RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 Rhox8Q6VSS7 320 aa20.26■□□□□ 0.83
Pcdhb17-201ENSMUST00000053856 NischQ80TM9 1593 aa18.56■□□□□ 0.56
Pcdhb17-201ENSMUST00000053856 Rpgrip1Q9EPQ2 1331 aa18.32■□□□□ 0.52
Pcdhb17-201ENSMUST00000053856 Esf1Q3V1V3 845 aaKnown RBP18.22■□□□□ 0.51
Pcdhb17-201ENSMUST00000053856 Trim41Q5NCC3 630 aa18.16■□□□□ 0.5
Pcdhb17-201ENSMUST00000053856 Ccdc136Q3TVA9 1136 aa17.89■□□□□ 0.46
Pcdhb17-201ENSMUST00000053856 Cngb1E1AZ71 1325 aa17.86■□□□□ 0.45
Pcdhb17-201ENSMUST00000053856 Zeb1Q64318 1117 aa17.74■□□□□ 0.43
Pcdhb17-201ENSMUST00000053856 Ehmt2Q9Z148 1263 aaKnown RBP17.71■□□□□ 0.43
Pcdhb17-201ENSMUST00000053856 Npm2Q80W85 207 aa17.63■□□□□ 0.41
Pcdhb17-201ENSMUST00000053856 Las1lA2BE28 776 aaKnown RBP17.53■□□□□ 0.4
Pcdhb17-201ENSMUST00000053856 Abcc9P70170 1546 aa17.36■□□□□ 0.37
Pcdhb17-201ENSMUST00000053856 Ube2uB1AUC4 352 aa17.36■□□□□ 0.37
Pcdhb17-201ENSMUST00000053856 Gab3Q8BSM5 595 aa17.27■□□□□ 0.36
Pcdhb17-201ENSMUST00000053856 Wdr66E9Q743 1299 aa17.2■□□□□ 0.34
Pcdhb17-201ENSMUST00000053856 Myt1lP97500 1187 aa17.18■□□□□ 0.34
Pcdhb17-201ENSMUST00000053856 Zcchc6Q5BLK4 1491 aaKnown RBP17.12■□□□□ 0.33
Pcdhb17-201ENSMUST00000053856 HrcG5E8J6 738 aa17.07■□□□□ 0.32
Pcdhb17-201ENSMUST00000053856 Abcc8B2RUS7 1588 aa17.06■□□□□ 0.32
Pcdhb17-201ENSMUST00000053856 Rtl1Q7M732 1744 aa16.99■□□□□ 0.31
Pcdhb17-201ENSMUST00000053856 Ccdc180J3QNE4 1664 aa16.98■□□□□ 0.31
Pcdhb17-201ENSMUST00000053856 Pelp1Q9DBD5 1123 aaKnown RBP16.96■□□□□ 0.31
Pcdhb17-201ENSMUST00000053856 Il27Q8K3I6 234 aa16.96■□□□□ 0.31
Pcdhb17-201ENSMUST00000053856 Acin1Q9JIX8 1338 aaKnown RBP16.94■□□□□ 0.3
Pcdhb17-201ENSMUST00000053856 Gm35339A0A140LHH9 1649 aa16.88■□□□□ 0.29
Pcdhb17-201ENSMUST00000053856 Npm1Q61937 292 aaKnown RBP16.82■□□□□ 0.28
Pcdhb17-201ENSMUST00000053856 NefmP08553 848 aa16.79■□□□□ 0.28
Pcdhb17-201ENSMUST00000053856 CenpbP27790 599 aa16.71■□□□□ 0.27
Pcdhb17-201ENSMUST00000053856 Stra8P70278 393 aa16.61■□□□□ 0.25
Pcdhb17-201ENSMUST00000053856 Brd4Q9ESU6 1400 aaKnown RBP16.61■□□□□ 0.25
Pcdhb17-201ENSMUST00000053856 UbtfP25976 765 aaKnown RBP16.56■□□□□ 0.24
Pcdhb17-201ENSMUST00000053856 NacadQ5SWP3 1504 aa16.49■□□□□ 0.23
Pcdhb17-201ENSMUST00000053856 Anp32bQ9EST5 272 aaKnown RBP16.48■□□□□ 0.23
Pcdhb17-201ENSMUST00000053856 NclP09405 707 aaKnown RBP16.46■□□□□ 0.23
Pcdhb17-201ENSMUST00000053856 Pcgf6Q99NA9 353 aa16.46■□□□□ 0.23
Pcdhb17-201ENSMUST00000053856 Hdac5Q9Z2V6 1113 aa16.45■□□□□ 0.22
Pcdhb17-201ENSMUST00000053856 Ubl4bQ9CQ84 188 aa16.35■□□□□ 0.21
Pcdhb17-201ENSMUST00000053856 Cdk11bP24788 784 aaKnown RBP16.32■□□□□ 0.2
Pcdhb17-201ENSMUST00000053856 Fam50aQ9WV03 339 aaKnown RBP16.31■□□□□ 0.2
Pcdhb17-201ENSMUST00000053856 Rb1cc1Q9ESK9 1588 aa16.3■□□□□ 0.2
Pcdhb17-201ENSMUST00000053856 Amer1Q7TS75 1132 aa16.29■□□□□ 0.2
Pcdhb17-201ENSMUST00000053856 Os9Q8K2C7 672 aa16.25■□□□□ 0.19
Pcdhb17-201ENSMUST00000053856 Myt1Q8CFC2 1127 aa16.24■□□□□ 0.19
Pcdhb17-201ENSMUST00000053856 Ap3b1Q9Z1T1 1105 aa16.22■□□□□ 0.19
Pcdhb17-201ENSMUST00000053856 Slc24a1Q91WD8 1130 aa16.19■□□□□ 0.18
Pcdhb17-201ENSMUST00000053856 Ercc6F8VPZ5 1481 aa16.16■□□□□ 0.18
Pcdhb17-201ENSMUST00000053856 Nop58Q6DFW4 536 aaKnown RBP16.13■□□□□ 0.17
Pcdhb17-201ENSMUST00000053856 Gm13697A2AK42 830 aa16.12■□□□□ 0.17
Pcdhb17-201ENSMUST00000053856 Dcaf1Q80TR8 1506 aa16.11■□□□□ 0.17
Pcdhb17-201ENSMUST00000053856 Supt5hO55201 1082 aaKnown RBP16.09■□□□□ 0.17
Pcdhb17-201ENSMUST00000053856 NrdcQ8BHG1 1161 aa16.09■□□□□ 0.17
Pcdhb17-201ENSMUST00000053856 Tnnt3Q9QZ47 272 aa16.07■□□□□ 0.16
Pcdhb17-201ENSMUST00000053856 Rsf1E9PWW9 1441 aaKnown RBP16.06■□□□□ 0.16
Pcdhb17-201ENSMUST00000053856 Ccer2J3QPU5 274 aa16.04■□□□□ 0.16
Pcdhb17-201ENSMUST00000053856 Baz1aO88379 1555 aa16.03■□□□□ 0.16
Pcdhb17-201ENSMUST00000053856 Ttbk1Q6PCN3 1308 aa16.01■□□□□ 0.15
Pcdhb17-201ENSMUST00000053856 Pds5bQ4VA53 1446 aaKnown RBP16■□□□□ 0.15
Pcdhb17-201ENSMUST00000053856 Clstn2Q9ER65 966 aa15.95■□□□□ 0.14
Pcdhb17-201ENSMUST00000053856 Cep164Q5DU05 1446 aa15.94■□□□□ 0.14
Pcdhb17-201ENSMUST00000053856 Hnrnpul2Q00PI9 745 aaKnown RBP15.94■□□□□ 0.14
Pcdhb17-201ENSMUST00000053856 Neurod1Q60867 357 aa15.93■□□□□ 0.14
Pcdhb17-201ENSMUST00000053856 Lmod2Q3UHZ5 550 aa15.92■□□□□ 0.14
Pcdhb17-201ENSMUST00000053856 Ccdc18Q640L5 1455 aa15.92■□□□□ 0.14
Pcdhb17-201ENSMUST00000053856 Ppargc1bQ8VHJ7 1014 aa15.91■□□□□ 0.14
Pcdhb17-201ENSMUST00000053856 TonslQ6NZL6 1363 aa15.9■□□□□ 0.14
Pcdhb17-201ENSMUST00000053856 Clip1Q922J3 1391 aa15.88■□□□□ 0.13
Pcdhb17-201ENSMUST00000053856 Kif15Q6P9L6 1387 aa15.87■□□□□ 0.13
Pcdhb17-201ENSMUST00000053856 Ifnlr1Q8CGK5 535 aa15.87■□□□□ 0.13
Pcdhb17-201ENSMUST00000053856 NeflP08551 543 aa15.85■□□□□ 0.13
Pcdhb17-201ENSMUST00000053856 4933416C03RikQ3V063 378 aa15.8■□□□□ 0.12
Pcdhb17-201ENSMUST00000053856 Mier1Q5UAK0 511 aa15.8■□□□□ 0.12
Pcdhb17-201ENSMUST00000053856 Gm13695A2AK44 830 aa15.8■□□□□ 0.12
Pcdhb17-201ENSMUST00000053856 Kdm5dQ62240 1548 aa15.79■□□□□ 0.12
Pcdhb17-201ENSMUST00000053856 Golga3P55937 1487 aa15.77■□□□□ 0.12
Pcdhb17-201ENSMUST00000053856 Fkbp15Q6P9Q6 1216 aaKnown RBP15.77■□□□□ 0.11
Pcdhb17-201ENSMUST00000053856 Eif5bQ05D44 1216 aaKnown RBP15.75■□□□□ 0.11
Pcdhb17-201ENSMUST00000053856 Plekhg3Q4VAC9 1341 aa15.75■□□□□ 0.11
Pcdhb17-201ENSMUST00000053856 Rtl5Q5DTT4 599 aa15.71■□□□□ 0.11
Pcdhb17-201ENSMUST00000053856 Atp1b4Q99ME6 356 aa15.71■□□□□ 0.11
Pcdhb17-201ENSMUST00000053856 Crybg2B7ZCC2 1516 aa15.7■□□□□ 0.1
Pcdhb17-201ENSMUST00000053856 Zbtb7cQ8VCZ7 619 aa15.69■□□□□ 0.1
Pcdhb17-201ENSMUST00000053856 Safb2Q80YR5 991 aaKnown RBP15.69■□□□□ 0.1
Pcdhb17-201ENSMUST00000053856 Erich6D3Z6S9 713 aa15.68■□□□□ 0.1
Pcdhb17-201ENSMUST00000053856 ClspnQ80YR7 1315 aa15.65■□□□□ 0.1
Pcdhb17-201ENSMUST00000053856 4930567H17RikQ3V0K5 233 aa15.64■□□□□ 0.09
Pcdhb17-201ENSMUST00000053856 Chic1Q8CBW7 227 aa15.62■□□□□ 0.09
Pcdhb17-201ENSMUST00000053856 Sycp2Q9CUU3 1500 aa15.6■□□□□ 0.09
Pcdhb17-201ENSMUST00000053856 Setd5Q5XJV7 1441 aa15.6■□□□□ 0.09
Pcdhb17-201ENSMUST00000053856 BlmO88700 1416 aa15.57■□□□□ 0.08
Pcdhb17-201ENSMUST00000053856 Nlrp6Q91WS2 869 aa15.53■□□□□ 0.08
Pcdhb17-201ENSMUST00000053856 Anp32aO35381 247 aa15.52■□□□□ 0.08
Pcdhb17-201ENSMUST00000053856 Phldb1Q6PDH0 1371 aaKnown RBP15.51■□□□□ 0.07
Pcdhb17-201ENSMUST00000053856 Eea1Q8BL66 1411 aa15.5■□□□□ 0.07
Pcdhb17-201ENSMUST00000053856 DiexfQ8BTT6 772 aaKnown RBP15.49■□□□□ 0.07
Pcdhb17-201ENSMUST00000053856 Anks4bQ8K3X6 423 aa15.49■□□□□ 0.07
Pcdhb17-201ENSMUST00000053856 Atad2bE9Q166 1460 aaKnown RBP15.48■□□□□ 0.07
Pcdhb17-201ENSMUST00000053856 Sall2Q9QX96 1004 aa15.48■□□□□ 0.07
Pcdhb17-201ENSMUST00000053856 Arhgap27A2AB59 869 aa15.47■□□□□ 0.07
Pcdhb17-201ENSMUST00000053856 Zfp777B9EKF4 885 aa15.44■□□□□ 0.06
Pcdhb17-201ENSMUST00000053856 Rsph4aQ8BYM7 716 aa15.43■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms