RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W TY1B-ER1Q03612 1755 aa5.27□□□□□ -1.57
PRE9YGR135W TY1B-ML1Q04711 1755 aaKnown RBP5.27□□□□□ -1.57
PRE9YGR135W TY1B-GR2Q12269 1755 aa5.27□□□□□ -1.57
PRE9YGR135W TY1B-OLQ12273 1755 aa5.27□□□□□ -1.57
PRE9YGR135W TY1B-PLQ12414 1755 aaKnown RBP5.27□□□□□ -1.57
PRE9YGR135W YCK2P23292 546 aaKnown RBP5.27□□□□□ -1.57
PRE9YGR135W ALG14P38242 237 aa5.27□□□□□ -1.57
PRE9YGR135W MSH4P40965 878 aaPredicted RBP5.27□□□□□ -1.57
PRE9YGR135W FAA4P47912 694 aaKnown RBP5.27□□□□□ -1.57
PRE9YGR135W NAN1Q02931 896 aaKnown RBP5.27□□□□□ -1.57
PRE9YGR135W TOS4Q06266 489 aa5.27□□□□□ -1.57
PRE9YGR135W TY3B-IQ7LHG5 1498 aaKnown RBP5.26□□□□□ -1.57
PRE9YGR135W ARO1P08566 1588 aaKnown RBP5.26□□□□□ -1.57
PRE9YGR135W HXK1P04806 485 aaKnown RBP5.26□□□□□ -1.57
PRE9YGR135W PRE9P23638 258 aaKnown RBP5.26□□□□□ -1.57
PRE9YGR135W VMA3P25515 160 aa5.26□□□□□ -1.57
PRE9YGR135W GRX4P32642 244 aa5.26□□□□□ -1.57
PRE9YGR135W SWE1P32944 819 aa5.26□□□□□ -1.57
PRE9YGR135W PGM2P37012 569 aaKnown RBP5.26□□□□□ -1.57
PRE9YGR135W HXT8P40886 569 aa5.26□□□□□ -1.57
PRE9YGR135W UTP14Q04500 899 aaKnown RBP5.26□□□□□ -1.57
PRE9YGR135W YOR296WQ08748 1289 aa5.26□□□□□ -1.57
PRE9YGR135W PHO8P11491 566 aa5.25□□□□□ -1.57
PRE9YGR135W TIM23P32897 222 aa5.25□□□□□ -1.57
PRE9YGR135W KTR2P33550 425 aa5.25□□□□□ -1.57
PRE9YGR135W TAT1P38085 619 aa5.25□□□□□ -1.57
PRE9YGR135W LDH1P38139 375 aa5.25□□□□□ -1.57
PRE9YGR135W FUN12P39730 1002 aaKnown RBP5.25□□□□□ -1.57
PRE9YGR135W YER156CP40093 338 aaKnown RBP5.25□□□□□ -1.57
PRE9YGR135W YGL081WP53156 320 aa5.25□□□□□ -1.57
PRE9YGR135W YNR040WP53736 256 aa5.25□□□□□ -1.57
PRE9YGR135W PDS5Q04264 1277 aa5.25□□□□□ -1.57
PRE9YGR135W INP54Q08227 384 aaKnown RBP5.25□□□□□ -1.57
PRE9YGR135W MCD1Q12158 566 aa5.25□□□□□ -1.57
PRE9YGR135W TY1B-BRQ12193 1756 aa5.24□□□□□ -1.57
PRE9YGR135W TY1B-GR3Q12316 1755 aa5.24□□□□□ -1.57
PRE9YGR135W TY1B-ORQ92393 1755 aa5.24□□□□□ -1.57
PRE9YGR135W PDR12Q02785 1511 aa5.24□□□□□ -1.57
PRE9YGR135W CDC34P14682 295 aa5.24□□□□□ -1.57
PRE9YGR135W IDI1P15496 288 aa5.24□□□□□ -1.57
PRE9YGR135W NAR1P23503 491 aaKnown RBP5.24□□□□□ -1.57
PRE9YGR135W GIP1P38229 639 aa5.24□□□□□ -1.57
PRE9YGR135W RAD55P38953 406 aa5.24□□□□□ -1.57
PRE9YGR135W FIR1P40020 876 aa5.24□□□□□ -1.57
PRE9YGR135W YFR016CP43597 1233 aaKnown RBP5.24□□□□□ -1.57
PRE9YGR135W ITC1P53125 1264 aa5.24□□□□□ -1.57
PRE9YGR135W GIS4Q04233 774 aa5.24□□□□□ -1.57
PRE9YGR135W OPI10Q08202 246 aa5.24□□□□□ -1.57
PRE9YGR135W YOL057WQ08225 711 aa5.24□□□□□ -1.57
PRE9YGR135W FAL1Q12099 399 aaKnown RBP5.24□□□□□ -1.57
PRE9YGR135W YLR125WQ12138 136 aa5.24□□□□□ -1.57
PRE9YGR135W SBP1P10080 294 aaKnown RBP5.23□□□□□ -1.57
PRE9YGR135W THI4P32318 326 aa5.23□□□□□ -1.57
PRE9YGR135W NAB2P32505 525 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
PRE9YGR135W GRX7P38068 203 aa5.23□□□□□ -1.57
PRE9YGR135W TAT2P38967 592 aa5.23□□□□□ -1.57
PRE9YGR135W SLN1P39928 1220 aaPredicted RBP5.23□□□□□ -1.57
PRE9YGR135W YEN1P40028 759 aa5.23□□□□□ -1.57
PRE9YGR135W TYW3P53177 273 aa5.23□□□□□ -1.57
PRE9YGR135W RSC4Q02206 625 aa5.23□□□□□ -1.57
PRE9YGR135W BUD21Q08492 214 aaPredicted RBP5.23□□□□□ -1.57
PRE9YGR135W IQG1Q12280 1495 aa5.23□□□□□ -1.57
PRE9YGR135W CDC25P04821 1589 aa5.22□□□□□ -1.57
PRE9YGR135W SRM1P21827 482 aa5.22□□□□□ -1.57
PRE9YGR135W PRP40P33203 583 aaKnown RBP5.22□□□□□ -1.57
PRE9YGR135W ISW1P38144 1129 aa5.22□□□□□ -1.57
PRE9YGR135W BSD2P38356 321 aa5.22□□□□□ -1.57
PRE9YGR135W SPF1P39986 1215 aaKnown RBP5.22□□□□□ -1.57
PRE9YGR135W CHZ1P40019 153 aaPredicted RBP5.22□□□□□ -1.57
PRE9YGR135W EAF7P53911 425 aaKnown RBP5.22□□□□□ -1.57
PRE9YGR135W YCS4Q06156 1176 aa5.22□□□□□ -1.57
PRE9YGR135W RSC2Q06488 889 aa5.22□□□□□ -1.57
PRE9YGR135W MMS1Q06211 1407 aa5.22□□□□□ -1.57
PRE9YGR135W RPP0P05317 312 aaKnown RBP5.21□□□□□ -1.58
PRE9YGR135W KAR2P16474 682 aaKnown RBP5.21□□□□□ -1.58
PRE9YGR135W BAS1P22035 811 aa5.21□□□□□ -1.58
PRE9YGR135W AMN1P38285 549 aaPredicted RBP5.21□□□□□ -1.58
PRE9YGR135W CRP1P38845 465 aaKnown RBP5.21□□□□□ -1.58
PRE9YGR135W UBP12P39538 1254 aa5.21□□□□□ -1.58
PRE9YGR135W TPM2P40414 161 aa5.21□□□□□ -1.58
PRE9YGR135W YIR014WP40570 242 aa5.21□□□□□ -1.58
PRE9YGR135W PRY1P47032 299 aa5.21□□□□□ -1.58
PRE9YGR135W TCB2P48231 1178 aa5.21□□□□□ -1.58
PRE9YGR135W CDC45Q08032 650 aa5.21□□□□□ -1.58
PRE9YGR135W SLP1Q12232 587 aa5.21□□□□□ -1.58
PRE9YGR135W TY1B-JR2P47100 1755 aaKnown RBP5.2□□□□□ -1.58
PRE9YGR135W TY1B-ER2Q03619 1755 aa5.2□□□□□ -1.58
PRE9YGR135W TY1B-MR1Q04214 1755 aa5.2□□□□□ -1.58
PRE9YGR135W TY1B-MR2Q04670 1755 aaKnown RBP5.2□□□□□ -1.58
PRE9YGR135W TY1B-LR1Q12088 1755 aaKnown RBP5.2□□□□□ -1.58
PRE9YGR135W TY1B-NL1Q12112 1755 aa5.2□□□□□ -1.58
PRE9YGR135W TY1B-GR1Q12141 1755 aa5.2□□□□□ -1.58
PRE9YGR135W TY1B-BLQ12490 1755 aa5.2□□□□□ -1.58
PRE9YGR135W YKL069WP36088 180 aa5.2□□□□□ -1.58
PRE9YGR135W PAF1P38351 445 aa5.2□□□□□ -1.58
PRE9YGR135W YBR287WP38355 427 aa5.2□□□□□ -1.58
PRE9YGR135W YGR125WP53273 1036 aa5.2□□□□□ -1.58
PRE9YGR135W PPM2Q08282 695 aa5.2□□□□□ -1.58
PRE9YGR135W MCA1Q08601 432 aa5.2□□□□□ -1.58
PRE9YGR135W FLC1Q08967 793 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms