RNA–Protein interactions for RNA: ENSMUST00000056781.4

Ccdc57-201, Transcript of Coiled-coil domain-containing protein 57, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc57, Length 3,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc57-201ENSMUST00000056781 Rpgrip1Q9EPQ2 1331 aa18.95■□□□□ 0.62
Ccdc57-201ENSMUST00000056781 Acin1Q9JIX8 1338 aaKnown RBP18.24■□□□□ 0.51
Ccdc57-201ENSMUST00000056781 Pcgf6Q99NA9 353 aa18.18■□□□□ 0.5
Ccdc57-201ENSMUST00000056781 Ehmt2Q9Z148 1263 aaKnown RBP18.06■□□□□ 0.48
Ccdc57-201ENSMUST00000056781 Rhox8Q6VSS7 320 aa18.05■□□□□ 0.48
Ccdc57-201ENSMUST00000056781 Ccdc180J3QNE4 1664 aa17.73■□□□□ 0.43
Ccdc57-201ENSMUST00000056781 Rtl1Q7M732 1744 aa17.67■□□□□ 0.42
Ccdc57-201ENSMUST00000056781 Las1lA2BE28 776 aaKnown RBP17.64■□□□□ 0.41
Ccdc57-201ENSMUST00000056781 NischQ80TM9 1593 aa17.64■□□□□ 0.41
Ccdc57-201ENSMUST00000056781 Supt5hO55201 1082 aaKnown RBP17.62■□□□□ 0.41
Ccdc57-201ENSMUST00000056781 Neurod1Q60867 357 aa17.6■□□□□ 0.41
Ccdc57-201ENSMUST00000056781 CenpbP27790 599 aa17.3■□□□□ 0.36
Ccdc57-201ENSMUST00000056781 Trim41Q5NCC3 630 aa17.3■□□□□ 0.36
Ccdc57-201ENSMUST00000056781 1700123L14RikQ3V2K7 440 aa17.25■□□□□ 0.35
Ccdc57-201ENSMUST00000056781 Myt1Q8CFC2 1127 aa17.2■□□□□ 0.34
Ccdc57-201ENSMUST00000056781 Dcaf1Q80TR8 1506 aa17.18■□□□□ 0.34
Ccdc57-201ENSMUST00000056781 Zeb1Q64318 1117 aa17.15■□□□□ 0.34
Ccdc57-201ENSMUST00000056781 DiexfQ8BTT6 772 aaKnown RBP17.14■□□□□ 0.33
Ccdc57-201ENSMUST00000056781 Csrnp3P59055 597 aa17.11■□□□□ 0.33
Ccdc57-201ENSMUST00000056781 Abcc9P70170 1546 aa17.03■□□□□ 0.32
Ccdc57-201ENSMUST00000056781 Cngb1E1AZ71 1325 aa16.99■□□□□ 0.31
Ccdc57-201ENSMUST00000056781 HrcG5E8J6 738 aa16.93■□□□□ 0.3
Ccdc57-201ENSMUST00000056781 Anks4bQ8K3X6 423 aa16.93■□□□□ 0.3
Ccdc57-201ENSMUST00000056781 Zcchc6Q5BLK4 1491 aaKnown RBP16.86■□□□□ 0.29
Ccdc57-201ENSMUST00000056781 Sall2Q9QX96 1004 aa16.82■□□□□ 0.28
Ccdc57-201ENSMUST00000056781 Bcl11aQ9QYE3 773 aa16.8■□□□□ 0.28
Ccdc57-201ENSMUST00000056781 Aplp2Q06335 707 aa16.77■□□□□ 0.28
Ccdc57-201ENSMUST00000056781 Gm38655A0A286YDK6 273 aa16.75■□□□□ 0.27
Ccdc57-201ENSMUST00000056781 NefmP08553 848 aa16.64■□□□□ 0.25
Ccdc57-201ENSMUST00000056781 Wdr66E9Q743 1299 aa16.62■□□□□ 0.25
Ccdc57-201ENSMUST00000056781 Cdk11bP24788 784 aaKnown RBP16.61■□□□□ 0.25
Ccdc57-201ENSMUST00000056781 Ccdc136Q3TVA9 1136 aa16.57■□□□□ 0.24
Ccdc57-201ENSMUST00000056781 Gm35339A0A140LHH9 1649 aa16.55■□□□□ 0.24
Ccdc57-201ENSMUST00000056781 Nop58Q6DFW4 536 aaKnown RBP16.53■□□□□ 0.24
Ccdc57-201ENSMUST00000056781 Mier1Q5UAK0 511 aa16.42■□□□□ 0.22
Ccdc57-201ENSMUST00000056781 PrkcshO08795 521 aa16.41■□□□□ 0.22
Ccdc57-201ENSMUST00000056781 Ppargc1bQ8VHJ7 1014 aa16.4■□□□□ 0.22
Ccdc57-201ENSMUST00000056781 Abcc8B2RUS7 1588 aa16.37■□□□□ 0.21
Ccdc57-201ENSMUST00000056781 Fam71e1A1L3C1 212 aa16.36■□□□□ 0.21
Ccdc57-201ENSMUST00000056781 Amer1Q7TS75 1132 aa16.3■□□□□ 0.2
Ccdc57-201ENSMUST00000056781 Aebp2Q9Z248 504 aaKnown RBP16.28■□□□□ 0.2
Ccdc57-201ENSMUST00000056781 Mapk8ip2Q9ERE9 830 aa16.26■□□□□ 0.19
Ccdc57-201ENSMUST00000056781 Ifnlr1Q8CGK5 535 aa16.23■□□□□ 0.19
Ccdc57-201ENSMUST00000056781 ClspnQ80YR7 1315 aa16.21■□□□□ 0.19
Ccdc57-201ENSMUST00000056781 Gab3Q8BSM5 595 aa16.18■□□□□ 0.18
Ccdc57-201ENSMUST00000056781 SafbD3YXK2 937 aaKnown RBP16.13■□□□□ 0.17
Ccdc57-201ENSMUST00000056781 Cep164Q5DU05 1446 aa16.1■□□□□ 0.17
Ccdc57-201ENSMUST00000056781 Hnrnpul2Q00PI9 745 aaKnown RBP16.02■□□□□ 0.15
Ccdc57-201ENSMUST00000056781 Tnnt3Q9QZ47 272 aa15.99■□□□□ 0.15
Ccdc57-201ENSMUST00000056781 UbtfP25976 765 aaKnown RBP15.96■□□□□ 0.15
Ccdc57-201ENSMUST00000056781 Pelp1Q9DBD5 1123 aaKnown RBP15.91■□□□□ 0.14
Ccdc57-201ENSMUST00000056781 Anp32aO35381 247 aa15.91■□□□□ 0.14
Ccdc57-201ENSMUST00000056781 Ttbk1Q6PCN3 1308 aa15.91■□□□□ 0.14
Ccdc57-201ENSMUST00000056781 Ap3b1Q9Z1T1 1105 aa15.86■□□□□ 0.13
Ccdc57-201ENSMUST00000056781 Rtl5Q5DTT4 599 aa15.85■□□□□ 0.13
Ccdc57-201ENSMUST00000056781 TonslQ6NZL6 1363 aa15.84■□□□□ 0.13
Ccdc57-201ENSMUST00000056781 Chic1Q8CBW7 227 aa15.75■□□□□ 0.11
Ccdc57-201ENSMUST00000056781 Hdac5Q9Z2V6 1113 aa15.75■□□□□ 0.11
Ccdc57-201ENSMUST00000056781 Nolc1E9Q5C9 702 aaKnown RBP15.63■□□□□ 0.09
Ccdc57-201ENSMUST00000056781 Rsf1E9PWW9 1441 aaKnown RBP15.6■□□□□ 0.09
Ccdc57-201ENSMUST00000056781 Calr4Q3TQS0 420 aa15.56■□□□□ 0.08
Ccdc57-201ENSMUST00000056781 Supt16hQ920B9 1047 aa15.55■□□□□ 0.08
Ccdc57-201ENSMUST00000056781 Rb1cc1Q9ESK9 1588 aa15.54■□□□□ 0.08
Ccdc57-201ENSMUST00000056781 Stra8P70278 393 aa15.54■□□□□ 0.08
Ccdc57-201ENSMUST00000056781 Pknox2Q8BG99 474 aa15.49■□□□□ 0.07
Ccdc57-201ENSMUST00000056781 Gtf3c3Q3TMP1 882 aa15.46■□□□□ 0.07
Ccdc57-201ENSMUST00000056781 Il27Q8K3I6 234 aa15.46■□□□□ 0.06
Ccdc57-201ENSMUST00000056781 Upf2A2AT37 1269 aaKnown RBP15.45■□□□□ 0.06
Ccdc57-201ENSMUST00000056781 Fgd1P52734 960 aa15.44■□□□□ 0.06
Ccdc57-201ENSMUST00000056781 Plcd4Q8K3R3 807 aa15.44■□□□□ 0.06
Ccdc57-201ENSMUST00000056781 Ppp4r2Q0VGB7 417 aa15.43■□□□□ 0.06
Ccdc57-201ENSMUST00000056781 Znf710Q3U288 666 aa15.43■□□□□ 0.06
Ccdc57-201ENSMUST00000056781 Slc24a1Q91WD8 1130 aa15.41■□□□□ 0.06
Ccdc57-201ENSMUST00000056781 NrdcQ8BHG1 1161 aa15.39■□□□□ 0.05
Ccdc57-201ENSMUST00000056781 Eid3Q3V124 375 aa15.38■□□□□ 0.05
Ccdc57-201ENSMUST00000056781 Ccdc27Q3V036 639 aa15.37■□□□□ 0.05
Ccdc57-201ENSMUST00000056781 Irx3P81067 507 aa15.36■□□□□ 0.05
Ccdc57-201ENSMUST00000056781 Myt1lP97500 1187 aa15.36■□□□□ 0.05
Ccdc57-201ENSMUST00000056781 Wdr43Q6ZQL4 677 aaKnown RBP15.35■□□□□ 0.05
Ccdc57-201ENSMUST00000056781 Ccdc88bQ4QRL3 1481 aa15.35■□□□□ 0.05
Ccdc57-201ENSMUST00000056781 Baz1aO88379 1555 aa15.3■□□□□ 0.04
Ccdc57-201ENSMUST00000056781 Eif5bQ05D44 1216 aaKnown RBP15.3■□□□□ 0.04
Ccdc57-201ENSMUST00000056781 4933416C03RikQ3V063 378 aa15.29■□□□□ 0.04
Ccdc57-201ENSMUST00000056781 Ccdc9Q8VC31 543 aaKnown RBP15.27■□□□□ 0.03
Ccdc57-201ENSMUST00000056781 Pak3Q61036 559 aa15.26■□□□□ 0.03
Ccdc57-201ENSMUST00000056781 Plekhg3Q4VAC9 1341 aa15.25■□□□□ 0.03
Ccdc57-201ENSMUST00000056781 Hsp90aa1P07901 733 aaKnown RBP15.23■□□□□ 0.03
Ccdc57-201ENSMUST00000056781 ScribQ80U72 1612 aa15.22■□□□□ 0.03
Ccdc57-201ENSMUST00000056781 NclP09405 707 aaKnown RBP15.2■□□□□ 0.02
Ccdc57-201ENSMUST00000056781 DaxxO35613 739 aa15.15■□□□□ 0.02
Ccdc57-201ENSMUST00000056781 Rpap1Q80TE0 1409 aa15.14■□□□□ 0.01
Ccdc57-201ENSMUST00000056781 Esf1Q3V1V3 845 aaKnown RBP15.12■□□□□ 0.01
Ccdc57-201ENSMUST00000056781 Ipo4Q8VI75 1082 aa15.11■□□□□ 0.01
Ccdc57-201ENSMUST00000056781 Washc2Q6PGL7 1334 aa15.07■□□□□ 0
Ccdc57-201ENSMUST00000056781 Slc4a3P16283 1227 aa15.07■□□□□ 0
Ccdc57-201ENSMUST00000056781 Golga3P55937 1487 aa15.06■□□□□ 0
Ccdc57-201ENSMUST00000056781 P3h3Q8CG70 732 aa15.05■□□□□ 0
Ccdc57-201ENSMUST00000056781 Ccer2J3QPU5 274 aa15.05■□□□□ -0
Ccdc57-201ENSMUST00000056781 Liat1Q810M6 228 aa15.05■□□□□ -0
Ccdc57-201ENSMUST00000056781 Ipo9Q91YE6 1041 aa15.03■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms