RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C NSE3Q05541 303 aa4.8□□□□□ -1.64
MSM1YGR171C TDA5Q06417 326 aaKnown RBP4.8□□□□□ -1.64
MSM1YGR171C STI1P15705 589 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
MSM1YGR171C MKK2P32491 506 aa4.8□□□□□ -1.64
MSM1YGR171C PPG1P32838 368 aa4.8□□□□□ -1.64
MSM1YGR171C ERS1P17261 260 aa4.79□□□□□ -1.64
MSM1YGR171C LYP1P32487 611 aa4.79□□□□□ -1.64
MSM1YGR171C YKL069WP36088 180 aa4.79□□□□□ -1.64
MSM1YGR171C SPF1P39986 1215 aaKnown RBP4.79□□□□□ -1.64
MSM1YGR171C YNR014WP53719 212 aa4.79□□□□□ -1.64
MSM1YGR171C YNR063WP53749 607 aa4.79□□□□□ -1.64
MSM1YGR171C RKM2Q03942 479 aa4.79□□□□□ -1.64
MSM1YGR171C SYP1P25623 870 aaKnown RBP4.78□□□□□ -1.64
MSM1YGR171C BOI2P39969 1040 aa4.78□□□□□ -1.64
MSM1YGR171C SPO74P45819 413 aa4.78□□□□□ -1.64
MSM1YGR171C AVO1Q08236 1176 aa4.78□□□□□ -1.64
MSM1YGR171C LAP2Q10740 671 aa4.78□□□□□ -1.64
MSM1YGR171C ALG6Q12001 544 aaKnown RBP4.78□□□□□ -1.64
MSM1YGR171C CDC53Q12018 815 aaKnown RBP4.78□□□□□ -1.64
MSM1YGR171C AI1P03875 834 aa4.77□□□□□ -1.65
MSM1YGR171C CIT2P08679 460 aa4.77□□□□□ -1.65
MSM1YGR171C RRM3P38766 723 aa4.77□□□□□ -1.65
MSM1YGR171C NAN1Q02931 896 aaKnown RBP4.77□□□□□ -1.65
MSM1YGR171C RPN4Q03465 531 aa4.77□□□□□ -1.65
MSM1YGR171C YOR223WQ12015 292 aa4.77□□□□□ -1.65
MSM1YGR171C YOR131CQ12486 218 aa4.77□□□□□ -1.65
MSM1YGR171C AGP1P25376 633 aa4.77□□□□□ -1.65
MSM1YGR171C TAT2P38967 592 aa4.77□□□□□ -1.65
MSM1YGR171C YAR028WP39548 234 aa4.77□□□□□ -1.65
MSM1YGR171C KIP3P53086 805 aaKnown RBP4.77□□□□□ -1.65
MSM1YGR171C RAT1Q02792 1006 aaKnown RBP4.77□□□□□ -1.65
MSM1YGR171C TRK2P28584 889 aa4.76□□□□□ -1.65
MSM1YGR171C ABD1P32783 436 aaPredicted RBP4.76□□□□□ -1.65
MSM1YGR171C HSE1P38753 452 aa4.76□□□□□ -1.65
MSM1YGR171C CNN1P43618 361 aa4.76□□□□□ -1.65
MSM1YGR171C TIF35Q04067 274 aaKnown RBP4.76□□□□□ -1.65
MSM1YGR171C YLR225CQ05948 407 aaKnown RBP4.76□□□□□ -1.65
MSM1YGR171C BDF2Q07442 638 aa4.76□□□□□ -1.65
MSM1YGR171C INO1P11986 533 aa4.75□□□□□ -1.65
MSM1YGR171C RAD4P14736 754 aa4.75□□□□□ -1.65
MSM1YGR171C MCM7P38132 845 aa4.75□□□□□ -1.65
MSM1YGR171C SEA4P38164 1038 aa4.75□□□□□ -1.65
MSM1YGR171C SNF7P39929 240 aaKnown RBP4.75□□□□□ -1.65
MSM1YGR171C SBE2P42223 864 aaKnown RBP4.75□□□□□ -1.65
MSM1YGR171C YGR045CP53229 120 aa4.75□□□□□ -1.65
MSM1YGR171C SHE9Q04172 456 aa4.75□□□□□ -1.65
MSM1YGR171C PTC5Q12511 572 aa4.75□□□□□ -1.65
MSM1YGR171C DBP5P20449 482 aaKnown RBP4.75□□□□□ -1.65
MSM1YGR171C SBA1P28707 216 aaKnown RBP4.75□□□□□ -1.65
MSM1YGR171C AFG2P32794 780 aa4.75□□□□□ -1.65
MSM1YGR171C MOT2P34909 587 aaKnown RBP4.75□□□□□ -1.65
MSM1YGR171C ALG3P38179 458 aa4.75□□□□□ -1.65
MSM1YGR171C VPS53P47061 822 aa4.75□□□□□ -1.65
MSM1YGR171C HUL5P53119 910 aa4.75□□□□□ -1.65
MSM1YGR171C ELA1P53861 379 aaPredicted RBP4.75□□□□□ -1.65
MSM1YGR171C DOT1Q04089 582 aaKnown RBP4.75□□□□□ -1.65
MSM1YGR171C ESC2Q06340 456 aa4.75□□□□□ -1.65
MSM1YGR171C AOS1Q06624 347 aa4.75□□□□□ -1.65
MSM1YGR171C RKM4Q12504 494 aa4.75□□□□□ -1.65
MSM1YGR171C YKL107WP34251 309 aa4.74□□□□□ -1.65
MSM1YGR171C MRP8P35719 219 aa4.74□□□□□ -1.65
MSM1YGR171C RRP14P36080 434 aaKnown RBP4.74□□□□□ -1.65
MSM1YGR171C VBA5P36172 582 aa4.74□□□□□ -1.65
MSM1YGR171C PBP2P38151 413 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
MSM1YGR171C BUD6P41697 788 aa4.74□□□□□ -1.65
MSM1YGR171C TIM54P47045 478 aa4.74□□□□□ -1.65
MSM1YGR171C ALG12P53730 551 aa4.74□□□□□ -1.65
MSM1YGR171C SPO75Q07798 868 aa4.74□□□□□ -1.65
MSM1YGR171C THI72Q08579 599 aa4.74□□□□□ -1.65
MSM1YGR171C TY1A-NL1Q12391 440 aaKnown RBP4.74□□□□□ -1.65
MSM1YGR171C YBR184WP38299 523 aa4.73□□□□□ -1.65
MSM1YGR171C IRR1P40541 1150 aa4.73□□□□□ -1.65
MSM1YGR171C PUF4P25339 888 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
MSM1YGR171C PIN4P34217 668 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
MSM1YGR171C RGD1P38339 666 aa4.72□□□□□ -1.65
MSM1YGR171C FPR3P38911 411 aaKnown RBP4.72□□□□□ -1.65
MSM1YGR171C YGL176CP46945 554 aa4.72□□□□□ -1.65
MSM1YGR171C HNT2P49775 206 aa4.72□□□□□ -1.65
MSM1YGR171C NCE103P53615 221 aa4.72□□□□□ -1.65
MSM1YGR171C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65 RIP-Chip
MSM1YGR171C NFS1P25374 497 aa4.72□□□□□ -1.65
MSM1YGR171C MLS1P30952 554 aa4.72□□□□□ -1.65
MSM1YGR171C SFA1P32771 386 aa4.72□□□□□ -1.65
MSM1YGR171C STE5P32917 917 aa4.72□□□□□ -1.65
MSM1YGR171C NNK1P36003 928 aa4.72□□□□□ -1.65
MSM1YGR171C QNS1P38795 714 aaKnown RBP4.72□□□□□ -1.65
MSM1YGR171C MPH1P40562 993 aa4.72□□□□□ -1.65
MSM1YGR171C RSA3Q05942 220 aaKnown RBP4.72□□□□□ -1.65
MSM1YGR171C TDA6Q06466 467 aa4.72□□□□□ -1.65
MSM1YGR171C GAS5Q08193 484 aa4.72□□□□□ -1.65
MSM1YGR171C OSH2Q12451 1283 aa4.72□□□□□ -1.65
MSM1YGR171C RET1P22276 1149 aaKnown RBP4.71□□□□□ -1.66
MSM1YGR171C GPT2P36148 743 aa4.71□□□□□ -1.66
MSM1YGR171C MSH4P40965 878 aaPredicted RBP4.71□□□□□ -1.66
MSM1YGR171C BUD9P53226 547 aa4.71□□□□□ -1.66
MSM1YGR171C RSC6P25632 483 aa4.7□□□□□ -1.66
MSM1YGR171C SMY2P32909 740 aaKnown RBP4.7□□□□□ -1.66
MSM1YGR171C PBY1P38254 753 aa4.7□□□□□ -1.66
MSM1YGR171C MCX1P38323 520 aaPredicted RBP4.7□□□□□ -1.66
MSM1YGR171C YGR125WP53273 1036 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms