RNA–Protein interactions for RNA: ENSMUST00000056145.2

Gm5546-201, mousemouse

TSL 1 (best) BASIC

Gene Gm5546, Length 2,777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5546-201ENSMUST00000056145 Chic1Q8CBW7 227 aa16.94■□□□□ 0.3
Gm5546-201ENSMUST00000056145 Plppr3Q7TPB0 716 aa15.73■□□□□ 0.11
Gm5546-201ENSMUST00000056145 Phf23Q8BSN5 401 aa15.71■□□□□ 0.11
Gm5546-201ENSMUST00000056145 Mapk8ip2Q9ERE9 830 aa15.68■□□□□ 0.1
Gm5546-201ENSMUST00000056145 Kcna4Q61423 654 aa15.36■□□□□ 0.05
Gm5546-201ENSMUST00000056145 Gab3Q8BSM5 595 aa15.08■□□□□ 0
Gm5546-201ENSMUST00000056145 Senp3Q9EP97 568 aaKnown RBP14.65□□□□□ -0.06
Gm5546-201ENSMUST00000056145 Ube2uB1AUC4 352 aa14.56□□□□□ -0.08
Gm5546-201ENSMUST00000056145 Ppargc1bQ8VHJ7 1014 aa14.5□□□□□ -0.09
Gm5546-201ENSMUST00000056145 Dmrt2Q8BG36 561 aa13.63□□□□□ -0.23
Gm5546-201ENSMUST00000056145 Ehmt2Q9Z148 1263 aaKnown RBP13.52□□□□□ -0.24
Gm5546-201ENSMUST00000056145 Slc4a1apE9PX68 744 aa13.36□□□□□ -0.27
Gm5546-201ENSMUST00000056145 Fam71e1A1L3C1 212 aa13.26□□□□□ -0.29
Gm5546-201ENSMUST00000056145 Gm35339A0A140LHH9 1649 aa13.12□□□□□ -0.31
Gm5546-201ENSMUST00000056145 Atf5O70191 283 aa12.87□□□□□ -0.35
Gm5546-201ENSMUST00000056145 Trap1aP19473 224 aa12.8□□□□□ -0.36
Gm5546-201ENSMUST00000056145 Pde4cQ3UEI1 686 aa12.69□□□□□ -0.38
Gm5546-201ENSMUST00000056145 AcrbpQ3V140 540 aa12.62□□□□□ -0.39
Gm5546-201ENSMUST00000056145 1700123L14RikQ3V2K7 440 aa12.58□□□□□ -0.4
Gm5546-201ENSMUST00000056145 Tshz2Q68FE9 1030 aa12.55□□□□□ -0.4
Gm5546-201ENSMUST00000056145 Nlrp6Q91WS2 869 aa12.55□□□□□ -0.4
Gm5546-201ENSMUST00000056145 Prdm10Q3UTQ7 1184 aa12.51□□□□□ -0.41
Gm5546-201ENSMUST00000056145 Hoxd11P23813 323 aa12.44□□□□□ -0.42
Gm5546-201ENSMUST00000056145 Ppp4r2Q0VGB7 417 aa12.39□□□□□ -0.43
Gm5546-201ENSMUST00000056145 Cdca7Q9D0M2 382 aa12.39□□□□□ -0.43
Gm5546-201ENSMUST00000056145 NischQ80TM9 1593 aa12.35□□□□□ -0.43
Gm5546-201ENSMUST00000056145 Ecm2Q5FW85 670 aa12.32□□□□□ -0.44
Gm5546-201ENSMUST00000056145 Rtn4Q99P72 1162 aaKnown RBP12.3□□□□□ -0.44
Gm5546-201ENSMUST00000056145 Hs6st3Q9QYK4 470 aa12.22□□□□□ -0.45
Gm5546-201ENSMUST00000056145 Prdm16A2A935 1275 aa12.18□□□□□ -0.46
Gm5546-201ENSMUST00000056145 Abcc9P70170 1546 aa12.18□□□□□ -0.46
Gm5546-201ENSMUST00000056145 Abcc8B2RUS7 1588 aa12.17□□□□□ -0.46
Gm5546-201ENSMUST00000056145 Npm2Q80W85 207 aa12.16□□□□□ -0.46
Gm5546-201ENSMUST00000056145 Arid3aQ62431 601 aa12.13□□□□□ -0.47
Gm5546-201ENSMUST00000056145 Prm3Q62100 101 aa12.1□□□□□ -0.47
Gm5546-201ENSMUST00000056145 ScribQ80U72 1612 aa12.07□□□□□ -0.48
Gm5546-201ENSMUST00000056145 Chrna2Q91X60 512 aa11.97□□□□□ -0.49
Gm5546-201ENSMUST00000056145 Taok2Q6ZQ29 1240 aa11.96□□□□□ -0.49
Gm5546-201ENSMUST00000056145 Dnajc5bQ9CQ94 199 aa11.96□□□□□ -0.49
Gm5546-201ENSMUST00000056145 Styxl1Q9DAR2 321 aa11.87□□□□□ -0.51
Gm5546-201ENSMUST00000056145 Rsph4aQ8BYM7 716 aa11.82□□□□□ -0.52
Gm5546-201ENSMUST00000056145 Riok3Q9DBU3 519 aaKnown RBP11.79□□□□□ -0.52
Gm5546-201ENSMUST00000056145 Bach1P97302 739 aa11.78□□□□□ -0.52
Gm5546-201ENSMUST00000056145 DiexfQ8BTT6 772 aaKnown RBP11.77□□□□□ -0.53
Gm5546-201ENSMUST00000056145 Rimbp2Q80U40 1072 aa11.74□□□□□ -0.53
Gm5546-201ENSMUST00000056145 MyclP10166 368 aa11.73□□□□□ -0.53
Gm5546-201ENSMUST00000056145 Ms4a5Q810P8 197 aa11.67□□□□□ -0.54
Gm5546-201ENSMUST00000056145 Znf219Q6IQX8 726 aa11.66□□□□□ -0.54
Gm5546-201ENSMUST00000056145 NacadQ5SWP3 1504 aa11.63□□□□□ -0.55
Gm5546-201ENSMUST00000056145 C1qtnf12Q8R2Z0 308 aa11.62□□□□□ -0.55
Gm5546-201ENSMUST00000056145 Kdm5dQ62240 1548 aa11.48□□□□□ -0.57
Gm5546-201ENSMUST00000056145 CatipB9EKE5 520 aa11.47□□□□□ -0.57
Gm5546-201ENSMUST00000056145 WdpcpQ8C456 722 aa11.46□□□□□ -0.57
Gm5546-201ENSMUST00000056145 Sycp2Q9CUU3 1500 aa11.42□□□□□ -0.58
Gm5546-201ENSMUST00000056145 Skap1Q3UUV5 355 aa11.41□□□□□ -0.58
Gm5546-201ENSMUST00000056145 Tcf3P15806 651 aa11.4□□□□□ -0.58
Gm5546-201ENSMUST00000056145 ArxO35085 564 aa11.39□□□□□ -0.59
Gm5546-201ENSMUST00000056145 Esf1Q3V1V3 845 aaKnown RBP11.38□□□□□ -0.59
Gm5546-201ENSMUST00000056145 Rhox8Q6VSS7 320 aa11.35□□□□□ -0.59
Gm5546-201ENSMUST00000056145 Thoc2B1AZI6 1594 aaKnown RBP11.35□□□□□ -0.59
Gm5546-201ENSMUST00000056145 Ppp6r1Q7TSI3 856 aa11.34□□□□□ -0.59
Gm5546-201ENSMUST00000056145 BicraF8VPZ9 1578 aa11.33□□□□□ -0.6
Gm5546-201ENSMUST00000056145 Dcaf1Q80TR8 1506 aa11.29□□□□□ -0.6
Gm5546-201ENSMUST00000056145 Ttbk1Q6PCN3 1308 aa11.25□□□□□ -0.61
Gm5546-201ENSMUST00000056145 Vsig10D3YX43 558 aa11.22□□□□□ -0.61
Gm5546-201ENSMUST00000056145 ArsiQ32KI9 573 aa11.22□□□□□ -0.61
Gm5546-201ENSMUST00000056145 Fam163aQ8CAA5 168 aa11.21□□□□□ -0.61
Gm5546-201ENSMUST00000056145 Mkrn3Q60764 544 aa11.16□□□□□ -0.62
Gm5546-201ENSMUST00000056145 Trim41Q5NCC3 630 aa11.15□□□□□ -0.63
Gm5546-201ENSMUST00000056145 Baz1bQ9Z277 1479 aa11.13□□□□□ -0.63
Gm5546-201ENSMUST00000056145 Pds5bQ4VA53 1446 aaKnown RBP11.13□□□□□ -0.63
Gm5546-201ENSMUST00000056145 Zbtb22Q9Z0G7 638 aa11.11□□□□□ -0.63
Gm5546-201ENSMUST00000056145 UbtfP25976 765 aaKnown RBP11.11□□□□□ -0.63
Gm5546-201ENSMUST00000056145 Dnajc5P60904 198 aa11.1□□□□□ -0.63
Gm5546-201ENSMUST00000056145 Ppp1r37Q8BKR5 712 aa11.1□□□□□ -0.63
Gm5546-201ENSMUST00000056145 Amer1Q7TS75 1132 aa11.05□□□□□ -0.64
Gm5546-201ENSMUST00000056145 Stag3O70576 1240 aa11.03□□□□□ -0.64
Gm5546-201ENSMUST00000056145 MpndQ3TV65 487 aa11.03□□□□□ -0.64
Gm5546-201ENSMUST00000056145 Slc34a2Q9DBP0 697 aa11.01□□□□□ -0.65
Gm5546-201ENSMUST00000056145 Zbtb38Q3LR78 1197 aa11□□□□□ -0.65
Gm5546-201ENSMUST00000056145 Sox12Q04890 314 aa10.99□□□□□ -0.65
Gm5546-201ENSMUST00000056145 Akt1s1Q9D1F4 257 aa10.99□□□□□ -0.65
Gm5546-201ENSMUST00000056145 Fam135aQ6NS59 1506 aa10.98□□□□□ -0.65
Gm5546-201ENSMUST00000056145 Cc2d2aQ8CFW7 1633 aa10.97□□□□□ -0.65
Gm5546-201ENSMUST00000056145 Slc4a2P13808 1237 aaKnown RBP10.97□□□□□ -0.65
Gm5546-201ENSMUST00000056145 G430095P16RikE9Q913 147 aa10.92□□□□□ -0.66
Gm5546-201ENSMUST00000056145 Atad2bE9Q166 1460 aaKnown RBP10.91□□□□□ -0.66
Gm5546-201ENSMUST00000056145 Myt1Q8CFC2 1127 aa10.91□□□□□ -0.66
Gm5546-201ENSMUST00000056145 Ccdc180J3QNE4 1664 aa10.88□□□□□ -0.67
Gm5546-201ENSMUST00000056145 Skida1Q80YR3 822 aa10.87□□□□□ -0.67
Gm5546-201ENSMUST00000056145 Npm3Q9CPP0 175 aaKnown RBP10.87□□□□□ -0.67
Gm5546-201ENSMUST00000056145 Bcl11aQ9QYE3 773 aa10.84□□□□□ -0.67
Gm5546-201ENSMUST00000056145 Ercc6F8VPZ5 1481 aa10.82□□□□□ -0.68
Gm5546-201ENSMUST00000056145 Crybg2B7ZCC2 1516 aa10.82□□□□□ -0.68
Gm5546-201ENSMUST00000056145 Noa1Q9JJG9 693 aaKnown RBP10.82□□□□□ -0.68
Gm5546-201ENSMUST00000056145 Spock2Q9ER58 423 aa10.81□□□□□ -0.68
Gm5546-201ENSMUST00000056145 Zeb1Q64318 1117 aa10.8□□□□□ -0.68
Gm5546-201ENSMUST00000056145 Fbln2P37889 1221 aa10.79□□□□□ -0.68
Gm5546-201ENSMUST00000056145 Ripply1Q2WG77 201 aa10.79□□□□□ -0.68
Gm5546-201ENSMUST00000056145 Rb1cc1Q9ESK9 1588 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms