RNA–Protein interactions for RNA: ENSMUST00000062528.8

Cdh20-201, Transcript of Cadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdh20, Length 4,012 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20-201ENSMUST00000062528 Rpgrip1Q9EPQ2 1331 aa19.17■□□□□ 0.66
Cdh20-201ENSMUST00000062528 Pcgf6Q99NA9 353 aa18.29■□□□□ 0.52
Cdh20-201ENSMUST00000062528 Las1lA2BE28 776 aaKnown RBP18.26■□□□□ 0.51
Cdh20-201ENSMUST00000062528 Acin1Q9JIX8 1338 aaKnown RBP18.08■□□□□ 0.49
Cdh20-201ENSMUST00000062528 DiexfQ8BTT6 772 aaKnown RBP18.02■□□□□ 0.48
Cdh20-201ENSMUST00000062528 CenpbP27790 599 aa17.97■□□□□ 0.47
Cdh20-201ENSMUST00000062528 Myt1Q8CFC2 1127 aa17.97■□□□□ 0.47
Cdh20-201ENSMUST00000062528 Ehmt2Q9Z148 1263 aaKnown RBP17.81■□□□□ 0.44
Cdh20-201ENSMUST00000062528 Neurod1Q60867 357 aa17.64■□□□□ 0.41
Cdh20-201ENSMUST00000062528 Supt5hO55201 1082 aaKnown RBP17.51■□□□□ 0.39
Cdh20-201ENSMUST00000062528 Amer1Q7TS75 1132 aa17.48■□□□□ 0.39
Cdh20-201ENSMUST00000062528 1700123L14RikQ3V2K7 440 aa17.4■□□□□ 0.38
Cdh20-201ENSMUST00000062528 Bcl11aQ9QYE3 773 aa17.39■□□□□ 0.37
Cdh20-201ENSMUST00000062528 Rhox8Q6VSS7 320 aa17.36■□□□□ 0.37
Cdh20-201ENSMUST00000062528 Cngb1E1AZ71 1325 aa17.31■□□□□ 0.36
Cdh20-201ENSMUST00000062528 Csrnp3P59055 597 aa17.19■□□□□ 0.34
Cdh20-201ENSMUST00000062528 Zeb1Q64318 1117 aa17.1■□□□□ 0.33
Cdh20-201ENSMUST00000062528 Anks4bQ8K3X6 423 aa17■□□□□ 0.31
Cdh20-201ENSMUST00000062528 Trim41Q5NCC3 630 aa16.99■□□□□ 0.31
Cdh20-201ENSMUST00000062528 Aplp2Q06335 707 aa16.99■□□□□ 0.31
Cdh20-201ENSMUST00000062528 PrkcshO08795 521 aa16.93■□□□□ 0.3
Cdh20-201ENSMUST00000062528 Ccdc180J3QNE4 1664 aa16.91■□□□□ 0.3
Cdh20-201ENSMUST00000062528 NischQ80TM9 1593 aa16.85■□□□□ 0.29
Cdh20-201ENSMUST00000062528 Gm38655A0A286YDK6 273 aa16.82■□□□□ 0.28
Cdh20-201ENSMUST00000062528 Rtl1Q7M732 1744 aa16.7■□□□□ 0.26
Cdh20-201ENSMUST00000062528 Cdk11bP24788 784 aaKnown RBP16.69■□□□□ 0.26
Cdh20-201ENSMUST00000062528 Wdr66E9Q743 1299 aa16.65■□□□□ 0.26
Cdh20-201ENSMUST00000062528 Sall2Q9QX96 1004 aa16.6■□□□□ 0.25
Cdh20-201ENSMUST00000062528 Nop58Q6DFW4 536 aaKnown RBP16.55■□□□□ 0.24
Cdh20-201ENSMUST00000062528 Dcaf1Q80TR8 1506 aa16.55■□□□□ 0.24
Cdh20-201ENSMUST00000062528 Pelp1Q9DBD5 1123 aaKnown RBP16.55■□□□□ 0.24
Cdh20-201ENSMUST00000062528 Fam71e1A1L3C1 212 aa16.52■□□□□ 0.24
Cdh20-201ENSMUST00000062528 NefmP08553 848 aa16.5■□□□□ 0.23
Cdh20-201ENSMUST00000062528 Ifnlr1Q8CGK5 535 aa16.48■□□□□ 0.23
Cdh20-201ENSMUST00000062528 Ttbk1Q6PCN3 1308 aa16.42■□□□□ 0.22
Cdh20-201ENSMUST00000062528 Rtl5Q5DTT4 599 aa16.31■□□□□ 0.2
Cdh20-201ENSMUST00000062528 Mapk8ip2Q9ERE9 830 aa16.29■□□□□ 0.2
Cdh20-201ENSMUST00000062528 HrcG5E8J6 738 aa16.28■□□□□ 0.2
Cdh20-201ENSMUST00000062528 Pknox2Q8BG99 474 aa16.21■□□□□ 0.19
Cdh20-201ENSMUST00000062528 Ppargc1bQ8VHJ7 1014 aa16.18■□□□□ 0.18
Cdh20-201ENSMUST00000062528 Tnnt3Q9QZ47 272 aa16.15■□□□□ 0.18
Cdh20-201ENSMUST00000062528 Hdac5Q9Z2V6 1113 aa16.14■□□□□ 0.17
Cdh20-201ENSMUST00000062528 Anp32aO35381 247 aa16.12■□□□□ 0.17
Cdh20-201ENSMUST00000062528 Abcc9P70170 1546 aa16.05■□□□□ 0.16
Cdh20-201ENSMUST00000062528 SafbD3YXK2 937 aaKnown RBP16.04■□□□□ 0.16
Cdh20-201ENSMUST00000062528 ClspnQ80YR7 1315 aa16.03■□□□□ 0.16
Cdh20-201ENSMUST00000062528 Mier1Q5UAK0 511 aa15.99■□□□□ 0.15
Cdh20-201ENSMUST00000062528 NrdcQ8BHG1 1161 aa15.98■□□□□ 0.15
Cdh20-201ENSMUST00000062528 Fgd1P52734 960 aa15.92■□□□□ 0.14
Cdh20-201ENSMUST00000062528 Aebp2Q9Z248 504 aaKnown RBP15.88■□□□□ 0.13
Cdh20-201ENSMUST00000062528 Hnrnpul2Q00PI9 745 aaKnown RBP15.88■□□□□ 0.13
Cdh20-201ENSMUST00000062528 Gtf3c3Q3TMP1 882 aa15.86■□□□□ 0.13
Cdh20-201ENSMUST00000062528 Plcd4Q8K3R3 807 aa15.81■□□□□ 0.12
Cdh20-201ENSMUST00000062528 Abcc8B2RUS7 1588 aa15.8■□□□□ 0.12
Cdh20-201ENSMUST00000062528 Irx3P81067 507 aa15.79■□□□□ 0.12
Cdh20-201ENSMUST00000062528 Ccdc136Q3TVA9 1136 aa15.79■□□□□ 0.12
Cdh20-201ENSMUST00000062528 4933416C03RikQ3V063 378 aa15.79■□□□□ 0.12
Cdh20-201ENSMUST00000062528 Gm35339A0A140LHH9 1649 aa15.75■□□□□ 0.11
Cdh20-201ENSMUST00000062528 Ccdc9Q8VC31 543 aaKnown RBP15.74■□□□□ 0.11
Cdh20-201ENSMUST00000062528 Upf2A2AT37 1269 aaKnown RBP15.72■□□□□ 0.11
Cdh20-201ENSMUST00000062528 Ap3b1Q9Z1T1 1105 aa15.68■□□□□ 0.1
Cdh20-201ENSMUST00000062528 Stra8P70278 393 aa15.66■□□□□ 0.1
Cdh20-201ENSMUST00000062528 Il27Q8K3I6 234 aa15.65■□□□□ 0.1
Cdh20-201ENSMUST00000062528 Ccdc27Q3V036 639 aa15.63■□□□□ 0.09
Cdh20-201ENSMUST00000062528 Gab3Q8BSM5 595 aa15.61■□□□□ 0.09
Cdh20-201ENSMUST00000062528 Zcchc6Q5BLK4 1491 aaKnown RBP15.6■□□□□ 0.09
Cdh20-201ENSMUST00000062528 Hsp90aa1P07901 733 aaKnown RBP15.57■□□□□ 0.08
Cdh20-201ENSMUST00000062528 UbtfP25976 765 aaKnown RBP15.55■□□□□ 0.08
Cdh20-201ENSMUST00000062528 Calr4Q3TQS0 420 aa15.55■□□□□ 0.08
Cdh20-201ENSMUST00000062528 Supt16hQ920B9 1047 aa15.55■□□□□ 0.08
Cdh20-201ENSMUST00000062528 TonslQ6NZL6 1363 aa15.54■□□□□ 0.08
Cdh20-201ENSMUST00000062528 Nolc1E9Q5C9 702 aaKnown RBP15.54■□□□□ 0.08
Cdh20-201ENSMUST00000062528 Plppr3Q7TPB0 716 aa15.54■□□□□ 0.08
Cdh20-201ENSMUST00000062528 DaxxO35613 739 aa15.52■□□□□ 0.07
Cdh20-201ENSMUST00000062528 Gtf3c5Q8R2T8 520 aa15.49■□□□□ 0.07
Cdh20-201ENSMUST00000062528 Ipo4Q8VI75 1082 aa15.48■□□□□ 0.07
Cdh20-201ENSMUST00000062528 Ppp4r2Q0VGB7 417 aa15.48■□□□□ 0.07
Cdh20-201ENSMUST00000062528 Taok2Q6ZQ29 1240 aa15.46■□□□□ 0.07
Cdh20-201ENSMUST00000062528 Esf1Q3V1V3 845 aaKnown RBP15.46■□□□□ 0.07
Cdh20-201ENSMUST00000062528 CatipB9EKE5 520 aa15.45■□□□□ 0.06
Cdh20-201ENSMUST00000062528 BccipQ9CWI3 316 aa15.43■□□□□ 0.06
Cdh20-201ENSMUST00000062528 Rtn4Q99P72 1162 aaKnown RBP15.41■□□□□ 0.06
Cdh20-201ENSMUST00000062528 Wdr43Q6ZQL4 677 aaKnown RBP15.39■□□□□ 0.05
Cdh20-201ENSMUST00000062528 Slc24a1Q91WD8 1130 aa15.39■□□□□ 0.05
Cdh20-201ENSMUST00000062528 NeflP08551 543 aa15.37■□□□□ 0.05
Cdh20-201ENSMUST00000062528 Zfp777B9EKF4 885 aa15.33■□□□□ 0.05
Cdh20-201ENSMUST00000062528 Eif5bQ05D44 1216 aaKnown RBP15.29■□□□□ 0.04
Cdh20-201ENSMUST00000062528 Znf316Q6PGE4 1016 aa15.27■□□□□ 0.04
Cdh20-201ENSMUST00000062528 Myt1lP97500 1187 aa15.25■□□□□ 0.03
Cdh20-201ENSMUST00000062528 Cep164Q5DU05 1446 aa15.24■□□□□ 0.03
Cdh20-201ENSMUST00000062528 AampJ3QN89 436 aa15.2■□□□□ 0.02
Cdh20-201ENSMUST00000062528 Zbtb4Q5F293 982 aa15.17■□□□□ 0.02
Cdh20-201ENSMUST00000062528 Dnttip2Q8R2M2 758 aaKnown RBP15.15■□□□□ 0.02
Cdh20-201ENSMUST00000062528 Pdcl3Q8BVF2 240 aa15.14■□□□□ 0.01
Cdh20-201ENSMUST00000062528 Ythdc1E9Q5K9 736 aaKnown RBP15.12■□□□□ 0.01
Cdh20-201ENSMUST00000062528 Pak3Q61036 559 aa15.12■□□□□ 0.01
Cdh20-201ENSMUST00000062528 Anp32bQ9EST5 272 aaKnown RBP15.1■□□□□ 0.01
Cdh20-201ENSMUST00000062528 Znf692Q3U381 531 aa15.1■□□□□ 0.01
Cdh20-201ENSMUST00000062528 Ipo9Q91YE6 1041 aa15.09■□□□□ 0.01
Cdh20-201ENSMUST00000062528 Znf710Q3U288 666 aa15.08■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms