 Cngb1E1AZ71 1325 aa21.72■■□□□ 1.07
Ube3b-201ENSMUST00000074002 Esf1Q3V1V3 845 aaKnown RBP21.71■■□□□ 1.07
Ube3b-201ENSMUST00000074002 Zcchc6Q5BLK4 1491 aaKnown RBP21.63■■□□□ 1.05
Ube3b-201ENSMUST00000074002 Acin1Q9JIX8 1338 aaKnown RBP21.46■■□□□ 1.03
Ube3b-201ENSMUST00000074002 Rb1cc1Q9ESK9 1588 aa21.43■■□□□ 1.02
Ube3b-201ENSMUST00000074002 HrcG5E8J6 738 aa21.35■■□□□ 1.01
Ube3b-201ENSMUST00000074002 Pcgf6Q99NA9 353 aa21.34■■□□□ 1.01
Ube3b-201ENSMUST00000074002 Gab3Q8BSM5 595 aa21.32■■□□□ 1
Ube3b-201ENSMUST00000074002 NacadQ5SWP3 1504 aa21.28■■□□□ 1
Ube3b-201ENSMUST00000074002 Dcaf1Q80TR8 1506 aa21.2■□□□□ 0.99
Ube3b-201ENSMUST00000074002 Zeb1Q64318 1117 aa21.13■□□□□ 0.97
Ube3b-201ENSMUST00000074002 Kdm5dQ62240 1548 aa21.11■□□□□ 0.97
Ube3b-201ENSMUST00000074002 Baz1aO88379 1555 aa21.06■□□□□ 0.96
Ube3b-201ENSMUST00000074002 ScribQ80U72 1612 aa20.95■□□□□ 0.94
Ube3b-201ENSMUST00000074002 Npm2Q80W85 207 aa20.95■□□□□ 0.94
Ube3b-201ENSMUST00000074002 Wdr66E9Q743 1299 aa20.84■□□□□ 0.93
Ube3b-201ENSMUST00000074002 CenpbP27790 599 aa20.84■□□□□ 0.93
Ube3b-201ENSMUST00000074002 Myt1lP97500 1187 aa20.82■□□□□ 0.92
Ube3b-201ENSMUST00000074002 Brd4Q9ESU6 1400 aaKnown RBP20.8■□□□□ 0.92
Ube3b-201ENSMUST00000074002 Supt5hO55201 1082 aaKnown RBP20.75■□□□□ 0.91
Ube3b-201ENSMUST00000074002 Myt1Q8CFC2 1127 aa20.66■□□□□ 0.9
Ube3b-201ENSMUST00000074002 Il27Q8K3I6 234 aa20.6■□□□□ 0.89
Ube3b-201ENSMUST00000074002 Sycp2Q9CUU3 1500 aa20.57■□□□□ 0.88
Ube3b-201ENSMUST00000074002 DiexfQ8BTT6 772 aaKnown RBP20.52■□□□□ 0.87
Ube3b-201ENSMUST00000074002 Neurod1Q60867 357 aa20.51■□□□□ 0.87
Ube3b-201ENSMUST00000074002 Crybg2B7ZCC2 1516 aa20.48■□□□□ 0.87
Ube3b-201ENSMUST00000074002 Cep164Q5DU05 1446 aa20.46■□□□□ 0.87
Ube3b-201ENSMUST00000074002 Chic1Q8CBW7 227 aa20.43■□□□□ 0.86
Ube3b-201ENSMUST00000074002 UbtfP25976 765 aaKnown RBP20.39■□□□□ 0.85
Ube3b-201ENSMUST00000074002 Pelp1Q9DBD5 1123 aaKnown RBP20.32■□□□□ 0.84
Ube3b-201ENSMUST00000074002 Smarca2Q6DIC0 1577 aa20.27■□□□□ 0.83
Ube3b-201ENSMUST00000074002 Golga3P55937 1487 aa20.26■□□□□ 0.83
Ube3b-201ENSMUST00000074002 NefmP08553 848 aa20.23■□□□□ 0.83
Ube3b-201ENSMUST00000074002 Cdk11bP24788 784 aaKnown RBP20.22■□□□□ 0.83
Ube3b-201ENSMUST00000074002 Amer1Q7TS75 1132 aa20.17■□□□□ 0.82
Ube3b-201ENSMUST00000074002 Csrnp3P59055 597 aa20.13■□□□□ 0.81
Ube3b-201ENSMUST00000074002 Ube2uB1AUC4 352 aa20.12■□□□□ 0.81
Ube3b-201ENSMUST00000074002 Npm1Q61937 292 aaKnown RBP20.11■□□□□ 0.81
Ube3b-201ENSMUST00000074002 Cecr2E9Q2Z1 1453 aa20.1■□□□□ 0.81
Ube3b-201ENSMUST00000074002 Ap3b1Q9Z1T1 1105 aa20.06■□□□□ 0.8
Ube3b-201ENSMUST00000074002 Nop58Q6DFW4 536 aaKnown RBP20.04■□□□□ 0.8
Ube3b-201ENSMUST00000074002 Rsf1E9PWW9 1441 aaKnown RBP20.04■□□□□ 0.8
Ube3b-201ENSMUST00000074002 Gm38655A0A286YDK6 273 aa20.01■□□□□ 0.79
Ube3b-201ENSMUST00000074002 Ppargc1bQ8VHJ7 1014 aa20■□□□□ 0.79
Ube3b-201ENSMUST00000074002 Ttbk1Q6PCN3 1308 aa19.98■□□□□ 0.79
Ube3b-201ENSMUST00000074002 1700123L14RikQ3V2K7 440 aa19.97■□□□□ 0.79
Ube3b-201ENSMUST00000074002 CftrP26361 1476 aa19.96■□□□□ 0.79
Ube3b-201ENSMUST00000074002 Pds5bQ4VA53 1446 aaKnown RBP19.95■□□□□ 0.78
Ube3b-201ENSMUST00000074002 Ubl4bQ9CQ84 188 aa19.93■□□□□ 0.78
Ube3b-201ENSMUST00000074002 Ercc6F8VPZ5 1481 aa19.9■□□□□ 0.78
Ube3b-201ENSMUST00000074002 Mier1Q5UAK0 511 aa19.9■□□□□ 0.78
Ube3b-201ENSMUST00000074002 Synj1Q8CHC4 1574 aa19.89■□□□□ 0.77
Ube3b-201ENSMUST00000074002 Anks4bQ8K3X6 423 aa19.88■□□□□ 0.77
Ube3b-201ENSMUST00000074002 Ccdc88bQ4QRL3 1481 aa19.87■□□□□ 0.77
Ube3b-201ENSMUST00000074002 Plekhg3Q4VAC9 1341 aa19.83■□□□□ 0.76
Ube3b-201ENSMUST00000074002 Kif15Q6P9L6 1387 aa19.83■□□□□ 0.76
Ube3b-201ENSMUST00000074002 Smarca4Q3TKT4 1613 aaKnown RBP19.8■□□□□ 0.76
Ube3b-201ENSMUST00000074002 Clip1Q922J3 1391 aa19.78■□□□□ 0.76
Ube3b-201ENSMUST00000074002 Sall2Q9QX96 1004 aa19.77■□□□□ 0.76
Ube3b-201ENSMUST00000074002 Aplp2Q06335 707 aa19.75■□□□□ 0.75
Ube3b-201ENSMUST00000074002 Atad2bE9Q166 1460 aaKnown RBP19.75■□□□□ 0.75
Ube3b-201ENSMUST00000074002 Fam50aQ9WV03 339 aaKnown RBP19.74■□□□□ 0.75
Ube3b-201ENSMUST00000074002 Fmn1Q05860 1466 aa19.71■□□□□ 0.75
Ube3b-201ENSMUST00000074002 Cttnbp2B9EJA2 1648 aa19.69■□□□□ 0.74
Ube3b-201ENSMUST00000074002 BicraF8VPZ9 1578 aa19.66■□□□□ 0.74
Ube3b-201ENSMUST00000074002 Lmod2Q3UHZ5 550 aa19.65■□□□□ 0.74
Ube3b-201ENSMUST00000074002 Bcl11aQ9QYE3 773 aa19.61■□□□□ 0.73
Ube3b-201ENSMUST00000074002 Ccdc18Q640L5 1455 aa19.61■□□□□ 0.73
Ube3b-201ENSMUST00000074002 Tnnt3Q9QZ47 272 aa19.6■□□□□ 0.73
Ube3b-201ENSMUST00000074002 Iqgap2Q3UQ44 1575 aa19.56■□□□□ 0.72
Ube3b-201ENSMUST00000074002 TonslQ6NZL6 1363 aa19.53■□□□□ 0.72
Ube3b-201ENSMUST00000074002 Slc24a1Q91WD8 1130 aa19.53■□□□□ 0.72
Ube3b-201ENSMUST00000074002 Setd5Q5XJV7 1441 aa19.47■□□□□ 0.71
Ube3b-201ENSMUST00000074002 Stra8P70278 393 aa19.47■□□□□ 0.71
Ube3b-201ENSMUST00000074002 Cep162Q6ZQ06 1403 aa19.45■□□□□ 0.7
Ube3b-201ENSMUST00000074002 Rtl5Q5DTT4 599 aa19.39■□□□□ 0.69
Ube3b-201ENSMUST00000074002 ClspnQ80YR7 1315 aa19.38■□□□□ 0.69
Ube3b-201ENSMUST00000074002 Eea1Q8BL66 1411 aa19.38■□□□□ 0.69
Ube3b-201ENSMUST00000074002 Phldb1Q6PDH0 1371 aaKnown RBP19.37■□□□□ 0.69
Ube3b-201ENSMUST00000074002 4933416C03RikQ3V063 378 aa19.37■□□□□ 0.69
Ube3b-201ENSMUST00000074002 Mapk8ip2Q9ERE9 830 aa19.36■□□□□ 0.69
Ube3b-201ENSMUST00000074002 BlmO88700 1416 aa19.35■□□□□ 0.69
Ube3b-201ENSMUST00000074002 NclP09405 707 aaKnown RBP19.35■□□□□ 0.69
Ube3b-201ENSMUST00000074002 Fam71e1A1L3C1 212 aa19.33■□□□□ 0.68
Ube3b-201ENSMUST00000074002 Anp32aO35381 247 aa19.33■□□□□ 0.68
Ube3b-201ENSMUST00000074002 Cux2P70298 1426 aa19.3■□□□□ 0.68
Ube3b-201ENSMUST00000074002 Rapgef2Q8CHG7 1496 aa19.27■□□□□ 0.68
Ube3b-201ENSMUST00000074002 Cc2d2aQ8CFW7 1633 aa19.26■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 1188.9 ms