RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C EPS1P40557 701 aa9.77□□□□□ -0.85
SOD2YHR008C ENP2P48234 707 aaKnown RBP9.77□□□□□ -0.85
SOD2YHR008C SKY1Q03656 742 aa9.77□□□□□ -0.85
SOD2YHR008C ATG11Q12527 1178 aa9.77□□□□□ -0.85
SOD2YHR008C TY1B-AO13527 1196 aaKnown RBP9.76□□□□□ -0.85
SOD2YHR008C STB5P38699 743 aa9.76□□□□□ -0.85
SOD2YHR008C ISW2Q08773 1120 aa9.76□□□□□ -0.85
SOD2YHR008C AFT1P22149 690 aa9.75□□□□□ -0.85
SOD2YHR008C SPO1P53541 631 aa9.75□□□□□ -0.85
SOD2YHR008C TEL1P38110 2787 aa9.74□□□□□ -0.85
SOD2YHR008C ACE2P21192 770 aa9.74□□□□□ -0.85
SOD2YHR008C FUB1P25659 250 aa9.74□□□□□ -0.85
SOD2YHR008C SLN1P39928 1220 aaPredicted RBP9.74□□□□□ -0.85
SOD2YHR008C HUL4P40985 892 aa9.74□□□□□ -0.85
SOD2YHR008C ALO1P54783 526 aaKnown RBP9.74□□□□□ -0.85
SOD2YHR008C VPS27P40343 622 aaKnown RBP9.73□□□□□ -0.85
SOD2YHR008C INP51P40559 946 aaKnown RBP9.73□□□□□ -0.85
SOD2YHR008C BBC1P47068 1157 aa9.73□□□□□ -0.85
SOD2YHR008C MLC1P53141 149 aa9.73□□□□□ -0.85
SOD2YHR008C FOL1P53848 824 aa9.73□□□□□ -0.85
SOD2YHR008C UTP4Q06679 776 aaKnown RBP9.73□□□□□ -0.85
SOD2YHR008C COQ1P18900 473 aa9.72□□□□□ -0.85
SOD2YHR008C PBY1P38254 753 aa9.72□□□□□ -0.85
SOD2YHR008C VPS45P38932 577 aa9.72□□□□□ -0.85
SOD2YHR008C ECM16Q04217 1267 aaKnown RBP9.72□□□□□ -0.85
SOD2YHR008C NOT3P06102 836 aaKnown RBP9.71□□□□□ -0.86
SOD2YHR008C SPO71Q03868 1245 aa9.71□□□□□ -0.86
SOD2YHR008C MMR1Q06324 491 aa9.71□□□□□ -0.86
SOD2YHR008C TAH18Q12181 623 aa9.71□□□□□ -0.86
SOD2YHR008C MSD1P15179 658 aaKnown RBP9.7□□□□□ -0.86
SOD2YHR008C PRO3P32263 286 aaKnown RBP9.7□□□□□ -0.86
SOD2YHR008C RPS7BP48164 190 aaKnown RBP9.7□□□□□ -0.86
SOD2YHR008C VPS30Q02948 557 aa9.7□□□□□ -0.86
SOD2YHR008C PKH3Q03306 898 aaPredicted RBP9.7□□□□□ -0.86
SOD2YHR008C NUC1P08466 329 aa9.69□□□□□ -0.86
SOD2YHR008C SMY2P32909 740 aaKnown RBP9.69□□□□□ -0.86
SOD2YHR008C OSH3P38713 996 aaKnown RBP9.69□□□□□ -0.86
SOD2YHR008C RRP8P38961 392 aaKnown RBP9.69□□□□□ -0.86
SOD2YHR008C YIL092WP40497 633 aa9.69□□□□□ -0.86
SOD2YHR008C OPT1P40897 799 aa9.69□□□□□ -0.86
SOD2YHR008C LIF1P53150 421 aa9.69□□□□□ -0.86
SOD2YHR008C LCD1Q04377 747 aa9.69□□□□□ -0.86
SOD2YHR008C RKM4Q12504 494 aa9.69□□□□□ -0.86
SOD2YHR008C PPZ1P26570 692 aa9.68□□□□□ -0.86
SOD2YHR008C PTA1Q01329 785 aaPredicted RBP9.68□□□□□ -0.86
SOD2YHR008C PDR18P53756 1333 aa9.67□□□□□ -0.86
SOD2YHR008C CHO2P05374 869 aaKnown RBP9.67□□□□□ -0.86
SOD2YHR008C LSB1P53281 241 aa9.67□□□□□ -0.86
SOD2YHR008C YLL058WQ12198 575 aa9.67□□□□□ -0.86
SOD2YHR008C KIN82P25341 720 aa9.66□□□□□ -0.86
SOD2YHR008C ECM21P38167 1117 aaKnown RBP9.66□□□□□ -0.86
SOD2YHR008C BDP1P46678 594 aa9.66□□□□□ -0.86
SOD2YHR008C RPS15Q01855 142 aaKnown RBP9.66□□□□□ -0.86
SOD2YHR008C NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86not detected
SOD2YHR008C MAG2Q06436 670 aaKnown RBP9.66□□□□□ -0.86
SOD2YHR008C CLF1Q12309 687 aaPredicted RBP9.66□□□□□ -0.86
SOD2YHR008C RAD2P07276 1031 aa9.65□□□□□ -0.86
SOD2YHR008C CUP1-1P0CX80 61 aa9.65□□□□□ -0.86
SOD2YHR008C CUP1-2P0CX81 61 aa9.65□□□□□ -0.86
SOD2YHR008C MBR1P23493 339 aa9.65□□□□□ -0.86
SOD2YHR008C MYO3P36006 1272 aa9.65□□□□□ -0.86
SOD2YHR008C FMS1P50264 508 aa9.65□□□□□ -0.86
SOD2YHR008C PIB2P53191 635 aa9.65□□□□□ -0.86
SOD2YHR008C YLR326WQ06170 240 aaKnown RBP9.65□□□□□ -0.86
SOD2YHR008C SUE1Q06524 206 aa9.65□□□□□ -0.86
SOD2YHR008C IRC10Q08118 586 aa9.65□□□□□ -0.86
SOD2YHR008C RIT1P23796 513 aa9.64□□□□□ -0.87
SOD2YHR008C SUV3P32580 737 aa9.64□□□□□ -0.87
SOD2YHR008C SLX1P38324 304 aa9.64□□□□□ -0.87
SOD2YHR008C ILV3P39522 585 aaKnown RBP9.64□□□□□ -0.87
SOD2YHR008C CTR1P49573 406 aa9.64□□□□□ -0.87
SOD2YHR008C YRB30P53107 440 aaPredicted RBP9.64□□□□□ -0.87
SOD2YHR008C CUS1Q02554 436 aaPredicted RBP9.64□□□□□ -0.87
SOD2YHR008C PNG1Q02890 363 aa9.64□□□□□ -0.87
SOD2YHR008C CDC45Q08032 650 aa9.64□□□□□ -0.87
SOD2YHR008C KEX2P13134 814 aa9.63□□□□□ -0.87
SOD2YHR008C RPL8BP29453 256 aaKnown RBP9.63□□□□□ -0.87
SOD2YHR008C APN2P38207 520 aa9.63□□□□□ -0.87
SOD2YHR008C UFD2P54860 961 aa9.63□□□□□ -0.87
SOD2YHR008C CAN1P04817 590 aa9.62□□□□□ -0.87
SOD2YHR008C SEC20P28791 383 aa9.62□□□□□ -0.87
SOD2YHR008C MET1P36150 593 aa9.62□□□□□ -0.87
SOD2YHR008C FAF1P40546 346 aaPredicted RBP9.62□□□□□ -0.87
SOD2YHR008C YJL045WP47052 634 aa9.62□□□□□ -0.87
SOD2YHR008C UBP15P50101 1230 aa9.62□□□□□ -0.87
SOD2YHR008C RPT6Q01939 405 aaKnown RBP9.62□□□□□ -0.87
SOD2YHR008C PRC1P00729 532 aa9.61□□□□□ -0.87
SOD2YHR008C OPI1P21957 404 aa9.61□□□□□ -0.87
SOD2YHR008C MSS51P32335 436 aa9.61□□□□□ -0.87
SOD2YHR008C RME1P32338 300 aaKnown RBP9.61□□□□□ -0.87
SOD2YHR008C UGA4P32837 571 aa9.61□□□□□ -0.87
SOD2YHR008C NDT80P38830 627 aa9.61□□□□□ -0.87
SOD2YHR008C BUD16P39988 312 aa9.61□□□□□ -0.87
SOD2YHR008C PIG1Q06216 648 aa9.61□□□□□ -0.87
SOD2YHR008C IMG2P25642 146 aaPredicted RBP9.6□□□□□ -0.87
SOD2YHR008C ANP1P32629 500 aa9.6□□□□□ -0.87
SOD2YHR008C HXT5P38695 592 aa9.6□□□□□ -0.87
SOD2YHR008C HMF1P40037 129 aaKnown RBP9.6□□□□□ -0.87
SOD2YHR008C YLR455WQ06188 304 aa9.6□□□□□ -0.87
SOD2YHR008C COQ8P27697 501 aa9.59□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms