RNA–Protein interactions for RNA: YGR169C-A

LSO2, Transcript of Putative protein of unknown function, yeast

Gene LSO2, Length 279 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSO2	YGR169C-A	GIC2	Q06648	383 aa		3.25	□□□□□ -1.89
LSO2	YGR169C-A	AVO1	Q08236	1176 aa		3.25	□□□□□ -1.89
LSO2	YGR169C-A	PGM1	P33401	570 aa	Known RBP	3.24	□□□□□ -1.89
LSO2	YGR169C-A	HSE1	P38753	452 aa		3.24	□□□□□ -1.89
LSO2	YGR169C-A	YAR028W	P39548	234 aa		3.24	□□□□□ -1.89
LSO2	YGR169C-A	KRI1	P42846	591 aa	Known RBP	3.24	□□□□□ -1.89
LSO2	YGR169C-A	CCT8	P47079	568 aa	Known RBP	3.24	□□□□□ -1.89
LSO2	YGR169C-A	MTC5	Q03897	1148 aa		3.24	□□□□□ -1.89
LSO2	YGR169C-A	GAS5	Q08193	484 aa		3.24	□□□□□ -1.89
LSO2	YGR169C-A	RET1	P22276	1149 aa	Known RBP	3.23	□□□□□ -1.89
LSO2	YGR169C-A	MKK2	P32491	506 aa		3.23	□□□□□ -1.89
LSO2	YGR169C-A	SMY2	P32909	740 aa	Known RBP	3.23	□□□□□ -1.89
LSO2	YGR169C-A	RER2	P35196	286 aa		3.23	□□□□□ -1.89
LSO2	YGR169C-A	ATG14	P38270	344 aa		3.23	□□□□□ -1.89
LSO2	YGR169C-A	MSH4	P40965	878 aa	Predicted RBP	3.23	□□□□□ -1.89
LSO2	YGR169C-A	ALT1	P52893	592 aa		3.23	□□□□□ -1.89
LSO2	YGR169C-A	MRL1	Q06815	381 aa		3.23	□□□□□ -1.89
LSO2	YGR169C-A	ALG6	Q12001	544 aa	Known RBP	3.23	□□□□□ -1.89
LSO2	YGR169C-A	MSB1	P21339	1137 aa	Known RBP	3.22	□□□□□ -1.89
LSO2	YGR169C-A	AFG2	P32794	780 aa		3.22	□□□□□ -1.89
LSO2	YGR169C-A	GPT2	P36148	743 aa		3.22	□□□□□ -1.89
LSO2	YGR169C-A	RGD1	P38339	666 aa		3.22	□□□□□ -1.89
LSO2	YGR169C-A	SAF1	P38352	637 aa		3.22	□□□□□ -1.89
LSO2	YGR169C-A	QNS1	P38795	714 aa	Known RBP	3.22	□□□□□ -1.89
LSO2	YGR169C-A	SPO74	P45819	413 aa		3.22	□□□□□ -1.89
LSO2	YGR169C-A	ELA1	P53861	379 aa	Predicted RBP	3.22	□□□□□ -1.89
LSO2	YGR169C-A	ROD1	Q02805	837 aa		3.22	□□□□□ -1.89
LSO2	YGR169C-A	EEB1	Q02891	456 aa		3.22	□□□□□ -1.89
LSO2	YGR169C-A	YOR059C	Q08448	450 aa	Known RBP	3.22	□□□□□ -1.89
LSO2	YGR169C-A	RPS4A	P0CX35	261 aa	Known RBP	3.21	□□□□□ -1.9
LSO2	YGR169C-A	RPS4B	P0CX36	261 aa	Known RBP	3.21	□□□□□ -1.9
LSO2	YGR169C-A	NFS1	P25374	497 aa		3.21	□□□□□ -1.9
LSO2	YGR169C-A	SYP1	P25623	870 aa	Known RBP	3.21	□□□□□ -1.9
LSO2	YGR169C-A	LYP1	P32487	611 aa		3.21	□□□□□ -1.9
LSO2	YGR169C-A	CNN1	P43618	361 aa		3.21	□□□□□ -1.9
LSO2	YGR169C-A	CWC24	P53769	259 aa		3.21	□□□□□ -1.9
LSO2	YGR169C-A	RSA3	Q05942	220 aa	Known RBP	3.21	□□□□□ -1.9
LSO2	YGR169C-A	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
LSO2	YGR169C-A	YPL260W	Q08977	551 aa		3.21	□□□□□ -1.9
LSO2	YGR169C-A	DBP5	P20449	482 aa	Known RBP	3.2	□□□□□ -1.9
LSO2	YGR169C-A	AGP1	P25376	633 aa		3.2	□□□□□ -1.9
LSO2	YGR169C-A	NAM7	P30771	971 aa	Known RBP	3.2	□□□□□ -1.9
LSO2	YGR169C-A	SNF7	P39929	240 aa	Known RBP	3.2	□□□□□ -1.9
LSO2	YGR169C-A	RPN3	P40016	523 aa	Known RBP	3.2	□□□□□ -1.9
LSO2	YGR169C-A	YJL049W	P47048	450 aa		3.2	□□□□□ -1.9
LSO2	YGR169C-A	NNF1	P47149	201 aa		3.2	□□□□□ -1.9
LSO2	YGR169C-A	FAA4	P47912	694 aa	Known RBP	3.2	□□□□□ -1.9
LSO2	YGR169C-A	TYW3	P53177	273 aa		3.2	□□□□□ -1.9
LSO2	YGR169C-A	ALD6	P54115	500 aa	Known RBP	3.2	□□□□□ -1.9
LSO2	YGR169C-A	GDE1	Q02979	1223 aa		3.2	□□□□□ -1.9
LSO2	YGR169C-A	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
LSO2	YGR169C-A	YLR257W	Q06146	321 aa	Known RBP	3.2	□□□□□ -1.9
LSO2	YGR169C-A	OPI10	Q08202	246 aa		3.2	□□□□□ -1.9
LSO2	YGR169C-A	HRK1	Q08732	759 aa	Known RBP	3.2	□□□□□ -1.9
LSO2	YGR169C-A	PTC5	Q12511	572 aa		3.2	□□□□□ -1.9
LSO2	YGR169C-A	COQ2	P32378	372 aa		3.19	□□□□□ -1.9
LSO2	YGR169C-A	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
LSO2	YGR169C-A	KAE1	P36132	386 aa		3.19	□□□□□ -1.9
LSO2	YGR169C-A	ALG3	P38179	458 aa		3.19	□□□□□ -1.9
LSO2	YGR169C-A	VAC8	P39968	578 aa		3.19	□□□□□ -1.9
LSO2	YGR169C-A	MPH1	P40562	993 aa		3.19	□□□□□ -1.9
LSO2	YGR169C-A	MMM1	P41800	426 aa		3.19	□□□□□ -1.9
LSO2	YGR169C-A	CIT3	P43635	486 aa		3.19	□□□□□ -1.9
LSO2	YGR169C-A	HNT2	P49775	206 aa		3.19	□□□□□ -1.9
LSO2	YGR169C-A	RAT1	Q02792	1006 aa	Known RBP	3.19	□□□□□ -1.9
LSO2	YGR169C-A	TIF35	Q04067	274 aa	Known RBP	3.19	□□□□□ -1.9
LSO2	YGR169C-A	SHE9	Q04172	456 aa		3.19	□□□□□ -1.9
LSO2	YGR169C-A	SPO20	Q04359	397 aa		3.19	□□□□□ -1.9
LSO2	YGR169C-A	PUS7	Q08647	676 aa	Known RBP	3.19	□□□□□ -1.9
LSO2	YGR169C-A	RKM4	Q12504	494 aa		3.19	□□□□□ -1.9
LSO2	YGR169C-A	TRP2	P00899	507 aa	Known RBP	3.18	□□□□□ -1.9
LSO2	YGR169C-A	CHS2	P14180	963 aa		3.18	□□□□□ -1.9
LSO2	YGR169C-A	SRO9	P25567	434 aa	Known RBP	3.18	□□□□□ -1.9
LSO2	YGR169C-A	SBA1	P28707	216 aa	Known RBP	3.18	□□□□□ -1.9
LSO2	YGR169C-A	KIP1	P28742	1111 aa		3.18	□□□□□ -1.9
LSO2	YGR169C-A	SCT1	P32784	759 aa		3.18	□□□□□ -1.9
LSO2	YGR169C-A	BAP2	P38084	609 aa		3.18	□□□□□ -1.9
LSO2	YGR169C-A	LSB3	P43603	459 aa	Known RBP	3.18	□□□□□ -1.9
LSO2	YGR169C-A	YNR063W	P53749	607 aa		3.18	□□□□□ -1.9
LSO2	YGR169C-A	RCM1	P53972	490 aa		3.18	□□□□□ -1.9
LSO2	YGR169C-A	HOS3	Q02959	697 aa	Known RBP	3.18	□□□□□ -1.9
LSO2	YGR169C-A	MCA1	Q08601	432 aa		3.18	□□□□□ -1.9
LSO2	YGR169C-A	WRS1	Q12109	432 aa	Known RBP	3.18	□□□□□ -1.9
LSO2	YGR169C-A	YLR122C	Q12312	125 aa		3.18	□□□□□ -1.9
LSO2	YGR169C-A	YVC1	Q12324	675 aa		3.18	□□□□□ -1.9
LSO2	YGR169C-A	DED1	P06634	604 aa	Known RBP	3.17	□□□□□ -1.9
LSO2	YGR169C-A	MLS1	P30952	554 aa		3.17	□□□□□ -1.9
LSO2	YGR169C-A	YSC84	P32793	468 aa		3.17	□□□□□ -1.9
LSO2	YGR169C-A	MDL2	P33311	773 aa		3.17	□□□□□ -1.9
LSO2	YGR169C-A	OCA5	P38738	679 aa		3.17	□□□□□ -1.9
LSO2	YGR169C-A	SPF1	P39986	1215 aa	Known RBP	3.17	□□□□□ -1.9
LSO2	YGR169C-A	TPP1	Q03796	238 aa		3.17	□□□□□ -1.9
LSO2	YGR169C-A	GNT1	Q12096	491 aa		3.17	□□□□□ -1.9
LSO2	YGR169C-A	INO1	P11986	533 aa		3.16	□□□□□ -1.9
LSO2	YGR169C-A	SAM35	P14693	329 aa		3.16	□□□□□ -1.9
LSO2	YGR169C-A	BAS1	P22035	811 aa		3.16	□□□□□ -1.9
LSO2	YGR169C-A	GRX1	P25373	110 aa	Known RBP	3.16	□□□□□ -1.9
LSO2	YGR169C-A	WHI3	P34761	661 aa	Known RBP	3.16	□□□□□ -1.9
LSO2	YGR169C-A	TAT2	P38967	592 aa		3.16	□□□□□ -1.9
LSO2	YGR169C-A	PNT1	P38969	423 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms