RNA–Protein interactions for RNA: ENSMUST00000031456.7

Pde6b-201, Transcript of Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pde6b, Length 2,799 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6b-201ENSMUST00000031456 Rpgrip1Q9EPQ2 1331 aa18.91■□□□□ 0.62
Pde6b-201ENSMUST00000031456 Pcgf6Q99NA9 353 aa18.56■□□□□ 0.56
Pde6b-201ENSMUST00000031456 DiexfQ8BTT6 772 aaKnown RBP18.23■□□□□ 0.51
Pde6b-201ENSMUST00000031456 Myt1Q8CFC2 1127 aa18■□□□□ 0.47
Pde6b-201ENSMUST00000031456 CenpbP27790 599 aa17.94■□□□□ 0.46
Pde6b-201ENSMUST00000031456 Acin1Q9JIX8 1338 aaKnown RBP17.94■□□□□ 0.46
Pde6b-201ENSMUST00000031456 Las1lA2BE28 776 aaKnown RBP17.87■□□□□ 0.45
Pde6b-201ENSMUST00000031456 Bcl11aQ9QYE3 773 aa17.76■□□□□ 0.43
Pde6b-201ENSMUST00000031456 Neurod1Q60867 357 aa17.74■□□□□ 0.43
Pde6b-201ENSMUST00000031456 1700123L14RikQ3V2K7 440 aa17.62■□□□□ 0.41
Pde6b-201ENSMUST00000031456 Amer1Q7TS75 1132 aa17.43■□□□□ 0.38
Pde6b-201ENSMUST00000031456 PrkcshO08795 521 aa17.41■□□□□ 0.38
Pde6b-201ENSMUST00000031456 Supt5hO55201 1082 aaKnown RBP17.4■□□□□ 0.38
Pde6b-201ENSMUST00000031456 Trim41Q5NCC3 630 aa17.26■□□□□ 0.35
Pde6b-201ENSMUST00000031456 Csrnp3P59055 597 aa17.21■□□□□ 0.35
Pde6b-201ENSMUST00000031456 Rhox8Q6VSS7 320 aa17.21■□□□□ 0.35
Pde6b-201ENSMUST00000031456 Ehmt2Q9Z148 1263 aaKnown RBP17.12■□□□□ 0.33
Pde6b-201ENSMUST00000031456 Aplp2Q06335 707 aa17■□□□□ 0.31
Pde6b-201ENSMUST00000031456 Anks4bQ8K3X6 423 aa16.98■□□□□ 0.31
Pde6b-201ENSMUST00000031456 Ccdc180J3QNE4 1664 aa16.89■□□□□ 0.29
Pde6b-201ENSMUST00000031456 Ifnlr1Q8CGK5 535 aa16.86■□□□□ 0.29
Pde6b-201ENSMUST00000031456 Rtl1Q7M732 1744 aa16.86■□□□□ 0.29
Pde6b-201ENSMUST00000031456 Gm38655A0A286YDK6 273 aa16.67■□□□□ 0.26
Pde6b-201ENSMUST00000031456 Cngb1E1AZ71 1325 aa16.64■□□□□ 0.25
Pde6b-201ENSMUST00000031456 Dcaf1Q80TR8 1506 aa16.63■□□□□ 0.25
Pde6b-201ENSMUST00000031456 Fam71e1A1L3C1 212 aa16.52■□□□□ 0.23
Pde6b-201ENSMUST00000031456 Pknox2Q8BG99 474 aa16.51■□□□□ 0.23
Pde6b-201ENSMUST00000031456 Zeb1Q64318 1117 aa16.43■□□□□ 0.22
Pde6b-201ENSMUST00000031456 Sall2Q9QX96 1004 aa16.43■□□□□ 0.22
Pde6b-201ENSMUST00000031456 Fgd1P52734 960 aa16.4■□□□□ 0.22
Pde6b-201ENSMUST00000031456 Hdac5Q9Z2V6 1113 aa16.39■□□□□ 0.21
Pde6b-201ENSMUST00000031456 NischQ80TM9 1593 aa16.34■□□□□ 0.21
Pde6b-201ENSMUST00000031456 Plppr3Q7TPB0 716 aa16.32■□□□□ 0.2
Pde6b-201ENSMUST00000031456 Gm35339A0A140LHH9 1649 aa16.32■□□□□ 0.2
Pde6b-201ENSMUST00000031456 NrdcQ8BHG1 1161 aa16.3■□□□□ 0.2
Pde6b-201ENSMUST00000031456 Cdk11bP24788 784 aaKnown RBP16.23■□□□□ 0.19
Pde6b-201ENSMUST00000031456 CatipB9EKE5 520 aa16.17■□□□□ 0.18
Pde6b-201ENSMUST00000031456 Mapk8ip2Q9ERE9 830 aa16.15■□□□□ 0.18
Pde6b-201ENSMUST00000031456 Nop58Q6DFW4 536 aaKnown RBP16.11■□□□□ 0.17
Pde6b-201ENSMUST00000031456 Rtl5Q5DTT4 599 aa16■□□□□ 0.15
Pde6b-201ENSMUST00000031456 Plcd4Q8K3R3 807 aa15.99■□□□□ 0.15
Pde6b-201ENSMUST00000031456 SafbD3YXK2 937 aaKnown RBP15.96■□□□□ 0.15
Pde6b-201ENSMUST00000031456 Gtf3c3Q3TMP1 882 aa15.96■□□□□ 0.15
Pde6b-201ENSMUST00000031456 Gtf3c5Q8R2T8 520 aa15.95■□□□□ 0.14
Pde6b-201ENSMUST00000031456 NefmP08553 848 aa15.92■□□□□ 0.14
Pde6b-201ENSMUST00000031456 Ttbk1Q6PCN3 1308 aa15.91■□□□□ 0.14
Pde6b-201ENSMUST00000031456 Il27Q8K3I6 234 aa15.86■□□□□ 0.13
Pde6b-201ENSMUST00000031456 Zcchc6Q5BLK4 1491 aaKnown RBP15.85■□□□□ 0.13
Pde6b-201ENSMUST00000031456 Wdr66E9Q743 1299 aa15.81■□□□□ 0.12
Pde6b-201ENSMUST00000031456 BccipQ9CWI3 316 aa15.81■□□□□ 0.12
Pde6b-201ENSMUST00000031456 Pelp1Q9DBD5 1123 aaKnown RBP15.81■□□□□ 0.12
Pde6b-201ENSMUST00000031456 HrcG5E8J6 738 aa15.79■□□□□ 0.12
Pde6b-201ENSMUST00000031456 Aebp2Q9Z248 504 aaKnown RBP15.79■□□□□ 0.12
Pde6b-201ENSMUST00000031456 Anp32aO35381 247 aa15.78■□□□□ 0.12
Pde6b-201ENSMUST00000031456 Hnrnpul2Q00PI9 745 aaKnown RBP15.78■□□□□ 0.12
Pde6b-201ENSMUST00000031456 Zfp777B9EKF4 885 aa15.77■□□□□ 0.11
Pde6b-201ENSMUST00000031456 Abcc9P70170 1546 aa15.75■□□□□ 0.11
Pde6b-201ENSMUST00000031456 Abcc8B2RUS7 1588 aa15.74■□□□□ 0.11
Pde6b-201ENSMUST00000031456 Upf2A2AT37 1269 aaKnown RBP15.71■□□□□ 0.11
Pde6b-201ENSMUST00000031456 Irx3P81067 507 aa15.71■□□□□ 0.11
Pde6b-201ENSMUST00000031456 Ipo4Q8VI75 1082 aa15.69■□□□□ 0.1
Pde6b-201ENSMUST00000031456 ClspnQ80YR7 1315 aa15.67■□□□□ 0.1
Pde6b-201ENSMUST00000031456 Tnnt3Q9QZ47 272 aa15.66■□□□□ 0.1
Pde6b-201ENSMUST00000031456 Scaf1Q5U4C3 1256 aaKnown RBP15.61■□□□□ 0.09
Pde6b-201ENSMUST00000031456 Ppargc1bQ8VHJ7 1014 aa15.6■□□□□ 0.09
Pde6b-201ENSMUST00000031456 TimelessQ9R1X4 1197 aa15.56■□□□□ 0.08
Pde6b-201ENSMUST00000031456 Znf316Q6PGE4 1016 aa15.55■□□□□ 0.08
Pde6b-201ENSMUST00000031456 Nolc1E9Q5C9 702 aaKnown RBP15.54■□□□□ 0.08
Pde6b-201ENSMUST00000031456 Mier1Q5UAK0 511 aa15.54■□□□□ 0.08
Pde6b-201ENSMUST00000031456 Ccdc9Q8VC31 543 aaKnown RBP15.54■□□□□ 0.08
Pde6b-201ENSMUST00000031456 Eif5bQ05D44 1216 aaKnown RBP15.52■□□□□ 0.07
Pde6b-201ENSMUST00000031456 AampJ3QN89 436 aa15.51■□□□□ 0.07
Pde6b-201ENSMUST00000031456 Kcnn1Q9EQR3 537 aa15.47■□□□□ 0.07
Pde6b-201ENSMUST00000031456 Rtn4Q99P72 1162 aaKnown RBP15.46■□□□□ 0.06
Pde6b-201ENSMUST00000031456 Ccdc27Q3V036 639 aa15.45■□□□□ 0.06
Pde6b-201ENSMUST00000031456 Supt16hQ920B9 1047 aa15.45■□□□□ 0.06
Pde6b-201ENSMUST00000031456 Taok2Q6ZQ29 1240 aa15.39■□□□□ 0.05
Pde6b-201ENSMUST00000031456 NgefQ8CHT1 710 aa15.39■□□□□ 0.05
Pde6b-201ENSMUST00000031456 Ccdc136Q3TVA9 1136 aa15.35■□□□□ 0.05
Pde6b-201ENSMUST00000031456 Ap3b1Q9Z1T1 1105 aa15.3■□□□□ 0.04
Pde6b-201ENSMUST00000031456 Hsp90aa1P07901 733 aaKnown RBP15.29■□□□□ 0.04
Pde6b-201ENSMUST00000031456 Rbm10Q99KG3 930 aaKnown RBP15.28■□□□□ 0.04
Pde6b-201ENSMUST00000031456 NeflP08551 543 aa15.22■□□□□ 0.03
Pde6b-201ENSMUST00000031456 Dnttip2Q8R2M2 758 aaKnown RBP15.2■□□□□ 0.02
Pde6b-201ENSMUST00000031456 DmtnQ9WV69 405 aa15.2■□□□□ 0.02
Pde6b-201ENSMUST00000031456 ScribQ80U72 1612 aa15.2■□□□□ 0.02
Pde6b-201ENSMUST00000031456 Vgll3P85442 326 aa15.18■□□□□ 0.02
Pde6b-201ENSMUST00000031456 Chrna2Q91X60 512 aa15.17■□□□□ 0.02
Pde6b-201ENSMUST00000031456 Calr4Q3TQS0 420 aa15.16■□□□□ 0.02
Pde6b-201ENSMUST00000031456 Pdcl3Q8BVF2 240 aa15.16■□□□□ 0.02
Pde6b-201ENSMUST00000031456 4933416C03RikQ3V063 378 aa15.15■□□□□ 0.02
Pde6b-201ENSMUST00000031456 Znf692Q3U381 531 aa15.15■□□□□ 0.02
Pde6b-201ENSMUST00000031456 Pak3Q61036 559 aa15.11■□□□□ 0.01
Pde6b-201ENSMUST00000031456 Armcx1Q9CX83 456 aa15.11■□□□□ 0.01
Pde6b-201ENSMUST00000031456 Znf710Q3U288 666 aa15.08■□□□□ 0.01
Pde6b-201ENSMUST00000031456 Gtf2a1Q99PM3 378 aa15.07■□□□□ 0
Pde6b-201ENSMUST00000031456 Myt1lP97500 1187 aa15.05■□□□□ 0
Pde6b-201ENSMUST00000031456 Anp32bQ9EST5 272 aaKnown RBP15.05■□□□□ 0
Pde6b-201ENSMUST00000031456 Ppp4r2Q0VGB7 417 aa15.05■□□□□ -0
Pde6b-201ENSMUST00000031456 Zbtb4Q5F293 982 aa15.04■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms