RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W GCD1P09032 578 aaPredicted RBP5.21□□□□□ -1.58
VMA21YGR105W PRE9P23638 258 aaKnown RBP5.21□□□□□ -1.58
VMA21YGR105W LIP5P32875 414 aa5.21□□□□□ -1.58
VMA21YGR105W SMY2P32909 740 aaKnown RBP5.21□□□□□ -1.58
VMA21YGR105W CTH1P47976 325 aa5.21□□□□□ -1.58
VMA21YGR105W ALT1P52893 592 aa5.21□□□□□ -1.58
VMA21YGR105W RCM1P53972 490 aa5.21□□□□□ -1.58
VMA21YGR105W MCD1Q12158 566 aa5.21□□□□□ -1.58
VMA21YGR105W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
VMA21YGR105W SEC23P15303 768 aaKnown RBP5.2□□□□□ -1.58
VMA21YGR105W NNK1P36003 928 aa5.2□□□□□ -1.58
VMA21YGR105W ATG14P38270 344 aa5.2□□□□□ -1.58
VMA21YGR105W NMD3P38861 518 aaKnown RBP5.2□□□□□ -1.58
VMA21YGR105W SDH1Q00711 640 aa5.2□□□□□ -1.58
VMA21YGR105W BRE4Q07660 1125 aa5.2□□□□□ -1.58
VMA21YGR105W RET1P22276 1149 aaKnown RBP5.19□□□□□ -1.58
VMA21YGR105W PUB1P32588 453 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
VMA21YGR105W OYE2Q03558 400 aaKnown RBP5.19□□□□□ -1.58
VMA21YGR105W DED1P06634 604 aaKnown RBP5.18□□□□□ -1.58
VMA21YGR105W PEP7P32609 515 aa5.18□□□□□ -1.58
VMA21YGR105W ADD66P36040 267 aa5.18□□□□□ -1.58
VMA21YGR105W SEA4P38164 1038 aa5.18□□□□□ -1.58
VMA21YGR105W OYE3P41816 400 aaPredicted RBP5.18□□□□□ -1.58
VMA21YGR105W YLR257WQ06146 321 aaKnown RBP5.18□□□□□ -1.58
VMA21YGR105W EST2Q06163 884 aa5.18□□□□□ -1.58
VMA21YGR105W MAG2Q06436 670 aaKnown RBP5.18□□□□□ -1.58
VMA21YGR105W YOR059CQ08448 450 aaKnown RBP5.18□□□□□ -1.58
VMA21YGR105W LAP2Q10740 671 aa5.18□□□□□ -1.58
VMA21YGR105W ASF1P32447 279 aa5.17□□□□□ -1.58
VMA21YGR105W TPP1Q03796 238 aa5.17□□□□□ -1.58
VMA21YGR105W RSA3Q05942 220 aaKnown RBP5.17□□□□□ -1.58
VMA21YGR105W HDA2Q06629 674 aa5.17□□□□□ -1.58
VMA21YGR105W PUS7Q08647 676 aaKnown RBP5.17□□□□□ -1.58
VMA21YGR105W YVC1Q12324 675 aa5.17□□□□□ -1.58
VMA21YGR105W NSI1Q12457 570 aa5.17□□□□□ -1.58
VMA21YGR105W HSE1P38753 452 aa5.16□□□□□ -1.58
VMA21YGR105W GCR1P07261 785 aa5.15□□□□□ -1.59
VMA21YGR105W AFG2P32794 780 aa5.15□□□□□ -1.59
VMA21YGR105W ROD1Q02805 837 aa5.15□□□□□ -1.59
VMA21YGR105W RKM2Q03942 479 aa5.15□□□□□ -1.59
VMA21YGR105W QNS1P38795 714 aaKnown RBP5.14□□□□□ -1.59
VMA21YGR105W PEX7P39108 375 aa5.14□□□□□ -1.59
VMA21YGR105W ESF1Q06344 628 aaKnown RBP5.14□□□□□ -1.59
VMA21YGR105W MRL1Q06815 381 aa5.14□□□□□ -1.59
VMA21YGR105W TRE1Q08919 783 aa5.14□□□□□ -1.59
VMA21YGR105W SSY1Q03770 852 aa5.13□□□□□ -1.59
VMA21YGR105W TAF13P11747 167 aa5.12□□□□□ -1.59
VMA21YGR105W PRO1P32264 428 aa5.12□□□□□ -1.59
VMA21YGR105W YJL045WP47052 634 aa5.12□□□□□ -1.59
VMA21YGR105W GNP1P48813 663 aa5.12□□□□□ -1.59
VMA21YGR105W RAT1Q02792 1006 aaKnown RBP5.12□□□□□ -1.59
VMA21YGR105W HRK1Q08732 759 aaKnown RBP5.12□□□□□ -1.59
VMA21YGR105W PTC5Q12511 572 aa5.12□□□□□ -1.59
VMA21YGR105W ALG3P38179 458 aa5.11□□□□□ -1.59
VMA21YGR105W PTC7P38797 343 aa5.11□□□□□ -1.59
VMA21YGR105W HXT13P39924 564 aa5.11□□□□□ -1.59
VMA21YGR105W GTS1P40956 396 aa5.11□□□□□ -1.59
VMA21YGR105W VPS53P47061 822 aa5.11□□□□□ -1.59
VMA21YGR105W HXT17P53631 564 aa5.11□□□□□ -1.59
VMA21YGR105W SIW14P53965 281 aa5.11□□□□□ -1.59
VMA21YGR105W HXT15P54854 567 aa5.11□□□□□ -1.59
VMA21YGR105W ADP1P25371 1049 aa5.1□□□□□ -1.59
VMA21YGR105W KIP1P28742 1111 aa5.1□□□□□ -1.59
VMA21YGR105W MKK2P32491 506 aa5.1□□□□□ -1.59
VMA21YGR105W YHL012WP38709 493 aa5.1□□□□□ -1.59
VMA21YGR105W SAM35P14693 329 aa5.09□□□□□ -1.59
VMA21YGR105W HSP78P33416 811 aa5.09□□□□□ -1.59
VMA21YGR105W LRG1P35688 1017 aa5.09□□□□□ -1.59
VMA21YGR105W POL12P38121 705 aaPredicted RBP5.09□□□□□ -1.59
VMA21YGR105W GPB2P39717 880 aa5.09□□□□□ -1.59
VMA21YGR105W RMD1Q03441 430 aa5.09□□□□□ -1.59
VMA21YGR105W AVT1P47082 602 aa5.08□□□□□ -1.6
VMA21YGR105W RTT10Q08924 1013 aa5.08□□□□□ -1.6
VMA21YGR105W SYP1P25623 870 aaKnown RBP5.07□□□□□ -1.6
VMA21YGR105W YSC84P32793 468 aa5.07□□□□□ -1.6
VMA21YGR105W PET112P33893 541 aa5.07□□□□□ -1.6
VMA21YGR105W ENT3P47160 408 aa5.07□□□□□ -1.6
VMA21YGR105W LPX1Q12405 387 aaKnown RBP5.07□□□□□ -1.6
VMA21YGR105W RAD27P26793 382 aa5.06□□□□□ -1.6
VMA21YGR105W MDL2P33311 773 aa5.06□□□□□ -1.6
VMA21YGR105W DUT1P33317 147 aa5.06□□□□□ -1.6
VMA21YGR105W RER2P35196 286 aa5.06□□□□□ -1.6
VMA21YGR105W RCL1Q08096 367 aaPredicted RBP5.06□□□□□ -1.6
VMA21YGR105W SPO21Q12411 609 aa5.06□□□□□ -1.6
VMA21YGR105W DFG16Q99234 619 aa5.06□□□□□ -1.6
VMA21YGR105W MLS1P30952 554 aa5.05□□□□□ -1.6
VMA21YGR105W SEG2P34250 1132 aa5.05□□□□□ -1.6
VMA21YGR105W CDC34P14682 295 aa5.04□□□□□ -1.6
VMA21YGR105W DBP5P20449 482 aaKnown RBP5.04□□□□□ -1.6
VMA21YGR105W AIM26P32858 118 aa5.04□□□□□ -1.6
VMA21YGR105W CNN1P43618 361 aa5.04□□□□□ -1.6
VMA21YGR105W ORC3P54790 616 aa5.04□□□□□ -1.6
VMA21YGR105W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
VMA21YGR105W HOS3Q02959 697 aaKnown RBP5.04□□□□□ -1.6
VMA21YGR105W YPL260WQ08977 551 aa5.04□□□□□ -1.6
VMA21YGR105W YER152CP10356 443 aa5.03□□□□□ -1.6
VMA21YGR105W SRO9P25567 434 aaKnown RBP5.03□□□□□ -1.6
VMA21YGR105W RGD1P38339 666 aa5.03□□□□□ -1.6
VMA21YGR105W TNA1P53322 534 aa5.03□□□□□ -1.6
VMA21YGR105W TIF35Q04067 274 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms