RNA–Protein interactions for RNA: ENSMUST00000066140.12

Pcdhgc4-201, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhgc4, Length 5,024 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc4-201ENSMUST00000066140 Rhox8Q6VSS7 320 aa21.38■■□□□ 1.01
Pcdhgc4-201ENSMUST00000066140 NischQ80TM9 1593 aa20.25■□□□□ 0.83
Pcdhgc4-201ENSMUST00000066140 Rpgrip1Q9EPQ2 1331 aa19.48■□□□□ 0.71
Pcdhgc4-201ENSMUST00000066140 Ccdc136Q3TVA9 1136 aa19.23■□□□□ 0.67
Pcdhgc4-201ENSMUST00000066140 Abcc9P70170 1546 aa19.17■□□□□ 0.66
Pcdhgc4-201ENSMUST00000066140 Ehmt2Q9Z148 1263 aaKnown RBP18.99■□□□□ 0.63
Pcdhgc4-201ENSMUST00000066140 Trim41Q5NCC3 630 aa18.96■□□□□ 0.63
Pcdhgc4-201ENSMUST00000066140 Cngb1E1AZ71 1325 aa18.84■□□□□ 0.61
Pcdhgc4-201ENSMUST00000066140 Ccdc180J3QNE4 1664 aa18.8■□□□□ 0.6
Pcdhgc4-201ENSMUST00000066140 Esf1Q3V1V3 845 aaKnown RBP18.8■□□□□ 0.6
Pcdhgc4-201ENSMUST00000066140 Rtl1Q7M732 1744 aa18.79■□□□□ 0.6
Pcdhgc4-201ENSMUST00000066140 Abcc8B2RUS7 1588 aa18.74■□□□□ 0.59
Pcdhgc4-201ENSMUST00000066140 Gab3Q8BSM5 595 aa18.58■□□□□ 0.56
Pcdhgc4-201ENSMUST00000066140 HrcG5E8J6 738 aa18.52■□□□□ 0.56
Pcdhgc4-201ENSMUST00000066140 Gm35339A0A140LHH9 1649 aa18.44■□□□□ 0.54
Pcdhgc4-201ENSMUST00000066140 Acin1Q9JIX8 1338 aaKnown RBP18.41■□□□□ 0.54
Pcdhgc4-201ENSMUST00000066140 Las1lA2BE28 776 aaKnown RBP18.29■□□□□ 0.52
Pcdhgc4-201ENSMUST00000066140 Npm2Q80W85 207 aa18.29■□□□□ 0.52
Pcdhgc4-201ENSMUST00000066140 Zcchc6Q5BLK4 1491 aaKnown RBP18.27■□□□□ 0.51
Pcdhgc4-201ENSMUST00000066140 Zeb1Q64318 1117 aa18.18■□□□□ 0.5
Pcdhgc4-201ENSMUST00000066140 Wdr66E9Q743 1299 aa18.17■□□□□ 0.5
Pcdhgc4-201ENSMUST00000066140 Myt1lP97500 1187 aa18.17■□□□□ 0.5
Pcdhgc4-201ENSMUST00000066140 NefmP08553 848 aa18.06■□□□□ 0.48
Pcdhgc4-201ENSMUST00000066140 UbtfP25976 765 aaKnown RBP17.9■□□□□ 0.46
Pcdhgc4-201ENSMUST00000066140 Ube2uB1AUC4 352 aa17.88■□□□□ 0.45
Pcdhgc4-201ENSMUST00000066140 Rb1cc1Q9ESK9 1588 aa17.78■□□□□ 0.44
Pcdhgc4-201ENSMUST00000066140 Il27Q8K3I6 234 aa17.69■□□□□ 0.42
Pcdhgc4-201ENSMUST00000066140 Dcaf1Q80TR8 1506 aa17.65■□□□□ 0.42
Pcdhgc4-201ENSMUST00000066140 Pcgf6Q99NA9 353 aa17.62■□□□□ 0.41
Pcdhgc4-201ENSMUST00000066140 Brd4Q9ESU6 1400 aaKnown RBP17.61■□□□□ 0.41
Pcdhgc4-201ENSMUST00000066140 NacadQ5SWP3 1504 aa17.54■□□□□ 0.4
Pcdhgc4-201ENSMUST00000066140 Cep164Q5DU05 1446 aa17.53■□□□□ 0.4
Pcdhgc4-201ENSMUST00000066140 Baz1aO88379 1555 aa17.48■□□□□ 0.39
Pcdhgc4-201ENSMUST00000066140 Mier1Q5UAK0 511 aa17.4■□□□□ 0.38
Pcdhgc4-201ENSMUST00000066140 Stra8P70278 393 aa17.38■□□□□ 0.37
Pcdhgc4-201ENSMUST00000066140 Ap3b1Q9Z1T1 1105 aa17.37■□□□□ 0.37
Pcdhgc4-201ENSMUST00000066140 Chic1Q8CBW7 227 aa17.35■□□□□ 0.37
Pcdhgc4-201ENSMUST00000066140 Supt5hO55201 1082 aaKnown RBP17.33■□□□□ 0.37
Pcdhgc4-201ENSMUST00000066140 Pelp1Q9DBD5 1123 aaKnown RBP17.33■□□□□ 0.36
Pcdhgc4-201ENSMUST00000066140 Cdk11bP24788 784 aaKnown RBP17.32■□□□□ 0.36
Pcdhgc4-201ENSMUST00000066140 Fam50aQ9WV03 339 aaKnown RBP17.3■□□□□ 0.36
Pcdhgc4-201ENSMUST00000066140 CenpbP27790 599 aa17.27■□□□□ 0.35
Pcdhgc4-201ENSMUST00000066140 Kdm5dQ62240 1548 aa17.27■□□□□ 0.35
Pcdhgc4-201ENSMUST00000066140 TonslQ6NZL6 1363 aa17.26■□□□□ 0.35
Pcdhgc4-201ENSMUST00000066140 Nop58Q6DFW4 536 aaKnown RBP17.2■□□□□ 0.34
Pcdhgc4-201ENSMUST00000066140 Npm1Q61937 292 aaKnown RBP17.19■□□□□ 0.34
Pcdhgc4-201ENSMUST00000066140 Plekhg3Q4VAC9 1341 aa17.15■□□□□ 0.34
Pcdhgc4-201ENSMUST00000066140 NclP09405 707 aaKnown RBP17.14■□□□□ 0.34
Pcdhgc4-201ENSMUST00000066140 Golga3P55937 1487 aa17.11■□□□□ 0.33
Pcdhgc4-201ENSMUST00000066140 Myt1Q8CFC2 1127 aa17.1■□□□□ 0.33
Pcdhgc4-201ENSMUST00000066140 Clip1Q922J3 1391 aa17.07■□□□□ 0.32
Pcdhgc4-201ENSMUST00000066140 Slc24a1Q91WD8 1130 aa17.07■□□□□ 0.32
Pcdhgc4-201ENSMUST00000066140 Ppargc1bQ8VHJ7 1014 aa17.03■□□□□ 0.32
Pcdhgc4-201ENSMUST00000066140 Tnnt3Q9QZ47 272 aa17.02■□□□□ 0.32
Pcdhgc4-201ENSMUST00000066140 ClspnQ80YR7 1315 aa17.01■□□□□ 0.31
Pcdhgc4-201ENSMUST00000066140 Lmod2Q3UHZ5 550 aa16.99■□□□□ 0.31
Pcdhgc4-201ENSMUST00000066140 Neurod1Q60867 357 aa16.95■□□□□ 0.3
Pcdhgc4-201ENSMUST00000066140 NrdcQ8BHG1 1161 aa16.91■□□□□ 0.3
Pcdhgc4-201ENSMUST00000066140 Rsf1E9PWW9 1441 aaKnown RBP16.9■□□□□ 0.3
Pcdhgc4-201ENSMUST00000066140 Crybg2B7ZCC2 1516 aa16.9■□□□□ 0.3
Pcdhgc4-201ENSMUST00000066140 Anp32bQ9EST5 272 aaKnown RBP16.86■□□□□ 0.29
Pcdhgc4-201ENSMUST00000066140 Sall2Q9QX96 1004 aa16.83■□□□□ 0.29
Pcdhgc4-201ENSMUST00000066140 Sycp2Q9CUU3 1500 aa16.82■□□□□ 0.28
Pcdhgc4-201ENSMUST00000066140 ScribQ80U72 1612 aa16.81■□□□□ 0.28
Pcdhgc4-201ENSMUST00000066140 Ubl4bQ9CQ84 188 aa16.8■□□□□ 0.28
Pcdhgc4-201ENSMUST00000066140 Eid3Q3V124 375 aa16.78■□□□□ 0.28
Pcdhgc4-201ENSMUST00000066140 Ccer2J3QPU5 274 aa16.76■□□□□ 0.27
Pcdhgc4-201ENSMUST00000066140 Smarca2Q6DIC0 1577 aa16.71■□□□□ 0.27
Pcdhgc4-201ENSMUST00000066140 Setd5Q5XJV7 1441 aa16.7■□□□□ 0.26
Pcdhgc4-201ENSMUST00000066140 Kif15Q6P9L6 1387 aa16.7■□□□□ 0.26
Pcdhgc4-201ENSMUST00000066140 Ccdc88bQ4QRL3 1481 aa16.68■□□□□ 0.26
Pcdhgc4-201ENSMUST00000066140 BlmO88700 1416 aa16.67■□□□□ 0.26
Pcdhgc4-201ENSMUST00000066140 Eif5bQ05D44 1216 aaKnown RBP16.65■□□□□ 0.26
Pcdhgc4-201ENSMUST00000066140 Os9Q8K2C7 672 aa16.63■□□□□ 0.25
Pcdhgc4-201ENSMUST00000066140 Ercc6F8VPZ5 1481 aa16.63■□□□□ 0.25
Pcdhgc4-201ENSMUST00000066140 Anks4bQ8K3X6 423 aa16.61■□□□□ 0.25
Pcdhgc4-201ENSMUST00000066140 Eea1Q8BL66 1411 aa16.61■□□□□ 0.25
Pcdhgc4-201ENSMUST00000066140 Fmn1Q05860 1466 aa16.59■□□□□ 0.25
Pcdhgc4-201ENSMUST00000066140 Ccdc18Q640L5 1455 aa16.59■□□□□ 0.25
Pcdhgc4-201ENSMUST00000066140 NeflP08551 543 aa16.58■□□□□ 0.24
Pcdhgc4-201ENSMUST00000066140 CftrP26361 1476 aa16.58■□□□□ 0.24
Pcdhgc4-201ENSMUST00000066140 Pds5bQ4VA53 1446 aaKnown RBP16.55■□□□□ 0.24
Pcdhgc4-201ENSMUST00000066140 Cecr2E9Q2Z1 1453 aa16.55■□□□□ 0.24
Pcdhgc4-201ENSMUST00000066140 Zbtb7cQ8VCZ7 619 aa16.52■□□□□ 0.24
Pcdhgc4-201ENSMUST00000066140 Mapk8ip2Q9ERE9 830 aa16.51■□□□□ 0.23
Pcdhgc4-201ENSMUST00000066140 Cep162Q6ZQ06 1403 aa16.5■□□□□ 0.23
Pcdhgc4-201ENSMUST00000066140 Hnrnpul2Q00PI9 745 aaKnown RBP16.48■□□□□ 0.23
Pcdhgc4-201ENSMUST00000066140 Chic2Q9D9G3 165 aa16.46■□□□□ 0.23
Pcdhgc4-201ENSMUST00000066140 Synj1Q8CHC4 1574 aa16.45■□□□□ 0.22
Pcdhgc4-201ENSMUST00000066140 Aebp2Q9Z248 504 aaKnown RBP16.42■□□□□ 0.22
Pcdhgc4-201ENSMUST00000066140 Hdac5Q9Z2V6 1113 aa16.41■□□□□ 0.22
Pcdhgc4-201ENSMUST00000066140 Fkbp15Q6P9Q6 1216 aaKnown RBP16.4■□□□□ 0.22
Pcdhgc4-201ENSMUST00000066140 Anp32aO35381 247 aa16.38■□□□□ 0.21
Pcdhgc4-201ENSMUST00000066140 Rtl5Q5DTT4 599 aa16.37■□□□□ 0.21
Pcdhgc4-201ENSMUST00000066140 Csrnp3P59055 597 aa16.36■□□□□ 0.21
Pcdhgc4-201ENSMUST00000066140 Aplp2Q06335 707 aa16.33■□□□□ 0.2
Pcdhgc4-201ENSMUST00000066140 Smarca4Q3TKT4 1613 aaKnown RBP16.33■□□□□ 0.2
Pcdhgc4-201ENSMUST00000066140 Ifnlr1Q8CGK5 535 aa16.31■□□□□ 0.2
Pcdhgc4-201ENSMUST00000066140 Atad2bE9Q166 1460 aaKnown RBP16.3■□□□□ 0.2
Pcdhgc4-201ENSMUST00000066140 Cttnbp2B9EJA2 1648 aa16.3■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms