RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR38, Length 95 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR38	snR38	NOP12	Q08208	459 aa	Known RBP	0.98	□□□□□ -2.25
snR38	snR38	ISC10	P32645	267 aa		0.97	□□□□□ -2.25
snR38	snR38	IRS4	P36115	615 aa	Known RBP	0.97	□□□□□ -2.25
snR38	snR38	ECM2	P38241	364 aa	Known RBP	0.97	□□□□□ -2.25
snR38	snR38	RAD55	P38953	406 aa		0.97	□□□□□ -2.25
snR38	snR38	GAT1	P43574	510 aa		0.97	□□□□□ -2.25
snR38	snR38	ROM1	P53046	1155 aa		0.97	□□□□□ -2.25
snR38	snR38	PLB2	Q03674	706 aa		0.97	□□□□□ -2.25
snR38	snR38	YAP6	Q03935	383 aa		0.97	□□□□□ -2.25
snR38	snR38	YLR257W	Q06146	321 aa	Known RBP	0.97	□□□□□ -2.25
snR38	snR38	RSB1	Q08417	382 aa		0.97	□□□□□ -2.25
snR38	snR38	COQ4	O13525	335 aa		0.96	□□□□□ -2.26
snR38	snR38	RPP2A	P05319	106 aa	Known RBP	0.96	□□□□□ -2.26
snR38	snR38	NPR1	P22211	790 aa		0.96	□□□□□ -2.26
snR38	snR38	RET1	P22276	1149 aa	Known RBP	0.96	□□□□□ -2.26
snR38	snR38	PPZ2	P33329	710 aa		0.96	□□□□□ -2.26
snR38	snR38	MTH1	P35198	433 aa		0.96	□□□□□ -2.26
snR38	snR38	SPC42	P36094	363 aa		0.96	□□□□□ -2.26
snR38	snR38	ATG14	P38270	344 aa		0.96	□□□□□ -2.26
snR38	snR38	GPB2	P39717	880 aa		0.96	□□□□□ -2.26
snR38	snR38	KTR7	P40504	517 aa		0.96	□□□□□ -2.26
snR38	snR38	RGD2	P43556	714 aa		0.96	□□□□□ -2.26
snR38	snR38	STB4	P50104	949 aa		0.96	□□□□□ -2.26
snR38	snR38	MRX10	Q05648	414 aa		0.96	□□□□□ -2.26
snR38	snR38	LAP2	Q10740	671 aa		0.96	□□□□□ -2.26
snR38	snR38	ENO1	P00924	437 aa	Known RBP	0.95	□□□□□ -2.26
snR38	snR38	GAL10	P04397	699 aa		0.95	□□□□□ -2.26
snR38	snR38	TUB1	P09733	447 aa	Known RBP	0.95	□□□□□ -2.26
snR38	snR38	GFA1	P14742	717 aa	Known RBP	0.95	□□□□□ -2.26
snR38	snR38	PEP12	P32854	288 aa		0.95	□□□□□ -2.26
snR38	snR38	SIS2	P36024	562 aa		0.95	□□□□□ -2.26
snR38	snR38	SUL1	P38359	859 aa		0.95	□□□□□ -2.26
snR38	snR38	YAR028W	P39548	234 aa		0.95	□□□□□ -2.26
snR38	snR38	PSY2	P40164	858 aa		0.95	□□□□□ -2.26
snR38	snR38	VPS62	P53285	467 aa		0.95	□□□□□ -2.26
snR38	snR38	CDC55	Q00362	526 aa		0.95	□□□□□ -2.26
snR38	snR38	CDC6	P09119	513 aa		0.94	□□□□□ -2.26
snR38	snR38	GAL2	P13181	574 aa		0.94	□□□□□ -2.26
snR38	snR38	KIN2	P13186	1147 aa	Known RBP	0.94	□□□□□ -2.26
snR38	snR38	CMP2	P14747	604 aa		0.94	□□□□□ -2.26
snR38	snR38	STE4	P18851	423 aa		0.94	□□□□□ -2.26
snR38	snR38	SMC1	P32908	1225 aa		0.94	□□□□□ -2.26
snR38	snR38	YOL073C	Q08232	322 aa		0.94	□□□□□ -2.26
snR38	snR38	TIF6	Q12522	245 aa	Known RBP	0.94	□□□□□ -2.26
snR38	snR38	HCA4	P20448	770 aa	Known RBP	0.93	□□□□□ -2.26
snR38	snR38	EMC1	P25574	760 aa		0.93	□□□□□ -2.26
snR38	snR38	EFT1	P32324	842 aa	Known RBP	0.93	□□□□□ -2.26
snR38	snR38	SUV3	P32580	737 aa		0.93	□□□□□ -2.26
snR38	snR38	RFC5	P38251	354 aa		0.93	□□□□□ -2.26
snR38	snR38	RIX1	P38883	763 aa	Predicted RBP	0.93	□□□□□ -2.26
snR38	snR38	BPL1	P48445	690 aa	Predicted RBP	0.93	□□□□□ -2.26
snR38	snR38	GTF1	P53260	183 aa	Predicted RBP	0.93	□□□□□ -2.26
snR38	snR38	GND2	P53319	492 aa		0.93	□□□□□ -2.26
snR38	snR38	GIS2	P53849	153 aa	Known RBP RIP-Chip data	0.93	□□□□□ -2.26	not detected
snR38	snR38	THI7	Q05998	598 aa		0.93	□□□□□ -2.26
snR38	snR38	HBT1	Q07653	1046 aa	Known RBP	0.93	□□□□□ -2.26
snR38	snR38	PRP5	P21372	849 aa	Predicted RBP	0.92	□□□□□ -2.26
snR38	snR38	RTG2	P32608	588 aa	Known RBP	0.92	□□□□□ -2.26
snR38	snR38	YSC84	P32793	468 aa		0.92	□□□□□ -2.26
snR38	snR38	YKL077W	P36081	392 aa		0.92	□□□□□ -2.26
snR38	snR38	KTR4	P38131	464 aa		0.92	□□□□□ -2.26
snR38	snR38	GUA1	P38625	525 aa	Known RBP	0.92	□□□□□ -2.26
snR38	snR38	NMD3	P38861	518 aa	Known RBP	0.92	□□□□□ -2.26
snR38	snR38	PLB1	P39105	664 aa		0.92	□□□□□ -2.26
snR38	snR38	ALD4	P46367	519 aa	Known RBP	0.92	□□□□□ -2.26
snR38	snR38	MPS1	P54199	764 aa		0.92	□□□□□ -2.26
snR38	snR38	RSA3	Q05942	220 aa	Known RBP	0.92	□□□□□ -2.26
snR38	snR38	HMI1	Q12039	706 aa		0.92	□□□□□ -2.26
snR38	snR38	BNR1	P40450	1375 aa		0.92	□□□□□ -2.26
snR38	snR38	RIM11	P38615	370 aa		0.91	□□□□□ -2.26
snR38	snR38	DED81	P38707	554 aa	Known RBP	0.91	□□□□□ -2.26
snR38	snR38	SHU2	P38957	223 aa		0.91	□□□□□ -2.26
snR38	snR38	RSP5	P39940	809 aa	Known RBP	0.91	□□□□□ -2.26
snR38	snR38	RPL34B	P40525	121 aa	Known RBP	0.91	□□□□□ -2.26
snR38	snR38	MTR4	P47047	1073 aa	Known RBP	0.91	□□□□□ -2.26
snR38	snR38	YJL045W	P47052	634 aa		0.91	□□□□□ -2.26
snR38	snR38	SUT1	P53032	299 aa	Known RBP	0.91	□□□□□ -2.26
snR38	snR38	PUS2	P53167	370 aa		0.91	□□□□□ -2.26
snR38	snR38	YMR206W	Q03695	313 aa		0.91	□□□□□ -2.26
snR38	snR38	CMR1	Q12510	522 aa	Known RBP	0.91	□□□□□ -2.26
snR38	snR38	ORC2	P32833	620 aa		0.9	□□□□□ -2.27
snR38	snR38	MEP2	P41948	499 aa		0.9	□□□□□ -2.27
snR38	snR38	EXG2	P52911	562 aa		0.9	□□□□□ -2.27
snR38	snR38	TDA9	Q04545	1251 aa		0.9	□□□□□ -2.27
snR38	snR38	YLR040C	Q07988	224 aa		0.9	□□□□□ -2.27
snR38	snR38	ENB1	Q08299	606 aa		0.9	□□□□□ -2.27
snR38	snR38	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	0.9	□□□□□ -2.27	not detected
snR38	snR38	PKC1	P24583	1151 aa		0.89	□□□□□ -2.27
snR38	snR38	YAP1801	P38856	637 aa		0.89	□□□□□ -2.27
snR38	snR38	PIK1	P39104	1066 aa		0.89	□□□□□ -2.27
snR38	snR38	SDS3	P40505	327 aa		0.89	□□□□□ -2.27
snR38	snR38	VPS53	P47061	822 aa		0.89	□□□□□ -2.27
snR38	snR38	YJL007C	P47080	104 aa		0.89	□□□□□ -2.27
snR38	snR38	TNA1	P53322	534 aa		0.89	□□□□□ -2.27
snR38	snR38	RNT1	Q02555	471 aa		0.89	□□□□□ -2.27
snR38	snR38	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	0.89	□□□□□ -2.27	not detected
snR38	snR38	RGT2	Q12300	763 aa		0.89	□□□□□ -2.27
snR38	snR38	CDC43	P18898	376 aa		0.88	□□□□□ -2.27
snR38	snR38	SRM1	P21827	482 aa		0.88	□□□□□ -2.27
snR38	snR38	PTP1	P25044	335 aa		0.88	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms