RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C YDR132CQ03900 495 aa5.65□□□□□ -1.5
CMS1YLR003C INP54Q08227 384 aaKnown RBP5.65□□□□□ -1.5
CMS1YLR003C YOR352WQ08816 343 aa5.65□□□□□ -1.5
CMS1YLR003C YPT53P36019 220 aa5.64□□□□□ -1.51
CMS1YLR003C ACF4P47129 309 aa5.64□□□□□ -1.51
CMS1YLR003C ATG1P53104 897 aa5.64□□□□□ -1.51
CMS1YLR003C MON1P53129 644 aa5.64□□□□□ -1.51
CMS1YLR003C RSA3Q05942 220 aaKnown RBP5.64□□□□□ -1.51
CMS1YLR003C SPT20P50875 604 aa5.63□□□□□ -1.51
CMS1YLR003C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
CMS1YLR003C LAP2Q10740 671 aa5.63□□□□□ -1.51
CMS1YLR003C SPS1P08458 490 aa5.61□□□□□ -1.51
CMS1YLR003C GCN5Q03330 439 aa5.61□□□□□ -1.51
CMS1YLR003C SGD1Q06132 899 aa5.61□□□□□ -1.51
CMS1YLR003C RSC58Q07979 502 aa5.61□□□□□ -1.51
CMS1YLR003C NBA1Q08229 501 aaKnown RBP5.61□□□□□ -1.51
CMS1YLR003C TRM2P33753 639 aa5.6□□□□□ -1.51
CMS1YLR003C LAM1P38851 1228 aa5.6□□□□□ -1.51
CMS1YLR003C MEF2P39677 819 aa5.6□□□□□ -1.51
CMS1YLR003C YJL045WP47052 634 aa5.6□□□□□ -1.51
CMS1YLR003C NOG1Q02892 647 aaKnown RBP5.6□□□□□ -1.51
CMS1YLR003C UTP5Q04177 643 aaKnown RBP5.6□□□□□ -1.51
CMS1YLR003C PUS9Q12069 462 aa5.6□□□□□ -1.51
CMS1YLR003C ATG14P38270 344 aa5.59□□□□□ -1.51
CMS1YLR003C XKS1P42826 600 aa5.58□□□□□ -1.52
CMS1YLR003C YSC84P32793 468 aa5.56□□□□□ -1.52
CMS1YLR003C QNS1P38795 714 aaKnown RBP5.56□□□□□ -1.52
CMS1YLR003C MSE1P48525 536 aa5.56□□□□□ -1.52
CMS1YLR003C HNT2P49775 206 aa5.56□□□□□ -1.52
CMS1YLR003C NOC3Q07896 663 aaPredicted RBP5.56□□□□□ -1.52
CMS1YLR003C MSH3P25336 1018 aa5.55□□□□□ -1.52
CMS1YLR003C YNR063WP53749 607 aa5.55□□□□□ -1.52
CMS1YLR003C SUB2Q07478 446 aaKnown RBP5.55□□□□□ -1.52
CMS1YLR003C PUF4P25339 888 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
CMS1YLR003C YCS4Q06156 1176 aa5.54□□□□□ -1.52
CMS1YLR003C CYC1P00044 109 aaPredicted RBP5.53□□□□□ -1.52
CMS1YLR003C VMA4P22203 233 aaKnown RBP5.53□□□□□ -1.52
CMS1YLR003C DOM34P33309 386 aa5.53□□□□□ -1.52
CMS1YLR003C COQ4O13525 335 aa5.52□□□□□ -1.53
CMS1YLR003C VPS53P47061 822 aa5.52□□□□□ -1.53
CMS1YLR003C SAM37P50110 327 aa5.52□□□□□ -1.53
CMS1YLR003C SLI1P53304 468 aa5.52□□□□□ -1.53
CMS1YLR003C PEX13P80667 386 aa5.52□□□□□ -1.53
CMS1YLR003C CCZ1P38273 704 aa5.51□□□□□ -1.53
CMS1YLR003C SEC26P41810 973 aaKnown RBP5.51□□□□□ -1.53
CMS1YLR003C RPL34AP87262 121 aaPredicted RBP5.51□□□□□ -1.53
CMS1YLR003C ROT1Q03691 256 aa5.51□□□□□ -1.53
CMS1YLR003C DUS4Q06063 367 aa5.51□□□□□ -1.53
CMS1YLR003C HCM1P25364 564 aa5.5□□□□□ -1.53
CMS1YLR003C RKM2Q03942 479 aa5.5□□□□□ -1.53
CMS1YLR003C RCL1Q08096 367 aaPredicted RBP5.5□□□□□ -1.53
CMS1YLR003C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
CMS1YLR003C URN1Q06525 465 aaKnown RBP5.49□□□□□ -1.53
CMS1YLR003C TRL1P09880 827 aaKnown RBP5.48□□□□□ -1.53
CMS1YLR003C CIC1P38779 376 aaKnown RBP5.48□□□□□ -1.53
CMS1YLR003C SUN4P53616 420 aa5.48□□□□□ -1.53
CMS1YLR003C PLB2Q03674 706 aa5.48□□□□□ -1.53
CMS1YLR003C GPI13Q07830 1017 aa5.48□□□□□ -1.53
CMS1YLR003C STE11P23561 717 aa5.47□□□□□ -1.53
CMS1YLR003C BAP2P38084 609 aa5.47□□□□□ -1.53
CMS1YLR003C RSM26P47141 266 aa5.47□□□□□ -1.53
CMS1YLR003C MNN10P50108 393 aaKnown RBP5.47□□□□□ -1.53
CMS1YLR003C YML122CQ03207 126 aa5.47□□□□□ -1.53
CMS1YLR003C RSB1Q08417 382 aa5.47□□□□□ -1.53
CMS1YLR003C ADD66P36040 267 aa5.46□□□□□ -1.54
CMS1YLR003C MCM6P53091 1017 aaKnown RBP5.46□□□□□ -1.54
CMS1YLR003C TNA1P53322 534 aa5.46□□□□□ -1.54
CMS1YLR003C CTF4Q01454 927 aa5.46□□□□□ -1.54
CMS1YLR003C RXT3Q07458 294 aa5.46□□□□□ -1.54
CMS1YLR003C NTO1Q12311 748 aa5.46□□□□□ -1.54
CMS1YLR003C CDC20P26309 610 aa5.45□□□□□ -1.54
CMS1YLR003C PMI40P29952 429 aaKnown RBP5.45□□□□□ -1.54
CMS1YLR003C HOS3Q02959 697 aaKnown RBP5.45□□□□□ -1.54
CMS1YLR003C ACK1Q07622 623 aaPredicted RBP5.45□□□□□ -1.54
CMS1YLR003C KIP1P28742 1111 aa5.44□□□□□ -1.54
CMS1YLR003C LST4P34239 828 aa5.44□□□□□ -1.54
CMS1YLR003C SQT1P35184 431 aa5.44□□□□□ -1.54
CMS1YLR003C GRS1P38088 690 aaKnown RBP5.44□□□□□ -1.54
CMS1YLR003C PIK1P39104 1066 aa5.44□□□□□ -1.54
CMS1YLR003C AIM21P40563 679 aa5.44□□□□□ -1.54
CMS1YLR003C TMA10Q06177 86 aa5.44□□□□□ -1.54
CMS1YLR003C RAD53P22216 821 aa5.43□□□□□ -1.54
CMS1YLR003C RDH54P38086 958 aa5.43□□□□□ -1.54
CMS1YLR003C RSM24Q03976 319 aa5.43□□□□□ -1.54
CMS1YLR003C FRT1Q99332 602 aa5.43□□□□□ -1.54
CMS1YLR003C GAL10P04397 699 aa5.42□□□□□ -1.54
CMS1YLR003C KAR2P16474 682 aaKnown RBP5.42□□□□□ -1.54
CMS1YLR003C PRP40P33203 583 aaKnown RBP5.42□□□□□ -1.54
CMS1YLR003C PEX28P38848 579 aa5.42□□□□□ -1.54
CMS1YLR003C GPB1Q08886 897 aa5.42□□□□□ -1.54
CMS1YLR003C SPO21Q12411 609 aa5.42□□□□□ -1.54
CMS1YLR003C UGA4P32837 571 aa5.41□□□□□ -1.54
CMS1YLR003C GPB2P39717 880 aa5.41□□□□□ -1.54
CMS1YLR003C MDJ2P42834 146 aa5.41□□□□□ -1.54
CMS1YLR003C ULP1Q02724 621 aa5.41□□□□□ -1.54
CMS1YLR003C NUT2Q06213 157 aa5.41□□□□□ -1.54
CMS1YLR003C CMP2P14747 604 aa5.4□□□□□ -1.54
CMS1YLR003C PBP1P53297 722 aaKnown RBP5.4□□□□□ -1.54
CMS1YLR003C SNF5P18480 905 aa5.39□□□□□ -1.55
CMS1YLR003C SRM1P21827 482 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms