RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABP140	YOR239W	SIR4	P11978	1358 aa		4.12	□□□□□ -1.75
ABP140	YOR239W	KRE5	P22023	1365 aa		4.12	□□□□□ -1.75
ABP140	YOR239W	PDR12	Q02785	1511 aa		4.12	□□□□□ -1.75
ABP140	YOR239W	PET122	P10355	254 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	RPO26	P20435	155 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	SPE2	P21182	396 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	ECM32	P32644	1121 aa	Known RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	TBS1	P38114	1094 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	PIH1	P38768	344 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	SSZ1	P38788	538 aa	Known RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	HXT13	P39924	564 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	YIL001W	P40560	513 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	MAD1	P40957	749 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	LSG1	P53145	640 aa	Known RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	TPO2	P53283	614 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	HPC2	Q01448	625 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	YMR111C	Q04461	462 aa	Predicted RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	YLR257W	Q06146	321 aa	Known RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	VAM6	Q07468	1049 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	RIX7	Q07844	837 aa	Known RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	MCM16	Q12262	181 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	WHI5	Q12416	295 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	TRS33	Q99394	268 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	SNT2	P53127	1403 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	YSP2	Q06681	1438 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	TY2B-B	Q12491	1770 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	SEC23	P15303	768 aa	Known RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	TYR1	P20049	452 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	TAF5	P38129	798 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	AMN1	P38285	549 aa	Predicted RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	ARB1	P40024	610 aa	Known RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	YGL242C	P53066	181 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	HOS2	P53096	452 aa	Predicted RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	LSC1	P53598	329 aa	Known RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	RCM1	P53972	490 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	HEF3	P53978	1044 aa	Known RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	RSM28	Q03430	361 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	PLP1	Q04004	230 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	HEL2	Q05580	639 aa	Known RBP	4.11	□□□□□ -1.75
ABP140	YOR239W	CSC1	Q06538	782 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	BUD7	Q08754	746 aa		4.11	□□□□□ -1.75
ABP140	YOR239W	ADE3	P07245	946 aa	Known RBP	4.1	□□□□□ -1.75
ABP140	YOR239W	ADH4	P10127	382 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	FRS2	P15625	503 aa	Known RBP	4.1	□□□□□ -1.75
ABP140	YOR239W	SIT4	P20604	311 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	IME1	P21190	360 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	UBC1	P21734	215 aa	Known RBP	4.1	□□□□□ -1.75
ABP140	YOR239W	PKC1	P24583	1151 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	SEG2	P34250	1132 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	UBP13	P38187	747 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	REI1	P38344	393 aa	Predicted RBP	4.1	□□□□□ -1.75
ABP140	YOR239W	MRX1	P40050	688 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	RTR1	P40084	226 aa	Predicted RBP	4.1	□□□□□ -1.75
ABP140	YOR239W	VID27	P40157	782 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	RPT2	P40327	437 aa	Known RBP	4.1	□□□□□ -1.75
ABP140	YOR239W	MET18	P40469	1032 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	HUL4	P40985	892 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	STB1	P42845	420 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	TRS85	P46944	698 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	YJR079W	P47126	109 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	ARH1	P48360	493 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	RBL2	P48606	106 aa	Known RBP	4.1	□□□□□ -1.75
ABP140	YOR239W	RRP46	P53256	223 aa	Predicted RBP	4.1	□□□□□ -1.75
ABP140	YOR239W	YPR109W	Q06104	294 aa		4.1	□□□□□ -1.75
ABP140	YOR239W	DUR1,2	P32528	1835 aa	Known RBP	4.1	□□□□□ -1.75
ABP140	YOR239W	DOP1	Q03921	1698 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	CDC31	P06704	161 aa	Known RBP	4.09	□□□□□ -1.75
ABP140	YOR239W	PET494	P07390	489 aa	Predicted RBP	4.09	□□□□□ -1.75
ABP140	YOR239W	VAS1	P07806	1104 aa	Known RBP	4.09	□□□□□ -1.75
ABP140	YOR239W	YMR085W	P0CF18	432 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	HMG1	P12683	1054 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	ARG1	P22768	420 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	MBR1	P23493	339 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	YEL043W	P32618	956 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	COY1	P34237	679 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	NUP120	P35729	1037 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	PPX1	P38698	397 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	ETP1	P38748	585 aa	Known RBP	4.09	□□□□□ -1.75
ABP140	YOR239W	SDS3	P40505	327 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	COP1	P53622	1201 aa	Known RBP	4.09	□□□□□ -1.75
ABP140	YOR239W	FAR11	P53917	953 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	TFB3	Q03290	321 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	POB3	Q04636	552 aa	Known RBP	4.09	□□□□□ -1.75
ABP140	YOR239W	FUS2	Q05670	677 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	SGD1	Q06132	899 aa		4.09	□□□□□ -1.75
ABP140	YOR239W	RRP5	Q05022	1729 aa	Known RBP	4.09	□□□□□ -1.75
ABP140	YOR239W	SSA4	P22202	642 aa	Known RBP	4.09	□□□□□ -1.76
ABP140	YOR239W	SEC15	P22224	910 aa		4.09	□□□□□ -1.76
ABP140	YOR239W	MSM1	P22438	575 aa		4.09	□□□□□ -1.76
ABP140	YOR239W	RPC19	P28000	142 aa	Known RBP	4.09	□□□□□ -1.76
ABP140	YOR239W	RIB7	P33312	244 aa		4.09	□□□□□ -1.76
ABP140	YOR239W	HSP78	P33416	811 aa		4.09	□□□□□ -1.76
ABP140	YOR239W	PCH2	P38126	564 aa		4.09	□□□□□ -1.76
ABP140	YOR239W	SAK1	P38990	1142 aa		4.09	□□□□□ -1.76
ABP140	YOR239W	MET10	P39692	1035 aa		4.09	□□□□□ -1.76
ABP140	YOR239W	GVP36	P40531	326 aa	Known RBP	4.09	□□□□□ -1.76
ABP140	YOR239W	OSW7	P43611	510 aa		4.09	□□□□□ -1.76
ABP140	YOR239W	CSN12	P47130	423 aa		4.09	□□□□□ -1.76
ABP140	YOR239W	APT1	P49435	187 aa	Known RBP	4.09	□□□□□ -1.76
ABP140	YOR239W	ARI1	P53111	347 aa	Known RBP	4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms