RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	YOR296W	Q08748	1289 aa		5.63	□□□□□ -1.51
UBC8	YEL012W	FAS2	P19097	1887 aa	Known RBP	5.62	□□□□□ -1.51
UBC8	YEL012W	CDC19	P00549	500 aa	Known RBP	5.62	□□□□□ -1.51
UBC8	YEL012W	SMY1	P32364	656 aa	Known RBP	5.62	□□□□□ -1.51
UBC8	YEL012W	GCD6	P32501	712 aa	Known RBP	5.62	□□□□□ -1.51
UBC8	YEL012W	YBP2	P53169	641 aa		5.62	□□□□□ -1.51
UBC8	YEL012W	CUS1	Q02554	436 aa	Predicted RBP	5.62	□□□□□ -1.51
UBC8	YEL012W	BSC2	Q05611	235 aa		5.62	□□□□□ -1.51
UBC8	YEL012W	PMD1	P32634	1753 aa		5.62	□□□□□ -1.51
UBC8	YEL012W	THS1	P04801	734 aa	Known RBP	5.61	□□□□□ -1.51
UBC8	YEL012W	SEC3	P33332	1336 aa	Known RBP	5.61	□□□□□ -1.51
UBC8	YEL012W	ISW1	P38144	1129 aa		5.61	□□□□□ -1.51
UBC8	YEL012W	GIP1	P38229	639 aa		5.61	□□□□□ -1.51
UBC8	YEL012W	RRT14	P40470	206 aa		5.61	□□□□□ -1.51
UBC8	YEL012W	UBP15	P50101	1230 aa		5.61	□□□□□ -1.51
UBC8	YEL012W	SAM37	P50110	327 aa		5.61	□□□□□ -1.51
UBC8	YEL012W	CTR9	P89105	1077 aa		5.61	□□□□□ -1.51
UBC8	YEL012W	YLR278C	Q05854	1341 aa		5.61	□□□□□ -1.51
UBC8	YEL012W	NUP145	P49687	1317 aa		5.6	□□□□□ -1.51
UBC8	YEL012W	RGP1	P16664	663 aa		5.6	□□□□□ -1.51
UBC8	YEL012W	FIR1	P40020	876 aa		5.6	□□□□□ -1.51
UBC8	YEL012W	ITC1	P53125	1264 aa		5.6	□□□□□ -1.51
UBC8	YEL012W	YLR346C	Q06139	101 aa		5.6	□□□□□ -1.51
UBC8	YEL012W	EMG1	Q06287	252 aa	Known RBP	5.6	□□□□□ -1.51
UBC8	YEL012W	NOC3	Q07896	663 aa	Predicted RBP	5.6	□□□□□ -1.51
UBC8	YEL012W	NYV1	Q12255	253 aa		5.6	□□□□□ -1.51
UBC8	YEL012W	FLP1	P03870	423 aa		5.59	□□□□□ -1.51
UBC8	YEL012W	CAF20	P12962	161 aa	Known RBP	5.59	□□□□□ -1.51
UBC8	YEL012W	ICL1	P28240	557 aa	Predicted RBP	5.59	□□□□□ -1.51
UBC8	YEL012W	CIC1	P38779	376 aa	Known RBP	5.59	□□□□□ -1.51
UBC8	YEL012W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
UBC8	YEL012W	YNR040W	P53736	256 aa		5.59	□□□□□ -1.51
UBC8	YEL012W	DUS1	P53759	423 aa	Known RBP	5.59	□□□□□ -1.51
UBC8	YEL012W	OPT2	Q06593	877 aa		5.59	□□□□□ -1.51
UBC8	YEL012W	UTP10	P42945	1769 aa	Known RBP	5.59	□□□□□ -1.51
UBC8	YEL012W	HXK1	P04806	485 aa	Known RBP	5.58	□□□□□ -1.52
UBC8	YEL012W	DUR3	P33413	735 aa		5.58	□□□□□ -1.52
UBC8	YEL012W	FAA3	P39002	694 aa		5.58	□□□□□ -1.52
UBC8	YEL012W	RPS26A	P39938	119 aa	Known RBP	5.58	□□□□□ -1.52
UBC8	YEL012W	RPS26B	P39939	119 aa	Known RBP	5.58	□□□□□ -1.52
UBC8	YEL012W	YGR122W	P53272	402 aa		5.58	□□□□□ -1.52
UBC8	YEL012W	NAM8	Q00539	523 aa	Known RBP	5.58	□□□□□ -1.52
UBC8	YEL012W	MAG2	Q06436	670 aa	Known RBP	5.58	□□□□□ -1.52
UBC8	YEL012W	CYC8	P14922	966 aa		5.57	□□□□□ -1.52
UBC8	YEL012W	ETP1	P38748	585 aa	Known RBP	5.57	□□□□□ -1.52
UBC8	YEL012W	YIL165C	P40446	119 aa		5.57	□□□□□ -1.52
UBC8	YEL012W	CAF120	P53836	1060 aa		5.57	□□□□□ -1.52
UBC8	YEL012W	RET1	P22276	1149 aa	Known RBP	5.56	□□□□□ -1.52
UBC8	YEL012W	HSP104	P31539	908 aa	Known RBP	5.56	□□□□□ -1.52
UBC8	YEL012W	GLY1	P37303	387 aa	Known RBP	5.56	□□□□□ -1.52
UBC8	YEL012W	PFF1	P38244	976 aa		5.56	□□□□□ -1.52
UBC8	YEL012W	AIM46	P38885	310 aa		5.56	□□□□□ -1.52
UBC8	YEL012W	ACO2	P39533	789 aa		5.56	□□□□□ -1.52
UBC8	YEL012W	UBP2	Q01476	1272 aa		5.56	□□□□□ -1.52
UBC8	YEL012W	RMD1	Q03441	430 aa		5.56	□□□□□ -1.52
UBC8	YEL012W	JIP5	Q06214	492 aa	Predicted RBP	5.56	□□□□□ -1.52
UBC8	YEL012W	PYC2	P32327	1180 aa	Known RBP	5.55	□□□□□ -1.52
UBC8	YEL012W	MRPL16	P38064	232 aa		5.55	□□□□□ -1.52
UBC8	YEL012W	APM2	P38700	605 aa		5.55	□□□□□ -1.52
UBC8	YEL012W	OSH7	P38755	437 aa		5.55	□□□□□ -1.52
UBC8	YEL012W	TAP42	Q04372	366 aa		5.55	□□□□□ -1.52
UBC8	YEL012W	YCS4	Q06156	1176 aa		5.55	□□□□□ -1.52
UBC8	YEL012W	TY1A-BL	Q12266	440 aa		5.55	□□□□□ -1.52
UBC8	YEL012W	RAD2	P07276	1031 aa		5.54	□□□□□ -1.52
UBC8	YEL012W	LPD1	P09624	499 aa	Known RBP	5.54	□□□□□ -1.52
UBC8	YEL012W	GRX4	P32642	244 aa		5.54	□□□□□ -1.52
UBC8	YEL012W	UGA4	P32837	571 aa		5.54	□□□□□ -1.52
UBC8	YEL012W	SER1	P33330	395 aa	Known RBP	5.54	□□□□□ -1.52
UBC8	YEL012W	OCA5	P38738	679 aa		5.54	□□□□□ -1.52
UBC8	YEL012W	YHL008C	P38750	627 aa		5.54	□□□□□ -1.52
UBC8	YEL012W	DSD1	P53095	428 aa		5.54	□□□□□ -1.52
UBC8	YEL012W	MSH6	Q03834	1242 aa		5.54	□□□□□ -1.52
UBC8	YEL012W	DAL4	Q04895	635 aa		5.54	□□□□□ -1.52
UBC8	YEL012W	OXR1	Q08952	273 aa		5.54	□□□□□ -1.52
UBC8	YEL012W	YBR287W	P38355	427 aa		5.53	□□□□□ -1.52
UBC8	YEL012W	YGL082W	P53155	381 aa		5.53	□□□□□ -1.52
UBC8	YEL012W	YPL109C	Q02981	657 aa		5.53	□□□□□ -1.52
UBC8	YEL012W	ERO1	Q03103	563 aa		5.53	□□□□□ -1.52
UBC8	YEL012W	VPS16	Q03308	798 aa		5.53	□□□□□ -1.52
UBC8	YEL012W	ESF1	Q06344	628 aa	Known RBP	5.53	□□□□□ -1.52
UBC8	YEL012W	ALE1	Q08548	619 aa		5.53	□□□□□ -1.52
UBC8	YEL012W	FIG2	P25653	1609 aa		5.52	□□□□□ -1.53
UBC8	YEL012W	IDI1	P15496	288 aa		5.52	□□□□□ -1.53
UBC8	YEL012W	MCM5	P29496	775 aa	Known RBP	5.52	□□□□□ -1.53
UBC8	YEL012W	MSC7	P38694	644 aa		5.52	□□□□□ -1.53
UBC8	YEL012W	SCW11	P53189	542 aa		5.52	□□□□□ -1.53
UBC8	YEL012W	RMT2	Q03305	412 aa		5.52	□□□□□ -1.53
UBC8	YEL012W	BDF2	Q07442	638 aa		5.52	□□□□□ -1.53
UBC8	YEL012W	PIN2	Q12057	282 aa		5.52	□□□□□ -1.53
UBC8	YEL012W	POM152	P39685	1337 aa		5.51	□□□□□ -1.53
UBC8	YEL012W	PEP7	P32609	515 aa		5.51	□□□□□ -1.53
UBC8	YEL012W	YKU70	P32807	602 aa		5.51	□□□□□ -1.53
UBC8	YEL012W	RIM11	P38615	370 aa		5.51	□□□□□ -1.53
UBC8	YEL012W	SHC1	P39000	512 aa		5.51	□□□□□ -1.53
UBC8	YEL012W	NUT1	P53114	1132 aa		5.51	□□□□□ -1.53
UBC8	YEL012W	MON1	P53129	644 aa		5.51	□□□□□ -1.53
UBC8	YEL012W	IRC3	Q06683	689 aa		5.51	□□□□□ -1.53
UBC8	YEL012W	CCP1	P00431	361 aa		5.5	□□□□□ -1.53
UBC8	YEL012W	KAR2	P16474	682 aa	Known RBP	5.5	□□□□□ -1.53
UBC8	YEL012W	PRE9	P23638	258 aa	Known RBP	5.5	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms