RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W RSA3Q05942 220 aaKnown RBP4.86□□□□□ -1.63
DDR48YMR173W TUB2P02557 457 aaKnown RBP4.85□□□□□ -1.63
DDR48YMR173W AIM26P32858 118 aa4.85□□□□□ -1.63
DDR48YMR173W MTR4P47047 1073 aaKnown RBP4.85□□□□□ -1.63
DDR48YMR173W NOG1Q02892 647 aaKnown RBP4.85□□□□□ -1.63
DDR48YMR173W UTP5Q04177 643 aaKnown RBP4.85□□□□□ -1.63
DDR48YMR173W HRK1Q08732 759 aaKnown RBP4.85□□□□□ -1.63
DDR48YMR173W SRO9P25567 434 aaKnown RBP4.84□□□□□ -1.63
DDR48YMR173W YDR132CQ03900 495 aa4.84□□□□□ -1.63
DDR48YMR173W TAD3Q9URQ3 322 aa4.84□□□□□ -1.63
DDR48YMR173W GRS1P38088 690 aaKnown RBP4.83□□□□□ -1.64
DDR48YMR173W HSE1P38753 452 aa4.83□□□□□ -1.64
DDR48YMR173W XKS1P42826 600 aa4.82□□□□□ -1.64
DDR48YMR173W MDJ2P42834 146 aa4.82□□□□□ -1.64
DDR48YMR173W YJL045WP47052 634 aa4.82□□□□□ -1.64
DDR48YMR173W GPI13Q07830 1017 aa4.82□□□□□ -1.64
DDR48YMR173W NOC3Q07896 663 aaPredicted RBP4.82□□□□□ -1.64
DDR48YMR173W PNS1Q12412 539 aa4.82□□□□□ -1.64
DDR48YMR173W ERP5P38819 212 aa4.81□□□□□ -1.64
DDR48YMR173W RSC58Q07979 502 aa4.81□□□□□ -1.64
DDR48YMR173W LAP2Q10740 671 aa4.81□□□□□ -1.64
DDR48YMR173W YBL113CQ7M4S9 792 aa4.81□□□□□ -1.64
DDR48YMR173W MSH3P25336 1018 aa4.8□□□□□ -1.64
DDR48YMR173W TAT2P38967 592 aa4.8□□□□□ -1.64
DDR48YMR173W MPT5P39016 859 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
DDR48YMR173W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
DDR48YMR173W YCS4Q06156 1176 aa4.8□□□□□ -1.64
DDR48YMR173W SPS1P08458 490 aa4.79□□□□□ -1.64
DDR48YMR173W MEF2P39677 819 aa4.79□□□□□ -1.64
DDR48YMR173W SPT20P50875 604 aa4.79□□□□□ -1.64
DDR48YMR173W ENV11P53246 860 aa4.79□□□□□ -1.64
DDR48YMR173W YNR063WP53749 607 aa4.79□□□□□ -1.64
DDR48YMR173W HAT1Q12341 374 aa4.79□□□□□ -1.64
DDR48YMR173W YSC84P32793 468 aa4.78□□□□□ -1.64
DDR48YMR173W QNS1P38795 714 aaKnown RBP4.78□□□□□ -1.64
DDR48YMR173W LAM1P38851 1228 aa4.78□□□□□ -1.64
DDR48YMR173W SAM37P50110 327 aa4.78□□□□□ -1.64
DDR48YMR173W GCN5Q03330 439 aa4.78□□□□□ -1.64
DDR48YMR173W SGD1Q06132 899 aa4.78□□□□□ -1.64
DDR48YMR173W NUT2Q06213 157 aa4.78□□□□□ -1.64
DDR48YMR173W FRT1Q99332 602 aa4.78□□□□□ -1.64
DDR48YMR173W VMA4P22203 233 aaKnown RBP4.77□□□□□ -1.65
DDR48YMR173W PEX13P80667 386 aa4.77□□□□□ -1.65
DDR48YMR173W NBA1Q08229 501 aaKnown RBP4.77□□□□□ -1.65
DDR48YMR173W YOR352WQ08816 343 aa4.77□□□□□ -1.65
DDR48YMR173W ATG14P38270 344 aa4.76□□□□□ -1.65
DDR48YMR173W TAF7Q05021 590 aa4.76□□□□□ -1.65
DDR48YMR173W RCL1Q08096 367 aaPredicted RBP4.76□□□□□ -1.65
DDR48YMR173W CIC1P38779 376 aaKnown RBP4.75□□□□□ -1.65
DDR48YMR173W SSF1P38789 453 aaPredicted RBP4.75□□□□□ -1.65
DDR48YMR173W CYC1P00044 109 aaPredicted RBP4.74□□□□□ -1.65
DDR48YMR173W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65 RIP-Chip
DDR48YMR173W UGA4P32837 571 aa4.74□□□□□ -1.65
DDR48YMR173W RKM2Q03942 479 aa4.74□□□□□ -1.65
DDR48YMR173W PUS9Q12069 462 aa4.74□□□□□ -1.65
DDR48YMR173W PRP40P33203 583 aaKnown RBP4.73□□□□□ -1.65
DDR48YMR173W TRM2P33753 639 aa4.73□□□□□ -1.65
DDR48YMR173W RDH54P38086 958 aa4.73□□□□□ -1.65
DDR48YMR173W PPX1P38698 397 aa4.73□□□□□ -1.65
DDR48YMR173W VPS53P47061 822 aa4.73□□□□□ -1.65
DDR48YMR173W RSM26P47141 266 aa4.73□□□□□ -1.65
DDR48YMR173W HNT2P49775 206 aa4.73□□□□□ -1.65
DDR48YMR173W DUS4Q06063 367 aa4.73□□□□□ -1.65
DDR48YMR173W COQ4O13525 335 aa4.72□□□□□ -1.65
DDR48YMR173W YPT53P36019 220 aa4.72□□□□□ -1.65
DDR48YMR173W ADD66P36040 267 aa4.72□□□□□ -1.65
DDR48YMR173W STM1P39015 273 aaKnown RBP4.72□□□□□ -1.65
DDR48YMR173W SLI1P53304 468 aa4.72□□□□□ -1.65
DDR48YMR173W ULP1Q02724 621 aa4.72□□□□□ -1.65
DDR48YMR173W ROT1Q03691 256 aa4.72□□□□□ -1.65
DDR48YMR173W DOM34P33309 386 aa4.71□□□□□ -1.66
DDR48YMR173W BAP2P38084 609 aa4.71□□□□□ -1.66
DDR48YMR173W YHL050CP38721 697 aa4.71□□□□□ -1.66
DDR48YMR173W PEX28P38848 579 aa4.71□□□□□ -1.66
DDR48YMR173W YHR219WP38900 624 aa4.71□□□□□ -1.66
DDR48YMR173W SEC26P41810 973 aaKnown RBP4.71□□□□□ -1.66
DDR48YMR173W PLB2Q03674 706 aa4.71□□□□□ -1.66
DDR48YMR173W PHO4P07270 312 aaKnown RBP4.7□□□□□ -1.66
DDR48YMR173W HEM13P11353 328 aaKnown RBP4.7□□□□□ -1.66
DDR48YMR173W PUF4P25339 888 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
DDR48YMR173W KIP1P28742 1111 aa4.7□□□□□ -1.66
DDR48YMR173W GCD6P32501 712 aaKnown RBP4.7□□□□□ -1.66
DDR48YMR173W VPS35P34110 944 aa4.7□□□□□ -1.66
DDR48YMR173W CCZ1P38273 704 aa4.7□□□□□ -1.66
DDR48YMR173W MSE1P48525 536 aa4.7□□□□□ -1.66
DDR48YMR173W AFG2P32794 780 aa4.69□□□□□ -1.66
DDR48YMR173W SQT1P35184 431 aa4.69□□□□□ -1.66
DDR48YMR173W MSC6Q08818 692 aaKnown RBP4.69□□□□□ -1.66
DDR48YMR173W SPO21Q12411 609 aa4.69□□□□□ -1.66
DDR48YMR173W KAR2P16474 682 aaKnown RBP4.68□□□□□ -1.66
DDR48YMR173W GPB2P39717 880 aa4.68□□□□□ -1.66
DDR48YMR173W YGL140CP53120 1219 aa4.68□□□□□ -1.66
DDR48YMR173W TNA1P53322 534 aa4.68□□□□□ -1.66
DDR48YMR173W HOS3Q02959 697 aaKnown RBP4.68□□□□□ -1.66
DDR48YMR173W DAL4Q04895 635 aa4.68□□□□□ -1.66
DDR48YMR173W RSB1Q08417 382 aa4.68□□□□□ -1.66
DDR48YMR173W SNF5P18480 905 aa4.67□□□□□ -1.66
DDR48YMR173W HCM1P25364 564 aa4.67□□□□□ -1.66
DDR48YMR173W PIK1P39104 1066 aa4.67□□□□□ -1.66
DDR48YMR173W SRM1P21827 482 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms