RNA–Protein interactions for RNA: ENSMUST00000061717.3

Pcdhb6-201, Transcript of Protocadherin beta-6, mousemouse

APPRIS P1 BASIC

Gene Pcdhb6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6-201ENSMUST00000061717 NischQ80TM9 1593 aa17.81■□□□□ 0.44
Pcdhb6-201ENSMUST00000061717 Rhox8Q6VSS7 320 aa17.38■□□□□ 0.37
Pcdhb6-201ENSMUST00000061717 Abcc9P70170 1546 aa17.08■□□□□ 0.33
Pcdhb6-201ENSMUST00000061717 Gm35339A0A140LHH9 1649 aa16.95■□□□□ 0.3
Pcdhb6-201ENSMUST00000061717 Abcc8B2RUS7 1588 aa16.79■□□□□ 0.28
Pcdhb6-201ENSMUST00000061717 Rpgrip1Q9EPQ2 1331 aa16.26■□□□□ 0.19
Pcdhb6-201ENSMUST00000061717 Ccdc136Q3TVA9 1136 aa16.07■□□□□ 0.16
Pcdhb6-201ENSMUST00000061717 Rtl1Q7M732 1744 aa15.81■□□□□ 0.12
Pcdhb6-201ENSMUST00000061717 Ccdc180J3QNE4 1664 aa15.73■□□□□ 0.11
Pcdhb6-201ENSMUST00000061717 Ehmt2Q9Z148 1263 aaKnown RBP15.72■□□□□ 0.11
Pcdhb6-201ENSMUST00000061717 ScribQ80U72 1612 aa15.63■□□□□ 0.09
Pcdhb6-201ENSMUST00000061717 Rb1cc1Q9ESK9 1588 aa15.61■□□□□ 0.09
Pcdhb6-201ENSMUST00000061717 Acin1Q9JIX8 1338 aaKnown RBP15.56■□□□□ 0.08
Pcdhb6-201ENSMUST00000061717 Zcchc6Q5BLK4 1491 aaKnown RBP15.54■□□□□ 0.08
Pcdhb6-201ENSMUST00000061717 Kdm5dQ62240 1548 aa15.48■□□□□ 0.07
Pcdhb6-201ENSMUST00000061717 Trim41Q5NCC3 630 aa15.46■□□□□ 0.07
Pcdhb6-201ENSMUST00000061717 Cngb1E1AZ71 1325 aa15.4■□□□□ 0.06
Pcdhb6-201ENSMUST00000061717 Pcgf6Q99NA9 353 aa15.37■□□□□ 0.05
Pcdhb6-201ENSMUST00000061717 Dcaf1Q80TR8 1506 aa15.37■□□□□ 0.05
Pcdhb6-201ENSMUST00000061717 NacadQ5SWP3 1504 aa15.34■□□□□ 0.05
Pcdhb6-201ENSMUST00000061717 Baz1aO88379 1555 aa15.31■□□□□ 0.04
Pcdhb6-201ENSMUST00000061717 Gab3Q8BSM5 595 aa15.28■□□□□ 0.04
Pcdhb6-201ENSMUST00000061717 HrcG5E8J6 738 aa15.27■□□□□ 0.03
Pcdhb6-201ENSMUST00000061717 Esf1Q3V1V3 845 aaKnown RBP15.22■□□□□ 0.03
Pcdhb6-201ENSMUST00000061717 Las1lA2BE28 776 aaKnown RBP15.12■□□□□ 0.01
Pcdhb6-201ENSMUST00000061717 Chic1Q8CBW7 227 aa14.99□□□□□ -0.01
Pcdhb6-201ENSMUST00000061717 Sycp2Q9CUU3 1500 aa14.97□□□□□ -0.01
Pcdhb6-201ENSMUST00000061717 Supt5hO55201 1082 aaKnown RBP14.94□□□□□ -0.02
Pcdhb6-201ENSMUST00000061717 Smarca2Q6DIC0 1577 aa14.88□□□□□ -0.03
Pcdhb6-201ENSMUST00000061717 DiexfQ8BTT6 772 aaKnown RBP14.88□□□□□ -0.03
Pcdhb6-201ENSMUST00000061717 Cecr2E9Q2Z1 1453 aa14.86□□□□□ -0.03
Pcdhb6-201ENSMUST00000061717 Brd4Q9ESU6 1400 aaKnown RBP14.83□□□□□ -0.04
Pcdhb6-201ENSMUST00000061717 Zeb1Q64318 1117 aa14.81□□□□□ -0.04
Pcdhb6-201ENSMUST00000061717 Neurod1Q60867 357 aa14.8□□□□□ -0.04
Pcdhb6-201ENSMUST00000061717 Crybg2B7ZCC2 1516 aa14.8□□□□□ -0.04
Pcdhb6-201ENSMUST00000061717 Cep164Q5DU05 1446 aa14.78□□□□□ -0.04
Pcdhb6-201ENSMUST00000061717 Myt1lP97500 1187 aa14.77□□□□□ -0.05
Pcdhb6-201ENSMUST00000061717 Rsf1E9PWW9 1441 aaKnown RBP14.74□□□□□ -0.05
Pcdhb6-201ENSMUST00000061717 Npm2Q80W85 207 aa14.67□□□□□ -0.06
Pcdhb6-201ENSMUST00000061717 Ccdc88bQ4QRL3 1481 aa14.66□□□□□ -0.06
Pcdhb6-201ENSMUST00000061717 Golga3P55937 1487 aa14.63□□□□□ -0.07
Pcdhb6-201ENSMUST00000061717 Il27Q8K3I6 234 aa14.62□□□□□ -0.07
Pcdhb6-201ENSMUST00000061717 Synj1Q8CHC4 1574 aa14.61□□□□□ -0.07
Pcdhb6-201ENSMUST00000061717 CenpbP27790 599 aa14.61□□□□□ -0.07
Pcdhb6-201ENSMUST00000061717 BicraF8VPZ9 1578 aa14.6□□□□□ -0.07
Pcdhb6-201ENSMUST00000061717 UbtfP25976 765 aaKnown RBP14.58□□□□□ -0.08
Pcdhb6-201ENSMUST00000061717 Myt1Q8CFC2 1127 aa14.56□□□□□ -0.08
Pcdhb6-201ENSMUST00000061717 CftrP26361 1476 aa14.54□□□□□ -0.08
Pcdhb6-201ENSMUST00000061717 NefmP08553 848 aa14.47□□□□□ -0.09
Pcdhb6-201ENSMUST00000061717 Wdr66E9Q743 1299 aa14.46□□□□□ -0.09
Pcdhb6-201ENSMUST00000061717 Mier1Q5UAK0 511 aa14.44□□□□□ -0.1
Pcdhb6-201ENSMUST00000061717 1700123L14RikQ3V2K7 440 aa14.43□□□□□ -0.1
Pcdhb6-201ENSMUST00000061717 Amer1Q7TS75 1132 aa14.42□□□□□ -0.1
Pcdhb6-201ENSMUST00000061717 Csrnp3P59055 597 aa14.41□□□□□ -0.1
Pcdhb6-201ENSMUST00000061717 Ap3b1Q9Z1T1 1105 aa14.37□□□□□ -0.11
Pcdhb6-201ENSMUST00000061717 Anks4bQ8K3X6 423 aa14.36□□□□□ -0.11
Pcdhb6-201ENSMUST00000061717 Smarca4Q3TKT4 1613 aaKnown RBP14.34□□□□□ -0.11
Pcdhb6-201ENSMUST00000061717 Sall2Q9QX96 1004 aa14.32□□□□□ -0.12
Pcdhb6-201ENSMUST00000061717 Plekhg3Q4VAC9 1341 aa14.32□□□□□ -0.12
Pcdhb6-201ENSMUST00000061717 Bcl11aQ9QYE3 773 aa14.31□□□□□ -0.12
Pcdhb6-201ENSMUST00000061717 Cttnbp2B9EJA2 1648 aa14.3□□□□□ -0.12
Pcdhb6-201ENSMUST00000061717 Cdk11bP24788 784 aaKnown RBP14.29□□□□□ -0.12
Pcdhb6-201ENSMUST00000061717 Cc2d2aQ8CFW7 1633 aa14.25□□□□□ -0.13
Pcdhb6-201ENSMUST00000061717 Ppargc1bQ8VHJ7 1014 aa14.22□□□□□ -0.13
Pcdhb6-201ENSMUST00000061717 Nop58Q6DFW4 536 aaKnown RBP14.22□□□□□ -0.13
Pcdhb6-201ENSMUST00000061717 Iqgap2Q3UQ44 1575 aa14.21□□□□□ -0.13
Pcdhb6-201ENSMUST00000061717 Aplp2Q06335 707 aa14.2□□□□□ -0.14
Pcdhb6-201ENSMUST00000061717 Fmn1Q05860 1466 aa14.18□□□□□ -0.14
Pcdhb6-201ENSMUST00000061717 Atad2bE9Q166 1460 aaKnown RBP14.17□□□□□ -0.14
Pcdhb6-201ENSMUST00000061717 PrkcshO08795 521 aa14.17□□□□□ -0.14
Pcdhb6-201ENSMUST00000061717 Pds5bQ4VA53 1446 aaKnown RBP14.16□□□□□ -0.14
Pcdhb6-201ENSMUST00000061717 Kif15Q6P9L6 1387 aa14.16□□□□□ -0.14
Pcdhb6-201ENSMUST00000061717 Clip1Q922J3 1391 aa14.15□□□□□ -0.14
Pcdhb6-201ENSMUST00000061717 Top2bQ64511 1612 aa14.14□□□□□ -0.15
Pcdhb6-201ENSMUST00000061717 Gm38655A0A286YDK6 273 aa14.13□□□□□ -0.15
Pcdhb6-201ENSMUST00000061717 Rapgef2Q8CHG7 1496 aa14.13□□□□□ -0.15
Pcdhb6-201ENSMUST00000061717 Plppr3Q7TPB0 716 aa14.12□□□□□ -0.15
Pcdhb6-201ENSMUST00000061717 Cep162Q6ZQ06 1403 aa14.11□□□□□ -0.15
Pcdhb6-201ENSMUST00000061717 Ubl4bQ9CQ84 188 aa14.11□□□□□ -0.15
Pcdhb6-201ENSMUST00000061717 Npm1Q61937 292 aaKnown RBP14.1□□□□□ -0.15
Pcdhb6-201ENSMUST00000061717 Lmod2Q3UHZ5 550 aa14.06□□□□□ -0.16
Pcdhb6-201ENSMUST00000061717 Ercc6F8VPZ5 1481 aa14.04□□□□□ -0.16
Pcdhb6-201ENSMUST00000061717 Top2aQ01320 1528 aaKnown RBP14□□□□□ -0.17
Pcdhb6-201ENSMUST00000061717 Eid3Q3V124 375 aa14□□□□□ -0.17
Pcdhb6-201ENSMUST00000061717 Fam50aQ9WV03 339 aaKnown RBP13.99□□□□□ -0.17
Pcdhb6-201ENSMUST00000061717 Ttbk1Q6PCN3 1308 aa13.98□□□□□ -0.17
Pcdhb6-201ENSMUST00000061717 Frmpd1A2AKB4 1549 aa13.97□□□□□ -0.17
Pcdhb6-201ENSMUST00000061717 ClspnQ80YR7 1315 aa13.97□□□□□ -0.17
Pcdhb6-201ENSMUST00000061717 Ube2uB1AUC4 352 aa13.95□□□□□ -0.18
Pcdhb6-201ENSMUST00000061717 Setd5Q5XJV7 1441 aa13.93□□□□□ -0.18
Pcdhb6-201ENSMUST00000061717 Aebp2Q9Z248 504 aaKnown RBP13.92□□□□□ -0.18
Pcdhb6-201ENSMUST00000061717 PtprkP35822 1457 aa13.91□□□□□ -0.18
Pcdhb6-201ENSMUST00000061717 TonslQ6NZL6 1363 aa13.9□□□□□ -0.18
Pcdhb6-201ENSMUST00000061717 Ccdc18Q640L5 1455 aa13.87□□□□□ -0.19
Pcdhb6-201ENSMUST00000061717 Pelp1Q9DBD5 1123 aaKnown RBP13.85□□□□□ -0.19
Pcdhb6-201ENSMUST00000061717 Wdr62Q3U3T8 1523 aa13.85□□□□□ -0.19
Pcdhb6-201ENSMUST00000061717 Cux2P70298 1426 aa13.85□□□□□ -0.19
Pcdhb6-201ENSMUST00000061717 Eea1Q8BL66 1411 aa13.85□□□□□ -0.19
Pcdhb6-201ENSMUST00000061717 BlmO88700 1416 aa13.83□□□□□ -0.19
Pcdhb6-201ENSMUST00000061717 Tnnt3Q9QZ47 272 aa13.83□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms