RNA–Protein interactions for RNA: YMR308C

PSE1, Transcript of Karyopherin/importin that interacts with the nuclear pore complex, yeastyeast

Gene PSE1, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSE1YMR308C TFB1P32776 642 aa5.41□□□□□ -1.54
PSE1YMR308C PET112P33893 541 aa5.41□□□□□ -1.54
PSE1YMR308C MTC2P34246 357 aa5.41□□□□□ -1.54
PSE1YMR308C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
PSE1YMR308C NUP120P35729 1037 aa5.41□□□□□ -1.54
PSE1YMR308C NOP4P37838 685 aaKnown RBP5.41□□□□□ -1.54
PSE1YMR308C YER156CP40093 338 aaKnown RBP5.41□□□□□ -1.54
PSE1YMR308C YFR006WP43590 535 aa5.41□□□□□ -1.54
PSE1YMR308C ATP22P50273 684 aaPredicted RBP5.41□□□□□ -1.54
PSE1YMR308C FOL2P51601 243 aaKnown RBP5.41□□□□□ -1.54
PSE1YMR308C CAF130P53280 1122 aaPredicted RBP5.41□□□□□ -1.54
PSE1YMR308C UBP2Q01476 1272 aa5.41□□□□□ -1.54
PSE1YMR308C YDR090CQ03193 310 aa5.41□□□□□ -1.54
PSE1YMR308C VPS60Q03390 229 aa5.41□□□□□ -1.54
PSE1YMR308C PHM7Q12252 991 aa5.41□□□□□ -1.54
PSE1YMR308C YRF1-4O13559 1382 aa5.4□□□□□ -1.54
PSE1YMR308C YML133CQ03099 1374 aa5.4□□□□□ -1.54
PSE1YMR308C YLL067CQ07888 1374 aa5.4□□□□□ -1.54
PSE1YMR308C YLL066CQ99208 1374 aa5.4□□□□□ -1.54
PSE1YMR308C SAP155P43612 1002 aa5.4□□□□□ -1.54
PSE1YMR308C NIS1P53939 407 aa5.4□□□□□ -1.54
PSE1YMR308C GCR2Q01722 534 aa5.4□□□□□ -1.54
PSE1YMR308C DON1Q05610 365 aa5.4□□□□□ -1.54
PSE1YMR308C RTC5Q12108 567 aaKnown RBP5.4□□□□□ -1.54
PSE1YMR308C YMR084WA2P2R3 262 aa5.4□□□□□ -1.55
PSE1YMR308C SPS1P08458 490 aa5.4□□□□□ -1.55
PSE1YMR308C DPH2P32461 534 aa5.4□□□□□ -1.55
PSE1YMR308C DOM34P33309 386 aa5.4□□□□□ -1.55
PSE1YMR308C CIN4P39110 191 aa5.4□□□□□ -1.55
PSE1YMR308C SAP1P39955 897 aaKnown RBP5.4□□□□□ -1.55
PSE1YMR308C ESL1P40456 1118 aa5.4□□□□□ -1.55
PSE1YMR308C YIR014WP40570 242 aa5.4□□□□□ -1.55
PSE1YMR308C SNZ3P43545 298 aa5.4□□□□□ -1.55
PSE1YMR308C YGR067CP53243 804 aa5.4□□□□□ -1.55
PSE1YMR308C DIP5P53388 608 aa5.4□□□□□ -1.55
PSE1YMR308C SNZ2P53824 298 aa5.4□□□□□ -1.55
PSE1YMR308C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.4□□□□□ -1.55not detected
PSE1YMR308C YMR102CQ03177 834 aa5.4□□□□□ -1.55
PSE1YMR308C ADE13Q05911 482 aaKnown RBP5.4□□□□□ -1.55
PSE1YMR308C SEC2P17065 759 aa5.4□□□□□ -1.55
PSE1YMR308C DPB3P27344 201 aa5.4□□□□□ -1.55
PSE1YMR308C ECM4P36156 370 aa5.4□□□□□ -1.55
PSE1YMR308C CCL1P37366 393 aa5.4□□□□□ -1.55
PSE1YMR308C HAL5P38970 855 aaKnown RBP5.4□□□□□ -1.55
PSE1YMR308C MNT3P40549 630 aa5.4□□□□□ -1.55
PSE1YMR308C SDA1P53313 767 aaKnown RBP5.4□□□□□ -1.55
PSE1YMR308C YOL087CQ99247 1116 aa5.4□□□□□ -1.55
PSE1YMR308C VAN1P23642 535 aa5.39□□□□□ -1.55
PSE1YMR308C SRO9P25567 434 aaKnown RBP5.39□□□□□ -1.55
PSE1YMR308C HSP104P31539 908 aaKnown RBP5.39□□□□□ -1.55
PSE1YMR308C SLA2P33338 968 aa5.39□□□□□ -1.55
PSE1YMR308C RTS1P38903 757 aa5.39□□□□□ -1.55
PSE1YMR308C DAK2P43550 591 aa5.39□□□□□ -1.55
PSE1YMR308C FPK1P53739 893 aa5.39□□□□□ -1.55
PSE1YMR308C INH1P01097 85 aa5.39□□□□□ -1.55
PSE1YMR308C LHS1P36016 881 aa5.39□□□□□ -1.55
PSE1YMR308C REI1P38344 393 aaPredicted RBP5.39□□□□□ -1.55
PSE1YMR308C MSR1P38714 643 aa5.39□□□□□ -1.55
PSE1YMR308C RLP7P40693 322 aaKnown RBP5.39□□□□□ -1.55
PSE1YMR308C RET2P43621 546 aa5.39□□□□□ -1.55
PSE1YMR308C ECL1P48235 211 aa5.39□□□□□ -1.55
PSE1YMR308C YGL140CP53120 1219 aa5.39□□□□□ -1.55
PSE1YMR308C RAT1Q02792 1006 aaKnown RBP5.39□□□□□ -1.55
PSE1YMR308C HOT1Q03213 719 aa5.39□□□□□ -1.55
PSE1YMR308C UFO1Q04511 668 aa5.39□□□□□ -1.55
PSE1YMR308C DIB1Q06819 143 aaPredicted RBP5.39□□□□□ -1.55
PSE1YMR308C PMA2P19657 947 aa5.38□□□□□ -1.55
PSE1YMR308C HCS1P34243 683 aa5.38□□□□□ -1.55
PSE1YMR308C MRPL40P36534 297 aa5.38□□□□□ -1.55
PSE1YMR308C POP2P39008 433 aa5.38□□□□□ -1.55
PSE1YMR308C RSM7P47150 247 aa5.38□□□□□ -1.55
PSE1YMR308C FMP30Q02883 468 aa5.38□□□□□ -1.55
PSE1YMR308C ERO1Q03103 563 aa5.38□□□□□ -1.55
PSE1YMR308C LCD1Q04377 747 aa5.38□□□□□ -1.55
PSE1YMR308C YKU80Q04437 629 aa5.38□□□□□ -1.55
PSE1YMR308C HAT1Q12341 374 aa5.38□□□□□ -1.55
PSE1YMR308C OSH2Q12451 1283 aa5.38□□□□□ -1.55
PSE1YMR308C RAD4P14736 754 aa5.38□□□□□ -1.55
PSE1YMR308C REC107P21651 314 aa5.38□□□□□ -1.55
PSE1YMR308C NPP1P25353 742 aa5.38□□□□□ -1.55
PSE1YMR308C GUT1P32190 709 aa5.38□□□□□ -1.55
PSE1YMR308C RIB7P33312 244 aa5.38□□□□□ -1.55
PSE1YMR308C TFC4P33339 1025 aa5.38□□□□□ -1.55
PSE1YMR308C YHR020WP38708 688 aaKnown RBP5.38□□□□□ -1.55
PSE1YMR308C YJR061WP40355 935 aa5.38□□□□□ -1.55
PSE1YMR308C YFL066CP43538 392 aa5.38□□□□□ -1.55
PSE1YMR308C SSN8P47821 323 aa5.38□□□□□ -1.55
PSE1YMR308C TEA1P47988 759 aa5.38□□□□□ -1.55
PSE1YMR308C UBA2P52488 636 aa5.38□□□□□ -1.55
PSE1YMR308C HST1P53685 503 aa5.38□□□□□ -1.55
PSE1YMR308C YNL144CP53907 740 aa5.38□□□□□ -1.55
PSE1YMR308C ARP5P53946 755 aa5.38□□□□□ -1.55
PSE1YMR308C YNL035CP53962 389 aaKnown RBP5.38□□□□□ -1.55
PSE1YMR308C ESC8Q08119 714 aa5.38□□□□□ -1.55
PSE1YMR308C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
PSE1YMR308C BMH1P29311 267 aaKnown RBP5.38□□□□□ -1.55
PSE1YMR308C SRP40P32583 406 aaPredicted RBP5.38□□□□□ -1.55
PSE1YMR308C YKL222CP35995 705 aa5.38□□□□□ -1.55
PSE1YMR308C UIP5P36137 443 aa5.38□□□□□ -1.55
PSE1YMR308C BAP2P38084 609 aa5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms