RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W YAF9P53930 226 aa1.3□□□□□ -2.2
CSE1YGL238W DUS4Q06063 367 aa1.3□□□□□ -2.2
CSE1YGL238W YLR257WQ06146 321 aaKnown RBP1.3□□□□□ -2.2
CSE1YGL238W PMT7Q06644 662 aa1.3□□□□□ -2.2
CSE1YGL238W YOR352WQ08816 343 aa1.3□□□□□ -2.2
CSE1YGL238W RIB2Q12362 591 aaKnown RBP1.3□□□□□ -2.2
CSE1YGL238W RAD53P22216 821 aa1.3□□□□□ -2.2
CSE1YGL238W DOM34P33309 386 aa1.3□□□□□ -2.2
CSE1YGL238W NEM1P38757 446 aa1.3□□□□□ -2.2
CSE1YGL238W NMD3P38861 518 aaKnown RBP1.3□□□□□ -2.2
CSE1YGL238W HNT2P49775 206 aa1.3□□□□□ -2.2
CSE1YGL238W TOS4Q06266 489 aa1.3□□□□□ -2.2
CSE1YGL238W RCL1Q08096 367 aaPredicted RBP1.3□□□□□ -2.2
CSE1YGL238W HCM1P25364 564 aa1.29□□□□□ -2.2
CSE1YGL238W YAR028WP39548 234 aa1.29□□□□□ -2.2
CSE1YGL238W URN1Q06525 465 aaKnown RBP1.29□□□□□ -2.2
CSE1YGL238W RSC58Q07979 502 aa1.29□□□□□ -2.2
CSE1YGL238W SPS1P08458 490 aa1.29□□□□□ -2.2
CSE1YGL238W LEO1P38439 464 aa1.29□□□□□ -2.2
CSE1YGL238W CHS7P38843 316 aa1.29□□□□□ -2.2
CSE1YGL238W UFD2P54860 961 aa1.29□□□□□ -2.2
CSE1YGL238W CDC55Q00362 526 aa1.29□□□□□ -2.2
CSE1YGL238W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
CSE1YGL238W HRK1Q08732 759 aaKnown RBP1.29□□□□□ -2.2
CSE1YGL238W NTO1Q12311 748 aa1.29□□□□□ -2.2
CSE1YGL238W PUF4P25339 888 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
CSE1YGL238W MCM5P29496 775 aaKnown RBP1.29□□□□□ -2.2
CSE1YGL238W PMI40P29952 429 aaKnown RBP1.29□□□□□ -2.2
CSE1YGL238W RVS167P39743 482 aaKnown RBP1.29□□□□□ -2.2
CSE1YGL238W MNN10P50108 393 aaKnown RBP1.29□□□□□ -2.2
CSE1YGL238W YNL011CP53980 444 aa1.29□□□□□ -2.2
CSE1YGL238W RSA3Q05942 220 aaKnown RBP1.29□□□□□ -2.2
CSE1YGL238W STE11P23561 717 aa1.28□□□□□ -2.2
CSE1YGL238W AFG2P32794 780 aa1.28□□□□□ -2.2
CSE1YGL238W HSE1P38753 452 aa1.28□□□□□ -2.2
CSE1YGL238W ATG1P53104 897 aa1.28□□□□□ -2.2
CSE1YGL238W LAP2Q10740 671 aa1.28□□□□□ -2.2
CSE1YGL238W FRT1Q99332 602 aa1.28□□□□□ -2.2
CSE1YGL238W CYC1P00044 109 aaPredicted RBP1.28□□□□□ -2.2
CSE1YGL238W LST4P34239 828 aa1.28□□□□□ -2.2
CSE1YGL238W SHU2P38957 223 aa1.28□□□□□ -2.2
CSE1YGL238W AIM21P40563 679 aa1.28□□□□□ -2.2
CSE1YGL238W MDJ2P42834 146 aa1.28□□□□□ -2.2
CSE1YGL238W DMA2P53924 522 aa1.28□□□□□ -2.2
CSE1YGL238W PLB2Q03674 706 aa1.28□□□□□ -2.2
CSE1YGL238W ROT1Q03691 256 aa1.28□□□□□ -2.2
CSE1YGL238W TRS120Q04183 1289 aa1.28□□□□□ -2.2
CSE1YGL238W SUB2Q07478 446 aaKnown RBP1.28□□□□□ -2.2
CSE1YGL238W NBA1Q08229 501 aaKnown RBP1.28□□□□□ -2.2
CSE1YGL238W SNF5P18480 905 aa1.27□□□□□ -2.21
CSE1YGL238W CDC20P26309 610 aa1.27□□□□□ -2.21
CSE1YGL238W YSC84P32793 468 aa1.27□□□□□ -2.21
CSE1YGL238W SEC26P41810 973 aaKnown RBP1.27□□□□□ -2.21
CSE1YGL238W MTR4P47047 1073 aaKnown RBP1.27□□□□□ -2.21
CSE1YGL238W YJL045WP47052 634 aa1.27□□□□□ -2.21
CSE1YGL238W ACF4P47129 309 aa1.27□□□□□ -2.21
CSE1YGL238W MCM6P53091 1017 aaKnown RBP1.27□□□□□ -2.21
CSE1YGL238W UTP5Q04177 643 aaKnown RBP1.27□□□□□ -2.21
CSE1YGL238W BSC2Q05611 235 aa1.27□□□□□ -2.21
CSE1YGL238W UGA4P32837 571 aa1.27□□□□□ -2.21
CSE1YGL238W QNS1P38795 714 aaKnown RBP1.27□□□□□ -2.21
CSE1YGL238W QDR1P40475 563 aa1.27□□□□□ -2.21
CSE1YGL238W GNP1P48813 663 aa1.27□□□□□ -2.21
CSE1YGL238W PHO23P50947 330 aa1.27□□□□□ -2.21
CSE1YGL238W RXT3Q07458 294 aa1.27□□□□□ -2.21
CSE1YGL238W SSA4P22202 642 aaKnown RBP1.26□□□□□ -2.21
CSE1YGL238W HXT13P39924 564 aa1.26□□□□□ -2.21
CSE1YGL238W SNM1P40993 198 aa1.26□□□□□ -2.21
CSE1YGL238W BUL1P48524 976 aa1.26□□□□□ -2.21
CSE1YGL238W HXT17P53631 564 aa1.26□□□□□ -2.21
CSE1YGL238W HXT15P54854 567 aa1.26□□□□□ -2.21
CSE1YGL238W ACK1Q07622 623 aaPredicted RBP1.26□□□□□ -2.21
CSE1YGL238W PMA1P05030 918 aaKnown RBP1.26□□□□□ -2.21
CSE1YGL238W INP54Q08227 384 aaKnown RBP1.26□□□□□ -2.21
CSE1YGL238W DCG1P32460 244 aa1.26□□□□□ -2.21
CSE1YGL238W DEF1P35732 738 aaKnown RBP1.26□□□□□ -2.21
CSE1YGL238W GLO3P38682 493 aaKnown RBP1.26□□□□□ -2.21
CSE1YGL238W XKS1P42826 600 aa1.26□□□□□ -2.21
CSE1YGL238W MON1P53129 644 aa1.26□□□□□ -2.21
CSE1YGL238W TMA10Q06177 86 aa1.26□□□□□ -2.21
CSE1YGL238W PPM2Q08282 695 aa1.26□□□□□ -2.21
CSE1YGL238W GPB1Q08886 897 aa1.26□□□□□ -2.21
CSE1YGL238W COQ4O13525 335 aa1.25□□□□□ -2.21
CSE1YGL238W SEC23P15303 768 aaKnown RBP1.25□□□□□ -2.21
CSE1YGL238W VPS53P47061 822 aa1.25□□□□□ -2.21
CSE1YGL238W PBP1P53297 722 aaKnown RBP1.25□□□□□ -2.21
CSE1YGL238W KIN4Q01919 800 aa1.25□□□□□ -2.21
CSE1YGL238W GAL10P04397 699 aa1.25□□□□□ -2.21
CSE1YGL238W PHO4P07270 312 aaKnown RBP1.25□□□□□ -2.21
CSE1YGL238W VMA4P22203 233 aaKnown RBP1.25□□□□□ -2.21
CSE1YGL238W MSH3P25336 1018 aa1.25□□□□□ -2.21
CSE1YGL238W OAR1P35731 278 aa1.25□□□□□ -2.21
CSE1YGL238W CCZ1P38273 704 aa1.25□□□□□ -2.21
CSE1YGL238W MSS4P38994 779 aa1.25□□□□□ -2.21
CSE1YGL238W YNR063WP53749 607 aa1.25□□□□□ -2.21
CSE1YGL238W RKM2Q03942 479 aa1.25□□□□□ -2.21
CSE1YGL238W RSM24Q03976 319 aa1.25□□□□□ -2.21
CSE1YGL238W SIZ1Q04195 904 aa1.25□□□□□ -2.21
CSE1YGL238W RSB1Q08417 382 aa1.25□□□□□ -2.21
CSE1YGL238W SPO21Q12411 609 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms