RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	SDH5	Q08230	162 aa		4.19	□□□□□ -1.74
APL4	YPR029C	GAS4	Q08271	471 aa		4.19	□□□□□ -1.74
APL4	YPR029C	MER1	P16523	270 aa		4.18	□□□□□ -1.74
APL4	YPR029C	FUR1	P18562	216 aa	Known RBP	4.18	□□□□□ -1.74
APL4	YPR029C	HNM1	P19807	563 aa		4.18	□□□□□ -1.74
APL4	YPR029C	HSP60	P19882	572 aa	Known RBP	4.18	□□□□□ -1.74
APL4	YPR029C	VAN1	P23642	535 aa		4.18	□□□□□ -1.74
APL4	YPR029C	DBF20	P32328	564 aa		4.18	□□□□□ -1.74
APL4	YPR029C	PLC1	P32383	869 aa		4.18	□□□□□ -1.74
APL4	YPR029C	HSP78	P33416	811 aa		4.18	□□□□□ -1.74
APL4	YPR029C	NIC96	P34077	839 aa		4.18	□□□□□ -1.74
APL4	YPR029C	YHL008C	P38750	627 aa		4.18	□□□□□ -1.74
APL4	YPR029C	RSC30	P38781	883 aa		4.18	□□□□□ -1.74
APL4	YPR029C	IRR1	P40541	1150 aa		4.18	□□□□□ -1.74
APL4	YPR029C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
APL4	YPR029C	ATG20	Q07528	640 aa		4.18	□□□□□ -1.74
APL4	YPR029C	RSC58	Q07979	502 aa		4.18	□□□□□ -1.74
APL4	YPR029C	ESC8	Q08119	714 aa		4.18	□□□□□ -1.74
APL4	YPR029C	RPC40	P07703	335 aa	Known RBP	4.18	□□□□□ -1.74
APL4	YPR029C	CDC34	P14682	295 aa		4.18	□□□□□ -1.74
APL4	YPR029C	CCL1	P37366	393 aa		4.18	□□□□□ -1.74
APL4	YPR029C	OTU2	P38747	307 aa	Known RBP	4.18	□□□□□ -1.74
APL4	YPR029C	LRP1	P38801	184 aa	Known RBP	4.18	□□□□□ -1.74
APL4	YPR029C	TIF4631	P39935	952 aa	Known RBP	4.18	□□□□□ -1.74
APL4	YPR029C	LEM3	P42838	414 aa		4.18	□□□□□ -1.74
APL4	YPR029C	SET2	P46995	733 aa	Known RBP	4.18	□□□□□ -1.74
APL4	YPR029C	ACS2	P52910	683 aa	Known RBP	4.18	□□□□□ -1.74
APL4	YPR029C	UFD2	P54860	961 aa		4.18	□□□□□ -1.74
APL4	YPR029C	ADY3	Q07732	790 aa		4.18	□□□□□ -1.74
APL4	YPR029C	TRS33	Q99394	268 aa		4.18	□□□□□ -1.74
APL4	YPR029C	VMA2	P16140	517 aa	Known RBP	4.17	□□□□□ -1.74
APL4	YPR029C	DAL80	P26343	269 aa		4.17	□□□□□ -1.74
APL4	YPR029C	SMY1	P32364	656 aa	Known RBP	4.17	□□□□□ -1.74
APL4	YPR029C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
APL4	YPR029C	ETP1	P38748	585 aa	Known RBP	4.17	□□□□□ -1.74
APL4	YPR029C	RSC8	P43609	557 aa	Known RBP	4.17	□□□□□ -1.74
APL4	YPR029C	YNL193W	P53870	558 aa		4.17	□□□□□ -1.74
APL4	YPR029C	NCS2	P53923	493 aa	Predicted RBP	4.17	□□□□□ -1.74
APL4	YPR029C	HEH2	Q03281	663 aa		4.17	□□□□□ -1.74
APL4	YPR029C	HFD1	Q04458	532 aa		4.17	□□□□□ -1.74
APL4	YPR029C	SPP382	Q06411	708 aa	Predicted RBP	4.17	□□□□□ -1.74
APL4	YPR029C	SPO21	Q12411	609 aa		4.17	□□□□□ -1.74
APL4	YPR029C	SMC6	Q12749	1114 aa		4.17	□□□□□ -1.74
APL4	YPR029C	PET123	P17558	318 aa		4.17	□□□□□ -1.74
APL4	YPR029C	CNS1	P33313	385 aa		4.17	□□□□□ -1.74
APL4	YPR029C	TFC4	P33339	1025 aa		4.17	□□□□□ -1.74
APL4	YPR029C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
APL4	YPR029C	GTT3	P39996	337 aa		4.17	□□□□□ -1.74
APL4	YPR029C	HXT8	P40886	569 aa		4.17	□□□□□ -1.74
APL4	YPR029C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
APL4	YPR029C	YGR053C	P53234	283 aa		4.17	□□□□□ -1.74
APL4	YPR029C	PBP1	P53297	722 aa	Known RBP	4.17	□□□□□ -1.74
APL4	YPR029C	YNL247W	P53852	767 aa	Known RBP	4.17	□□□□□ -1.74
APL4	YPR029C	VPS30	Q02948	557 aa		4.17	□□□□□ -1.74
APL4	YPR029C	YLR287C	Q05881	355 aa		4.17	□□□□□ -1.74
APL4	YPR029C	DBP9	Q06218	594 aa	Known RBP	4.17	□□□□□ -1.74
APL4	YPR029C	ARV1	Q06541	321 aa		4.17	□□□□□ -1.74
APL4	YPR029C	AOS1	Q06624	347 aa		4.17	□□□□□ -1.74
APL4	YPR029C	YDL073W	Q07454	984 aa		4.17	□□□□□ -1.74
APL4	YPR029C	YRR1	Q12172	810 aa		4.17	□□□□□ -1.74
APL4	YPR029C	DPH6	Q12429	685 aa		4.17	□□□□□ -1.74
APL4	YPR029C	CCP1	P00431	361 aa		4.16	□□□□□ -1.74
APL4	YPR029C	RPB4	P20433	221 aa	Predicted RBP	4.16	□□□□□ -1.74
APL4	YPR029C	MCM3	P24279	971 aa	Known RBP	4.16	□□□□□ -1.74
APL4	YPR029C	SPT8	P38915	602 aa		4.16	□□□□□ -1.74
APL4	YPR029C	RTT105	P40063	208 aa		4.16	□□□□□ -1.74
APL4	YPR029C	GPG1	P53130	126 aa		4.16	□□□□□ -1.74
APL4	YPR029C	HST1	P53685	503 aa		4.16	□□□□□ -1.74
APL4	YPR029C	TIM50	Q02776	476 aa		4.16	□□□□□ -1.74
APL4	YPR029C	GAD1	Q04792	585 aa		4.16	□□□□□ -1.74
APL4	YPR029C	ATG38	Q05789	226 aa	Known RBP	4.16	□□□□□ -1.74
APL4	YPR029C	GYP1	Q08484	637 aa		4.16	□□□□□ -1.74
APL4	YPR029C	FAL1	Q12099	399 aa	Known RBP	4.16	□□□□□ -1.74
APL4	YPR029C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
APL4	YPR029C	SPO16	P17122	198 aa		4.16	□□□□□ -1.74
APL4	YPR029C	TRX1	P22217	103 aa	Known RBP	4.16	□□□□□ -1.74
APL4	YPR029C	SCT1	P32784	759 aa		4.16	□□□□□ -1.74
APL4	YPR029C	CIC1	P38779	376 aa	Known RBP	4.16	□□□□□ -1.74
APL4	YPR029C	AIM20	P40451	204 aa		4.16	□□□□□ -1.74
APL4	YPR029C	LAM5	P43560	674 aa		4.16	□□□□□ -1.74
APL4	YPR029C	RET2	P43621	546 aa		4.16	□□□□□ -1.74
APL4	YPR029C	RER1	P25560	188 aa		4.15	□□□□□ -1.74
APL4	YPR029C	RPL8B	P29453	256 aa	Known RBP	4.15	□□□□□ -1.74
APL4	YPR029C	RAD16	P31244	790 aa		4.15	□□□□□ -1.74
APL4	YPR029C	GUT1	P32190	709 aa		4.15	□□□□□ -1.74
APL4	YPR029C	DPH2	P32461	534 aa		4.15	□□□□□ -1.74
APL4	YPR029C	YKL069W	P36088	180 aa		4.15	□□□□□ -1.74
APL4	YPR029C	YHL041W	P38730	149 aa		4.15	□□□□□ -1.74
APL4	YPR029C	PCL7	P40186	285 aa		4.15	□□□□□ -1.74
APL4	YPR029C	MVP1	P40959	511 aa	Known RBP	4.15	□□□□□ -1.74
APL4	YPR029C	SDA1	P53313	767 aa	Known RBP	4.15	□□□□□ -1.74
APL4	YPR029C	HSH49	Q99181	213 aa	Predicted RBP	4.15	□□□□□ -1.74
APL4	YPR029C	PHO81	P17442	1178 aa		4.15	□□□□□ -1.75
APL4	YPR029C	REC107	P21651	314 aa		4.15	□□□□□ -1.75
APL4	YPR029C	MRPL25	P23369	157 aa		4.15	□□□□□ -1.75
APL4	YPR029C	KCC4	P25389	1037 aa		4.15	□□□□□ -1.75
APL4	YPR029C	POL4	P25615	582 aa		4.15	□□□□□ -1.75
APL4	YPR029C	SWC3	P31376	625 aa		4.15	□□□□□ -1.75
APL4	YPR029C	YBR184W	P38299	523 aa		4.15	□□□□□ -1.75
APL4	YPR029C	STS1	P38637	319 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms