RNA–Protein interactions for RNA: YPR158C-D

YPR158C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YPR158C-D, Length 5,268 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR158C-D	YPR158C-D	IRC10	Q08118	586 aa		4.02	□□□□□ -1.77
YPR158C-D	YPR158C-D	SUT2	Q12286	268 aa		4.02	□□□□□ -1.77
YPR158C-D	YPR158C-D	AI3	P03877	415 aa		4.02	□□□□□ -1.77
YPR158C-D	YPR158C-D	BRF1	P29056	596 aa		4.02	□□□□□ -1.77
YPR158C-D	YPR158C-D	SKP2	P42843	763 aa		4.02	□□□□□ -1.77
YPR158C-D	YPR158C-D	CDA1	Q06702	301 aa		4.02	□□□□□ -1.77
YPR158C-D	YPR158C-D	MAK21	Q12176	1025 aa	Known RBP	4.02	□□□□□ -1.77
YPR158C-D	YPR158C-D	VPS8	P39702	1274 aa		4.02	□□□□□ -1.77
YPR158C-D	YPR158C-D	FMP10	P40098	244 aa		4.02	□□□□□ -1.77
YPR158C-D	YPR158C-D	HXT17	P53631	564 aa		4.02	□□□□□ -1.77
YPR158C-D	YPR158C-D	PCL8	Q08966	492 aa		4.02	□□□□□ -1.77
YPR158C-D	YPR158C-D	MCM1	P11746	286 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	PNT1	P38969	423 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	VTC4	P47075	721 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	RNT1	Q02555	471 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	YPL260W	Q08977	551 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	YLL066C	Q99208	1374 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	NMD2	P38798	1089 aa	Known RBP	4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	FYV10	P40492	516 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	RPL40A	P0CH08	128 aa	Known RBP	4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	RPL40B	P0CH09	128 aa	Known RBP	4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	SDS3	P40505	327 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	SUM1	P46676	1062 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	UBP15	P50101	1230 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	NUP84	P52891	726 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	PUF6	Q04373	656 aa	Known RBP	4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
YPR158C-D	YPR158C-D	PUP2	P32379	260 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	DRE2	P36152	348 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	SAK1	P38990	1142 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	LSB6	P42951	607 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	RSM7	P47150	247 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	ULI1	P43604	169 aa		4.01	□□□□□ -1.77
YPR158C-D	YPR158C-D	URK1	P27515	501 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	YFR018C	P43599	363 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	KIN4	Q01919	800 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	ALE1	Q08548	619 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	MSH2	P25847	964 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	OPT2	Q06593	877 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	CDA2	Q06703	312 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	SFP1	P32432	683 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	GIP1	P38229	639 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	LAM5	P43560	674 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	CCM1	P48237	864 aa	Predicted RBP	4	□□□□□ -1.77
YPR158C-D	YPR158C-D	YDR524C-B	Q3E6R4	66 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	PDE1	P22434	369 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	EPS1	P40557	701 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	JJJ3	P47138	172 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	YRB30	P53107	440 aa	Predicted RBP	4	□□□□□ -1.77
YPR158C-D	YPR158C-D	BRE5	P53741	515 aa	Known RBP	4	□□□□□ -1.77
YPR158C-D	YPR158C-D	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
YPR158C-D	YPR158C-D	CTF3	Q12748	733 aa		4	□□□□□ -1.77
YPR158C-D	YPR158C-D	SSF1	P38789	453 aa	Predicted RBP	3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	CHS6	P40955	746 aa		3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	PRY3	P47033	881 aa		3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	ZPR1	P53303	486 aa	Known RBP	3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	PRO2	P54885	456 aa	Known RBP	3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	RIM20	Q12033	661 aa		3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	YDR461C-A	Q2V2P7	80 aa		3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	ERG6	P25087	383 aa	Known RBP	3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	GAC1	P28006	793 aa		3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	HOG1	P32485	435 aa		3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	TFC3	P34111	1160 aa		3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	BOI1	P38041	980 aa	Known RBP	3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	NOC2	P39744	710 aa	Known RBP	3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
YPR158C-D	YPR158C-D	HRD3	Q05787	833 aa		3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	YPL272C	Q08984	517 aa		3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	MEX67	Q99257	599 aa	Known RBP	3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	TRF5	P48561	642 aa	Known RBP	3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	LEE1	Q02799	301 aa	Known RBP	3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	ISA1	Q07821	250 aa	Predicted RBP	3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	TIF1	P10081	395 aa	Known RBP	3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	APM2	P38700	605 aa		3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	TOF2	Q02208	771 aa		3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	ARP9	Q05123	467 aa		3.99	□□□□□ -1.77
YPR158C-D	YPR158C-D	CLC1	P17891	233 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	CDC73	Q06697	393 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	REH1	Q06709	432 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	MPC54	Q08550	464 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	NBL1	Q3E7Y6	73 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	RTC1	Q08281	1341 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	AI4	P03878	556 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	KTR2	P33550	425 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	YLR001C	Q07895	862 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	NOC3	Q07896	663 aa	Predicted RBP	3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	RRD2	Q12461	358 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	LDB19	Q12502	818 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	HXT16	P47185	567 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	GYL1	Q04322	720 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	OPI10	Q08202	246 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	PYC1	P11154	1178 aa	Known RBP	3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	GDH3	P39708	457 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	VPS25	P47142	202 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	RPT4	P53549	437 aa	Known RBP	3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	SFB2	P53953	876 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	RSM10	Q03201	203 aa		3.98	□□□□□ -1.77
YPR158C-D	YPR158C-D	RSF1	Q05043	376 aa		3.97	□□□□□ -1.77
YPR158C-D	YPR158C-D	COX3	P00420	269 aa		3.97	□□□□□ -1.77
YPR158C-D	YPR158C-D	MED6	P38782	295 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms