RNA–Protein interactions for RNA: YFL040W

YFL040W, Transcript of Putative transporter, yeast

Gene YFL040W, Length 1,623 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YFL040W	YFL040W	AI3	P03877	415 aa		5.71	□□□□□ -1.5
YFL040W	YFL040W	MKK2	P32491	506 aa		5.71	□□□□□ -1.5
YFL040W	YFL040W	OCA5	P38738	679 aa		5.71	□□□□□ -1.5
YFL040W	YFL040W	PRY1	P47032	299 aa		5.71	□□□□□ -1.5
YFL040W	YFL040W	YGR045C	P53229	120 aa		5.71	□□□□□ -1.5
YFL040W	YFL040W	RKM2	Q03942	479 aa		5.71	□□□□□ -1.5
YFL040W	YFL040W	DOT1	Q04089	582 aa	Known RBP	5.71	□□□□□ -1.5
YFL040W	YFL040W	WRS1	Q12109	432 aa	Known RBP	5.71	□□□□□ -1.5
YFL040W	YFL040W	YAR028W	P39548	234 aa		5.7	□□□□□ -1.5
YFL040W	YFL040W	NNF1	P47149	201 aa		5.7	□□□□□ -1.5
YFL040W	YFL040W	LAP2	Q10740	671 aa		5.7	□□□□□ -1.5
YFL040W	YFL040W	RSC6	P25632	483 aa		5.7	□□□□□ -1.5
YFL040W	YFL040W	TYW3	P53177	273 aa		5.7	□□□□□ -1.5
YFL040W	YFL040W	ELA1	P53861	379 aa	Predicted RBP	5.7	□□□□□ -1.5
YFL040W	YFL040W	YMR187C	Q03236	431 aa		5.7	□□□□□ -1.5
YFL040W	YFL040W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
YFL040W	YFL040W	SSF2	Q12153	453 aa	Predicted RBP	5.7	□□□□□ -1.5
YFL040W	YFL040W	RAT1	Q02792	1006 aa	Known RBP	5.69	□□□□□ -1.5
YFL040W	YFL040W	OPI10	Q08202	246 aa		5.69	□□□□□ -1.5
YFL040W	YFL040W	YDR215C	Q12240	137 aa		5.69	□□□□□ -1.5
YFL040W	YFL040W	TRP2	P00899	507 aa	Known RBP	5.68	□□□□□ -1.5
YFL040W	YFL040W	PRI2	P20457	528 aa		5.68	□□□□□ -1.5
YFL040W	YFL040W	YCK2	P23292	546 aa	Known RBP	5.68	□□□□□ -1.5
YFL040W	YFL040W	SYP1	P25623	870 aa	Known RBP	5.68	□□□□□ -1.5
YFL040W	YFL040W	AFG2	P32794	780 aa		5.68	□□□□□ -1.5
YFL040W	YFL040W	GPT2	P36148	743 aa		5.68	□□□□□ -1.5
YFL040W	YFL040W	SLN1	P39928	1220 aa	Predicted RBP	5.68	□□□□□ -1.5
YFL040W	YFL040W	ICP55	P40051	511 aa		5.68	□□□□□ -1.5
YFL040W	YFL040W	FAL1	Q12099	399 aa	Known RBP	5.68	□□□□□ -1.5
YFL040W	YFL040W	PHM7	Q12252	991 aa		5.68	□□□□□ -1.5
YFL040W	YFL040W	LYP1	P32487	611 aa		5.67	□□□□□ -1.5
YFL040W	YFL040W	HSE1	P38753	452 aa		5.67	□□□□□ -1.5
YFL040W	YFL040W	ARI1	P53111	347 aa	Known RBP	5.67	□□□□□ -1.5
YFL040W	YFL040W	BAS1	P22035	811 aa		5.66	□□□□□ -1.5
YFL040W	YFL040W	PTC5	Q12511	572 aa		5.66	□□□□□ -1.5
YFL040W	YFL040W	YPR053C	Q6Q5F3	151 aa		5.66	□□□□□ -1.5
YFL040W	YFL040W	YKL069W	P36088	180 aa		5.66	□□□□□ -1.5
YFL040W	YFL040W	TAT1	P38085	619 aa		5.66	□□□□□ -1.5
YFL040W	YFL040W	ALG3	P38179	458 aa		5.66	□□□□□ -1.5
YFL040W	YFL040W	MSH4	P40965	878 aa	Predicted RBP	5.66	□□□□□ -1.5
YFL040W	YFL040W	CNN1	P43618	361 aa		5.66	□□□□□ -1.5
YFL040W	YFL040W	TIF35	Q04067	274 aa	Known RBP	5.66	□□□□□ -1.5
YFL040W	YFL040W	SPO20	Q04359	397 aa		5.66	□□□□□ -1.5
YFL040W	YFL040W	RET1	P22276	1149 aa	Known RBP	5.65	□□□□□ -1.51
YFL040W	YFL040W	GRX1	P25373	110 aa	Known RBP	5.65	□□□□□ -1.51
YFL040W	YFL040W	SMY2	P32909	740 aa	Known RBP	5.65	□□□□□ -1.51
YFL040W	YFL040W	NNK1	P36003	928 aa		5.65	□□□□□ -1.51
YFL040W	YFL040W	SKN7	P38889	622 aa		5.65	□□□□□ -1.51
YFL040W	YFL040W	VPS53	P47061	822 aa		5.65	□□□□□ -1.51
YFL040W	YFL040W	DBP5	P20449	482 aa	Known RBP	5.64	□□□□□ -1.51
YFL040W	YFL040W	NFS1	P25374	497 aa		5.64	□□□□□ -1.51
YFL040W	YFL040W	QNS1	P38795	714 aa	Known RBP	5.64	□□□□□ -1.51
YFL040W	YFL040W	RSA3	Q05942	220 aa	Known RBP	5.64	□□□□□ -1.51
YFL040W	YFL040W	YLR225C	Q05948	407 aa	Known RBP	5.64	□□□□□ -1.51
YFL040W	YFL040W	GIC2	Q06648	383 aa		5.64	□□□□□ -1.51
YFL040W	YFL040W	INO1	P11986	533 aa		5.63	□□□□□ -1.51
YFL040W	YFL040W	SPF1	P39986	1215 aa	Known RBP	5.63	□□□□□ -1.51
YFL040W	YFL040W	KRI1	P42846	591 aa	Known RBP	5.63	□□□□□ -1.51
YFL040W	YFL040W	YLR257W	Q06146	321 aa	Known RBP	5.63	□□□□□ -1.51
YFL040W	YFL040W	TDA5	Q06417	326 aa	Known RBP	5.63	□□□□□ -1.51
YFL040W	YFL040W	AOS1	Q06624	347 aa		5.63	□□□□□ -1.51
YFL040W	YFL040W	NAM7	P30771	971 aa	Known RBP	5.63	□□□□□ -1.51
YFL040W	YFL040W	ABD1	P32783	436 aa	Predicted RBP	5.63	□□□□□ -1.51
YFL040W	YFL040W	MOT2	P34909	587 aa	Known RBP	5.63	□□□□□ -1.51
YFL040W	YFL040W	SEA4	P38164	1038 aa		5.63	□□□□□ -1.51
YFL040W	YFL040W	YJL049W	P47048	450 aa		5.63	□□□□□ -1.51
YFL040W	YFL040W	ESC2	Q06340	456 aa		5.63	□□□□□ -1.51
YFL040W	YFL040W	RPS4A	P0CX35	261 aa	Known RBP	5.62	□□□□□ -1.51
YFL040W	YFL040W	RPS4B	P0CX36	261 aa	Known RBP	5.62	□□□□□ -1.51
YFL040W	YFL040W	AGP1	P25376	633 aa		5.62	□□□□□ -1.51
YFL040W	YFL040W	MLS1	P30952	554 aa		5.62	□□□□□ -1.51
YFL040W	YFL040W	MCM7	P38132	845 aa		5.62	□□□□□ -1.51
YFL040W	YFL040W	RGD1	P38339	666 aa		5.62	□□□□□ -1.51
YFL040W	YFL040W	TAT2	P38967	592 aa		5.62	□□□□□ -1.51
YFL040W	YFL040W	AKR1	P39010	764 aa		5.62	□□□□□ -1.51
YFL040W	YFL040W	MPH1	P40562	993 aa		5.62	□□□□□ -1.51
YFL040W	YFL040W	ALT1	P52893	592 aa		5.62	□□□□□ -1.51
YFL040W	YFL040W	MCA1	Q08601	432 aa		5.62	□□□□□ -1.51
YFL040W	YFL040W	PUS1	Q12211	544 aa	Known RBP	5.62	□□□□□ -1.51
YFL040W	YFL040W	YOL098C	Q12496	1037 aa		5.62	□□□□□ -1.51
YFL040W	YFL040W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.61	□□□□□ -1.51	not detected
YFL040W	YFL040W	KIP1	P28742	1111 aa		5.61	□□□□□ -1.51
YFL040W	YFL040W	NMD3	P38861	518 aa	Known RBP	5.61	□□□□□ -1.51
YFL040W	YFL040W	RKM4	Q12504	494 aa		5.61	□□□□□ -1.51
YFL040W	YFL040W	SBA1	P28707	216 aa	Known RBP	5.6	□□□□□ -1.51
YFL040W	YFL040W	HNT2	P49775	206 aa		5.6	□□□□□ -1.51
YFL040W	YFL040W	SHE9	Q04172	456 aa		5.6	□□□□□ -1.51
YFL040W	YFL040W	YPL260W	Q08977	551 aa		5.6	□□□□□ -1.51
YFL040W	YFL040W	YKL107W	P34251	309 aa		5.59	□□□□□ -1.51
YFL040W	YFL040W	VBA5	P36172	582 aa		5.59	□□□□□ -1.51
YFL040W	YFL040W	YGL176C	P46945	554 aa		5.59	□□□□□ -1.51
YFL040W	YFL040W	YPL034W	Q03083	165 aa		5.59	□□□□□ -1.51
YFL040W	YFL040W	TPP1	Q03796	238 aa		5.59	□□□□□ -1.51
YFL040W	YFL040W	HRK1	Q08732	759 aa	Known RBP	5.59	□□□□□ -1.51
YFL040W	YFL040W	YPL066W	Q12194	479 aa		5.59	□□□□□ -1.51
YFL040W	YFL040W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.52	not detected
YFL040W	YFL040W	SAF1	P38352	637 aa		5.59	□□□□□ -1.52
YFL040W	YFL040W	MMM1	P41800	426 aa		5.59	□□□□□ -1.52
YFL040W	YFL040W	NAN1	Q02931	896 aa	Known RBP	5.59	□□□□□ -1.52
YFL040W	YFL040W	EAR1	Q03212	550 aa		5.59	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 98.1 ms