RNA–Protein interactions for RNA: ENSMUST00000071213.3

Polr2a-202, Transcript of DNA-directed RNA polymerase II subunit RPB1, mousemouse

TSL 5 BASIC

Gene Polr2a, Length 5,799 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2a-202ENSMUST00000071213 Rhox8Q6VSS7 320 aa23.98■■□□□ 1.43
Polr2a-202ENSMUST00000071213 NischQ80TM9 1593 aa22.59■■□□□ 1.21
Polr2a-202ENSMUST00000071213 Rpgrip1Q9EPQ2 1331 aa21.68■■□□□ 1.06
Polr2a-202ENSMUST00000071213 Ccdc136Q3TVA9 1136 aa21.57■■□□□ 1.04
Polr2a-202ENSMUST00000071213 Abcc9P70170 1546 aa21.31■■□□□ 1
Polr2a-202ENSMUST00000071213 Ehmt2Q9Z148 1263 aaKnown RBP21.27■■□□□ 1
Polr2a-202ENSMUST00000071213 Trim41Q5NCC3 630 aa21.23■□□□□ 0.99
Polr2a-202ENSMUST00000071213 Cngb1E1AZ71 1325 aa21.2■□□□□ 0.98
Polr2a-202ENSMUST00000071213 Esf1Q3V1V3 845 aaKnown RBP21.18■□□□□ 0.98
Polr2a-202ENSMUST00000071213 Rtl1Q7M732 1744 aa20.99■□□□□ 0.95
Polr2a-202ENSMUST00000071213 Ccdc180J3QNE4 1664 aa20.98■□□□□ 0.95
Polr2a-202ENSMUST00000071213 Gab3Q8BSM5 595 aa20.85■□□□□ 0.93
Polr2a-202ENSMUST00000071213 Abcc8B2RUS7 1588 aa20.85■□□□□ 0.93
Polr2a-202ENSMUST00000071213 Npm2Q80W85 207 aa20.6■□□□□ 0.89
Polr2a-202ENSMUST00000071213 HrcG5E8J6 738 aa20.6■□□□□ 0.89
Polr2a-202ENSMUST00000071213 Las1lA2BE28 776 aaKnown RBP20.53■□□□□ 0.88
Polr2a-202ENSMUST00000071213 Gm35339A0A140LHH9 1649 aa20.53■□□□□ 0.88
Polr2a-202ENSMUST00000071213 Zeb1Q64318 1117 aa20.49■□□□□ 0.87
Polr2a-202ENSMUST00000071213 Acin1Q9JIX8 1338 aaKnown RBP20.47■□□□□ 0.87
Polr2a-202ENSMUST00000071213 Zcchc6Q5BLK4 1491 aaKnown RBP20.45■□□□□ 0.86
Polr2a-202ENSMUST00000071213 Myt1lP97500 1187 aa20.43■□□□□ 0.86
Polr2a-202ENSMUST00000071213 Wdr66E9Q743 1299 aa20.4■□□□□ 0.86
Polr2a-202ENSMUST00000071213 Ube2uB1AUC4 352 aa20.2■□□□□ 0.82
Polr2a-202ENSMUST00000071213 NefmP08553 848 aa20.14■□□□□ 0.81
Polr2a-202ENSMUST00000071213 UbtfP25976 765 aaKnown RBP20.07■□□□□ 0.8
Polr2a-202ENSMUST00000071213 Il27Q8K3I6 234 aa19.92■□□□□ 0.78
Polr2a-202ENSMUST00000071213 Rb1cc1Q9ESK9 1588 aa19.87■□□□□ 0.77
Polr2a-202ENSMUST00000071213 Brd4Q9ESU6 1400 aaKnown RBP19.66■□□□□ 0.74
Polr2a-202ENSMUST00000071213 Dcaf1Q80TR8 1506 aa19.63■□□□□ 0.73
Polr2a-202ENSMUST00000071213 NacadQ5SWP3 1504 aa19.6■□□□□ 0.73
Polr2a-202ENSMUST00000071213 Ap3b1Q9Z1T1 1105 aa19.56■□□□□ 0.72
Polr2a-202ENSMUST00000071213 Pcgf6Q99NA9 353 aa19.55■□□□□ 0.72
Polr2a-202ENSMUST00000071213 Cep164Q5DU05 1446 aa19.48■□□□□ 0.71
Polr2a-202ENSMUST00000071213 Baz1aO88379 1555 aa19.48■□□□□ 0.71
Polr2a-202ENSMUST00000071213 Pelp1Q9DBD5 1123 aaKnown RBP19.47■□□□□ 0.71
Polr2a-202ENSMUST00000071213 Stra8P70278 393 aa19.47■□□□□ 0.71
Polr2a-202ENSMUST00000071213 Fam50aQ9WV03 339 aaKnown RBP19.42■□□□□ 0.7
Polr2a-202ENSMUST00000071213 Mier1Q5UAK0 511 aa19.42■□□□□ 0.7
Polr2a-202ENSMUST00000071213 Chic1Q8CBW7 227 aa19.34■□□□□ 0.69
Polr2a-202ENSMUST00000071213 Npm1Q61937 292 aaKnown RBP19.34■□□□□ 0.69
Polr2a-202ENSMUST00000071213 Cdk11bP24788 784 aaKnown RBP19.33■□□□□ 0.69
Polr2a-202ENSMUST00000071213 TonslQ6NZL6 1363 aa19.3■□□□□ 0.68
Polr2a-202ENSMUST00000071213 CenpbP27790 599 aa19.28■□□□□ 0.68
Polr2a-202ENSMUST00000071213 Supt5hO55201 1082 aaKnown RBP19.27■□□□□ 0.67
Polr2a-202ENSMUST00000071213 Kdm5dQ62240 1548 aa19.26■□□□□ 0.67
Polr2a-202ENSMUST00000071213 NclP09405 707 aaKnown RBP19.23■□□□□ 0.67
Polr2a-202ENSMUST00000071213 Slc24a1Q91WD8 1130 aa19.2■□□□□ 0.66
Polr2a-202ENSMUST00000071213 Plekhg3Q4VAC9 1341 aa19.19■□□□□ 0.66
Polr2a-202ENSMUST00000071213 Nop58Q6DFW4 536 aaKnown RBP19.17■□□□□ 0.66
Polr2a-202ENSMUST00000071213 Neurod1Q60867 357 aa19.08■□□□□ 0.64
Polr2a-202ENSMUST00000071213 Lmod2Q3UHZ5 550 aa19.08■□□□□ 0.64
Polr2a-202ENSMUST00000071213 Clip1Q922J3 1391 aa19.07■□□□□ 0.64
Polr2a-202ENSMUST00000071213 Ppargc1bQ8VHJ7 1014 aa19.06■□□□□ 0.64
Polr2a-202ENSMUST00000071213 Golga3P55937 1487 aa19.05■□□□□ 0.64
Polr2a-202ENSMUST00000071213 Tnnt3Q9QZ47 272 aa19.02■□□□□ 0.63
Polr2a-202ENSMUST00000071213 NrdcQ8BHG1 1161 aa18.98■□□□□ 0.63
Polr2a-202ENSMUST00000071213 Anp32bQ9EST5 272 aaKnown RBP18.94■□□□□ 0.62
Polr2a-202ENSMUST00000071213 ClspnQ80YR7 1315 aa18.94■□□□□ 0.62
Polr2a-202ENSMUST00000071213 Ubl4bQ9CQ84 188 aa18.91■□□□□ 0.62
Polr2a-202ENSMUST00000071213 Os9Q8K2C7 672 aa18.79■□□□□ 0.6
Polr2a-202ENSMUST00000071213 Crybg2B7ZCC2 1516 aa18.77■□□□□ 0.6
Polr2a-202ENSMUST00000071213 Rsf1E9PWW9 1441 aaKnown RBP18.77■□□□□ 0.6
Polr2a-202ENSMUST00000071213 Sycp2Q9CUU3 1500 aa18.77■□□□□ 0.59
Polr2a-202ENSMUST00000071213 Eid3Q3V124 375 aa18.72■□□□□ 0.59
Polr2a-202ENSMUST00000071213 Eif5bQ05D44 1216 aaKnown RBP18.72■□□□□ 0.59
Polr2a-202ENSMUST00000071213 Ccer2J3QPU5 274 aa18.71■□□□□ 0.59
Polr2a-202ENSMUST00000071213 Kif15Q6P9L6 1387 aa18.7■□□□□ 0.58
Polr2a-202ENSMUST00000071213 Ercc6F8VPZ5 1481 aa18.7■□□□□ 0.58
Polr2a-202ENSMUST00000071213 ScribQ80U72 1612 aa18.69■□□□□ 0.58
Polr2a-202ENSMUST00000071213 Sall2Q9QX96 1004 aa18.68■□□□□ 0.58
Polr2a-202ENSMUST00000071213 Setd5Q5XJV7 1441 aa18.65■□□□□ 0.58
Polr2a-202ENSMUST00000071213 BlmO88700 1416 aa18.65■□□□□ 0.58
Polr2a-202ENSMUST00000071213 Zbtb7cQ8VCZ7 619 aa18.64■□□□□ 0.58
Polr2a-202ENSMUST00000071213 NeflP08551 543 aa18.63■□□□□ 0.57
Polr2a-202ENSMUST00000071213 Ccdc18Q640L5 1455 aa18.6■□□□□ 0.57
Polr2a-202ENSMUST00000071213 Hnrnpul2Q00PI9 745 aaKnown RBP18.59■□□□□ 0.57
Polr2a-202ENSMUST00000071213 Smarca2Q6DIC0 1577 aa18.57■□□□□ 0.56
Polr2a-202ENSMUST00000071213 Ccdc88bQ4QRL3 1481 aa18.54■□□□□ 0.56
Polr2a-202ENSMUST00000071213 Pds5bQ4VA53 1446 aaKnown RBP18.53■□□□□ 0.56
Polr2a-202ENSMUST00000071213 Eea1Q8BL66 1411 aa18.53■□□□□ 0.56
Polr2a-202ENSMUST00000071213 Fkbp15Q6P9Q6 1216 aaKnown RBP18.5■□□□□ 0.55
Polr2a-202ENSMUST00000071213 Fmn1Q05860 1466 aa18.49■□□□□ 0.55
Polr2a-202ENSMUST00000071213 Myt1Q8CFC2 1127 aa18.49■□□□□ 0.55
Polr2a-202ENSMUST00000071213 Ifnlr1Q8CGK5 535 aa18.48■□□□□ 0.55
Polr2a-202ENSMUST00000071213 Mapk8ip2Q9ERE9 830 aa18.48■□□□□ 0.55
Polr2a-202ENSMUST00000071213 Hdac5Q9Z2V6 1113 aa18.46■□□□□ 0.55
Polr2a-202ENSMUST00000071213 Chic2Q9D9G3 165 aa18.46■□□□□ 0.55
Polr2a-202ENSMUST00000071213 CftrP26361 1476 aa18.44■□□□□ 0.54
Polr2a-202ENSMUST00000071213 Cecr2E9Q2Z1 1453 aa18.42■□□□□ 0.54
Polr2a-202ENSMUST00000071213 Anks4bQ8K3X6 423 aa18.42■□□□□ 0.54
Polr2a-202ENSMUST00000071213 Erich6D3Z6S9 713 aa18.38■□□□□ 0.53
Polr2a-202ENSMUST00000071213 Cep162Q6ZQ06 1403 aa18.36■□□□□ 0.53
Polr2a-202ENSMUST00000071213 Synj1Q8CHC4 1574 aa18.35■□□□□ 0.53
Polr2a-202ENSMUST00000071213 Zbtb4Q5F293 982 aa18.33■□□□□ 0.53
Polr2a-202ENSMUST00000071213 Anp32aO35381 247 aa18.28■□□□□ 0.52
Polr2a-202ENSMUST00000071213 Rtl5Q5DTT4 599 aa18.27■□□□□ 0.52
Polr2a-202ENSMUST00000071213 Clstn2Q9ER65 966 aa18.26■□□□□ 0.51
Polr2a-202ENSMUST00000071213 Amer1Q7TS75 1132 aa18.25■□□□□ 0.51
Polr2a-202ENSMUST00000071213 Gm13697A2AK42 830 aa18.25■□□□□ 0.51
Polr2a-202ENSMUST00000071213 Smarca4Q3TKT4 1613 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms