RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 NischQ80TM9 1593 aa17.64■□□□□ 0.41
Nedd1-201ENSMUST00000020163 Rtl1Q7M732 1744 aa17.31■□□□□ 0.36
Nedd1-201ENSMUST00000020163 Rpgrip1Q9EPQ2 1331 aa17.23■□□□□ 0.35
Nedd1-201ENSMUST00000020163 Gm35339A0A140LHH9 1649 aa17.23■□□□□ 0.35
Nedd1-201ENSMUST00000020163 Abcc9P70170 1546 aa17.21■□□□□ 0.35
Nedd1-201ENSMUST00000020163 Ccdc180J3QNE4 1664 aa17.07■□□□□ 0.32
Nedd1-201ENSMUST00000020163 Rhox8Q6VSS7 320 aa16.74■□□□□ 0.27
Nedd1-201ENSMUST00000020163 Acin1Q9JIX8 1338 aaKnown RBP16.63■□□□□ 0.25
Nedd1-201ENSMUST00000020163 Abcc8B2RUS7 1588 aa16.62■□□□□ 0.25
Nedd1-201ENSMUST00000020163 Zcchc6Q5BLK4 1491 aaKnown RBP16.47■□□□□ 0.23
Nedd1-201ENSMUST00000020163 Dcaf1Q80TR8 1506 aa16.27■□□□□ 0.2
Nedd1-201ENSMUST00000020163 Pcgf6Q99NA9 353 aa16.25■□□□□ 0.19
Nedd1-201ENSMUST00000020163 HrcG5E8J6 738 aa16.12■□□□□ 0.17
Nedd1-201ENSMUST00000020163 Ehmt2Q9Z148 1263 aaKnown RBP15.99■□□□□ 0.15
Nedd1-201ENSMUST00000020163 Trim41Q5NCC3 630 aa15.92■□□□□ 0.14
Nedd1-201ENSMUST00000020163 ScribQ80U72 1612 aa15.84■□□□□ 0.13
Nedd1-201ENSMUST00000020163 Supt5hO55201 1082 aaKnown RBP15.76■□□□□ 0.11
Nedd1-201ENSMUST00000020163 Neurod1Q60867 357 aa15.66■□□□□ 0.1
Nedd1-201ENSMUST00000020163 Las1lA2BE28 776 aaKnown RBP15.56■□□□□ 0.08
Nedd1-201ENSMUST00000020163 Rb1cc1Q9ESK9 1588 aa15.5■□□□□ 0.07
Nedd1-201ENSMUST00000020163 Cep164Q5DU05 1446 aa15.47■□□□□ 0.07
Nedd1-201ENSMUST00000020163 Ccdc136Q3TVA9 1136 aa15.46■□□□□ 0.07
Nedd1-201ENSMUST00000020163 NacadQ5SWP3 1504 aa15.43■□□□□ 0.06
Nedd1-201ENSMUST00000020163 Baz1aO88379 1555 aa15.36■□□□□ 0.05
Nedd1-201ENSMUST00000020163 Kdm5dQ62240 1548 aa15.34■□□□□ 0.05
Nedd1-201ENSMUST00000020163 NefmP08553 848 aa15.33■□□□□ 0.04
Nedd1-201ENSMUST00000020163 Anks4bQ8K3X6 423 aa15.29■□□□□ 0.04
Nedd1-201ENSMUST00000020163 1700123L14RikQ3V2K7 440 aa15.27■□□□□ 0.04
Nedd1-201ENSMUST00000020163 Zeb1Q64318 1117 aa15.24■□□□□ 0.03
Nedd1-201ENSMUST00000020163 Myt1Q8CFC2 1127 aa15.24■□□□□ 0.03
Nedd1-201ENSMUST00000020163 Cngb1E1AZ71 1325 aa15.22■□□□□ 0.03
Nedd1-201ENSMUST00000020163 Sall2Q9QX96 1004 aa15.21■□□□□ 0.02
Nedd1-201ENSMUST00000020163 Csrnp3P59055 597 aa15.12■□□□□ 0.01
Nedd1-201ENSMUST00000020163 Sycp2Q9CUU3 1500 aa15.11■□□□□ 0.01
Nedd1-201ENSMUST00000020163 Mier1Q5UAK0 511 aa15.1■□□□□ 0.01
Nedd1-201ENSMUST00000020163 CenpbP27790 599 aa15.1■□□□□ 0.01
Nedd1-201ENSMUST00000020163 Smarca2Q6DIC0 1577 aa15.09■□□□□ 0.01
Nedd1-201ENSMUST00000020163 Aplp2Q06335 707 aa15.06■□□□□ 0
Nedd1-201ENSMUST00000020163 Crybg2B7ZCC2 1516 aa15.01□□□□□ -0.01
Nedd1-201ENSMUST00000020163 Rsf1E9PWW9 1441 aaKnown RBP15□□□□□ -0.01
Nedd1-201ENSMUST00000020163 Chic1Q8CBW7 227 aa14.91□□□□□ -0.02
Nedd1-201ENSMUST00000020163 Cdk11bP24788 784 aaKnown RBP14.91□□□□□ -0.02
Nedd1-201ENSMUST00000020163 ClspnQ80YR7 1315 aa14.85□□□□□ -0.03
Nedd1-201ENSMUST00000020163 BicraF8VPZ9 1578 aa14.85□□□□□ -0.03
Nedd1-201ENSMUST00000020163 Nop58Q6DFW4 536 aaKnown RBP14.85□□□□□ -0.03
Nedd1-201ENSMUST00000020163 Gab3Q8BSM5 595 aa14.83□□□□□ -0.03
Nedd1-201ENSMUST00000020163 Aebp2Q9Z248 504 aaKnown RBP14.83□□□□□ -0.04
Nedd1-201ENSMUST00000020163 Ccdc88bQ4QRL3 1481 aa14.81□□□□□ -0.04
Nedd1-201ENSMUST00000020163 Wdr66E9Q743 1299 aa14.78□□□□□ -0.04
Nedd1-201ENSMUST00000020163 Golga3P55937 1487 aa14.74□□□□□ -0.05
Nedd1-201ENSMUST00000020163 Brd4Q9ESU6 1400 aaKnown RBP14.71□□□□□ -0.05
Nedd1-201ENSMUST00000020163 DiexfQ8BTT6 772 aaKnown RBP14.63□□□□□ -0.07
Nedd1-201ENSMUST00000020163 UbtfP25976 765 aaKnown RBP14.58□□□□□ -0.08
Nedd1-201ENSMUST00000020163 Pds5bQ4VA53 1446 aaKnown RBP14.56□□□□□ -0.08
Nedd1-201ENSMUST00000020163 TonslQ6NZL6 1363 aa14.56□□□□□ -0.08
Nedd1-201ENSMUST00000020163 Gm38655A0A286YDK6 273 aa14.56□□□□□ -0.08
Nedd1-201ENSMUST00000020163 Top2bQ64511 1612 aa14.56□□□□□ -0.08
Nedd1-201ENSMUST00000020163 Synj1Q8CHC4 1574 aa14.53□□□□□ -0.08
Nedd1-201ENSMUST00000020163 Dnajc5bQ9CQ94 199 aa14.53□□□□□ -0.08
Nedd1-201ENSMUST00000020163 Rapgef2Q8CHG7 1496 aa14.53□□□□□ -0.08
Nedd1-201ENSMUST00000020163 Bcl11aQ9QYE3 773 aa14.52□□□□□ -0.09
Nedd1-201ENSMUST00000020163 Tnnt3Q9QZ47 272 aa14.49□□□□□ -0.09
Nedd1-201ENSMUST00000020163 Cecr2E9Q2Z1 1453 aa14.49□□□□□ -0.09
Nedd1-201ENSMUST00000020163 Ppargc1bQ8VHJ7 1014 aa14.48□□□□□ -0.09
Nedd1-201ENSMUST00000020163 Fam71e1A1L3C1 212 aa14.46□□□□□ -0.09
Nedd1-201ENSMUST00000020163 Hnrnpul2Q00PI9 745 aaKnown RBP14.39□□□□□ -0.11
Nedd1-201ENSMUST00000020163 Atad2bE9Q166 1460 aaKnown RBP14.39□□□□□ -0.11
Nedd1-201ENSMUST00000020163 Thoc2B1AZI6 1594 aaKnown RBP14.39□□□□□ -0.11
Nedd1-201ENSMUST00000020163 Ncapd3Q6ZQK0 1506 aa14.39□□□□□ -0.11
Nedd1-201ENSMUST00000020163 CftrP26361 1476 aa14.38□□□□□ -0.11
Nedd1-201ENSMUST00000020163 Cep162Q6ZQ06 1403 aa14.36□□□□□ -0.11
Nedd1-201ENSMUST00000020163 Cc2d2aQ8CFW7 1633 aa14.35□□□□□ -0.11
Nedd1-201ENSMUST00000020163 SafbD3YXK2 937 aaKnown RBP14.34□□□□□ -0.11
Nedd1-201ENSMUST00000020163 Top2aQ01320 1528 aaKnown RBP14.33□□□□□ -0.12
Nedd1-201ENSMUST00000020163 Cttnbp2B9EJA2 1648 aa14.3□□□□□ -0.12
Nedd1-201ENSMUST00000020163 Mapk8ip2Q9ERE9 830 aa14.29□□□□□ -0.12
Nedd1-201ENSMUST00000020163 Fmn1Q05860 1466 aa14.26□□□□□ -0.13
Nedd1-201ENSMUST00000020163 Eif4g1Q6NZJ6 1600 aaKnown RBP14.26□□□□□ -0.13
Nedd1-201ENSMUST00000020163 Anp32aO35381 247 aa14.25□□□□□ -0.13
Nedd1-201ENSMUST00000020163 Esf1Q3V1V3 845 aaKnown RBP14.25□□□□□ -0.13
Nedd1-201ENSMUST00000020163 Kdm5bQ80Y84 1544 aa14.24□□□□□ -0.13
Nedd1-201ENSMUST00000020163 Rtl5Q5DTT4 599 aa14.23□□□□□ -0.13
Nedd1-201ENSMUST00000020163 Ercc6F8VPZ5 1481 aa14.23□□□□□ -0.13
Nedd1-201ENSMUST00000020163 Smarca4Q3TKT4 1613 aaKnown RBP14.2□□□□□ -0.14
Nedd1-201ENSMUST00000020163 Clip1Q922J3 1391 aa14.2□□□□□ -0.14
Nedd1-201ENSMUST00000020163 Znf710Q3U288 666 aa14.2□□□□□ -0.14
Nedd1-201ENSMUST00000020163 Stra8P70278 393 aa14.16□□□□□ -0.14
Nedd1-201ENSMUST00000020163 Myt1lP97500 1187 aa14.15□□□□□ -0.14
Nedd1-201ENSMUST00000020163 Ap3b1Q9Z1T1 1105 aa14.15□□□□□ -0.14
Nedd1-201ENSMUST00000020163 Rpap1Q80TE0 1409 aa14.15□□□□□ -0.14
Nedd1-201ENSMUST00000020163 Plekhg3Q4VAC9 1341 aa14.13□□□□□ -0.15
Nedd1-201ENSMUST00000020163 Iqgap2Q3UQ44 1575 aa14.13□□□□□ -0.15
Nedd1-201ENSMUST00000020163 TchhA0A0B4J1F9 1599 aa14.1□□□□□ -0.15
Nedd1-201ENSMUST00000020163 Fam135aQ6NS59 1506 aa14.08□□□□□ -0.16
Nedd1-201ENSMUST00000020163 Ifnlr1Q8CGK5 535 aa14.06□□□□□ -0.16
Nedd1-201ENSMUST00000020163 PrkcshO08795 521 aa14.05□□□□□ -0.16
Nedd1-201ENSMUST00000020163 Nolc1E9Q5C9 702 aaKnown RBP14.04□□□□□ -0.16
Nedd1-201ENSMUST00000020163 Pelp1Q9DBD5 1123 aaKnown RBP14.04□□□□□ -0.16
Nedd1-201ENSMUST00000020163 Baz1bQ9Z277 1479 aa14.04□□□□□ -0.16
Nedd1-201ENSMUST00000020163 Ccdc18Q640L5 1455 aa14.03□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms