RNA–Protein interactions for RNA: YDR405W

MRP20, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRP20, Length 792 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRP20	YDR405W	PSK2	Q08217	1101 aa		11.39	□□□□□ -0.59
MRP20	YDR405W	TIM23	P32897	222 aa		11.38	□□□□□ -0.59
MRP20	YDR405W	RXT2	P38255	430 aa		11.38	□□□□□ -0.59
MRP20	YDR405W	YHL017W	P38745	532 aa		11.38	□□□□□ -0.59
MRP20	YDR405W	VPS53	P47061	822 aa		11.38	□□□□□ -0.59
MRP20	YDR405W	VPS62	P53285	467 aa		11.38	□□□□□ -0.59
MRP20	YDR405W	DUS3	Q06053	668 aa	Known RBP	11.38	□□□□□ -0.59
MRP20	YDR405W	PIB1	Q06651	286 aa		11.38	□□□□□ -0.59
MRP20	YDR405W	CBP3	P21560	335 aa		11.37	□□□□□ -0.59
MRP20	YDR405W	TKL1	P23254	680 aa	Known RBP	11.37	□□□□□ -0.59
MRP20	YDR405W	UGA4	P32837	571 aa		11.37	□□□□□ -0.59
MRP20	YDR405W	SLD5	Q03406	294 aa		11.37	□□□□□ -0.59
MRP20	YDR405W	MSC6	Q08818	692 aa	Known RBP	11.37	□□□□□ -0.59
MRP20	YDR405W	ERP3	Q12403	225 aa		11.37	□□□□□ -0.59
MRP20	YDR405W	MET6	P05694	767 aa	Known RBP	11.36	□□□□□ -0.59
MRP20	YDR405W	ASF1	P32447	279 aa		11.36	□□□□□ -0.59
MRP20	YDR405W	TFC4	P33339	1025 aa		11.36	□□□□□ -0.59
MRP20	YDR405W	SHP1	P34223	423 aa		11.36	□□□□□ -0.59
MRP20	YDR405W	MAC1	P35192	417 aa		11.36	□□□□□ -0.59
MRP20	YDR405W	LDH1	P38139	375 aa		11.36	□□□□□ -0.59
MRP20	YDR405W	PAN5	P38787	379 aa		11.36	□□□□□ -0.59
MRP20	YDR405W	YJR107W	P47145	328 aa		11.36	□□□□□ -0.59
MRP20	YDR405W	YLR407W	Q06070	228 aa		11.36	□□□□□ -0.59
MRP20	YDR405W	SUT2	Q12286	268 aa		11.36	□□□□□ -0.59
MRP20	YDR405W	CEX1	Q12453	761 aa		11.36	□□□□□ -0.59
MRP20	YDR405W	YOR131C	Q12486	218 aa		11.36	□□□□□ -0.59
MRP20	YDR405W	MAK11	P20484	414 aa	Known RBP	11.35	□□□□□ -0.59
MRP20	YDR405W	SWI4	P25302	1093 aa	Known RBP	11.35	□□□□□ -0.59
MRP20	YDR405W	PCI8	P40512	444 aa		11.35	□□□□□ -0.59
MRP20	YDR405W	ASE1	P50275	885 aa		11.35	□□□□□ -0.59
MRP20	YDR405W	PTA1	Q01329	785 aa	Predicted RBP	11.35	□□□□□ -0.59
MRP20	YDR405W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.34	□□□□□ -0.59	not detected
MRP20	YDR405W	SES1	P07284	462 aa	Known RBP	11.34	□□□□□ -0.59
MRP20	YDR405W	SRO9	P25567	434 aa	Known RBP	11.34	□□□□□ -0.59
MRP20	YDR405W	BUD6	P41697	788 aa		11.34	□□□□□ -0.59
MRP20	YDR405W	EPL1	P43572	832 aa		11.34	□□□□□ -0.59
MRP20	YDR405W	PRY3	P47033	881 aa		11.34	□□□□□ -0.59
MRP20	YDR405W	YGL138C	P53122	345 aa		11.34	□□□□□ -0.59
MRP20	YDR405W	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.33	□□□□□ -0.6	not detected
MRP20	YDR405W	SAS3	P34218	831 aa		11.33	□□□□□ -0.6
MRP20	YDR405W	PAM1	P37304	830 aa	Known RBP	11.33	□□□□□ -0.6
MRP20	YDR405W	REG2	P38232	338 aa		11.33	□□□□□ -0.6
MRP20	YDR405W	NDT80	P38830	627 aa		11.33	□□□□□ -0.6
MRP20	YDR405W	RPN10	P38886	268 aa	Known RBP	11.33	□□□□□ -0.6
MRP20	YDR405W	TSR3	Q12094	313 aa	Known RBP	11.33	□□□□□ -0.6
MRP20	YDR405W	MDM20	Q12387	796 aa	Known RBP	11.33	□□□□□ -0.6
MRP20	YDR405W	TRM11	Q12463	433 aa		11.33	□□□□□ -0.6
MRP20	YDR405W	RKM4	Q12504	494 aa		11.33	□□□□□ -0.6
MRP20	YDR405W	HCA4	P20448	770 aa	Known RBP	11.32	□□□□□ -0.6
MRP20	YDR405W	YUR1	P26725	428 aa		11.32	□□□□□ -0.6
MRP20	YDR405W	TTI1	P36097	1038 aa		11.32	□□□□□ -0.6
MRP20	YDR405W	DBP7	P36120	742 aa	Known RBP	11.32	□□□□□ -0.6
MRP20	YDR405W	KSP1	P38691	1029 aa	Known RBP	11.32	□□□□□ -0.6
MRP20	YDR405W	BNI5	P53890	448 aa	Known RBP	11.32	□□□□□ -0.6
MRP20	YDR405W	NAF1	P53919	492 aa	Known RBP	11.32	□□□□□ -0.6
MRP20	YDR405W	YLR326W	Q06170	240 aa	Known RBP	11.32	□□□□□ -0.6
MRP20	YDR405W	RPL19A	P0CX82	189 aa	Known RBP	11.31	□□□□□ -0.6
MRP20	YDR405W	RPL19B	P0CX83	189 aa	Predicted RBP	11.31	□□□□□ -0.6
MRP20	YDR405W	SUL1	P38359	859 aa		11.31	□□□□□ -0.6
MRP20	YDR405W	RET3	P53600	189 aa		11.31	□□□□□ -0.6
MRP20	YDR405W	BRE5	P53741	515 aa	Known RBP	11.31	□□□□□ -0.6
MRP20	YDR405W	OYE2	Q03558	400 aa	Known RBP	11.31	□□□□□ -0.6
MRP20	YDR405W	CSM3	Q04659	317 aa		11.31	□□□□□ -0.6
MRP20	YDR405W	POX1	P13711	748 aa		11.3	□□□□□ -0.6
MRP20	YDR405W	GPT2	P36148	743 aa		11.3	□□□□□ -0.6
MRP20	YDR405W	HMF1	P40037	129 aa	Known RBP	11.3	□□□□□ -0.6
MRP20	YDR405W	CTF18	P49956	741 aa		11.3	□□□□□ -0.6
MRP20	YDR405W	HUL5	P53119	910 aa		11.3	□□□□□ -0.6
MRP20	YDR405W	FAR11	P53917	953 aa		11.3	□□□□□ -0.6
MRP20	YDR405W	FMP30	Q02883	468 aa		11.3	□□□□□ -0.6
MRP20	YDR405W	ECM30	Q06673	1274 aa		11.3	□□□□□ -0.6
MRP20	YDR405W	ARP6	Q12509	438 aa		11.3	□□□□□ -0.6
MRP20	YDR405W	DBP1	P24784	617 aa	Known RBP	11.29	□□□□□ -0.6
MRP20	YDR405W	BCS1	P32839	456 aa		11.29	□□□□□ -0.6
MRP20	YDR405W	NOC2	P39744	710 aa	Known RBP	11.29	□□□□□ -0.6
MRP20	YDR405W	YFL040W	P43562	540 aa		11.29	□□□□□ -0.6
MRP20	YDR405W	YMR321C	Q04898	105 aa		11.29	□□□□□ -0.6
MRP20	YDR405W	ELG1	Q12050	791 aa		11.29	□□□□□ -0.6
MRP20	YDR405W	PDC1	P06169	563 aa	Known RBP	11.28	□□□□□ -0.6
MRP20	YDR405W	CLB5	P30283	435 aa		11.28	□□□□□ -0.6
MRP20	YDR405W	UIP5	P36137	443 aa		11.28	□□□□□ -0.6
MRP20	YDR405W	AFG3	P39925	761 aa		11.28	□□□□□ -0.6
MRP20	YDR405W	YGL039W	P53183	348 aa	Known RBP	11.28	□□□□□ -0.6
MRP20	YDR405W	GIS4	Q04233	774 aa		11.28	□□□□□ -0.6
MRP20	YDR405W	SMD2	Q06217	110 aa	Known RBP	11.28	□□□□□ -0.6
MRP20	YDR405W	OXR1	Q08952	273 aa		11.28	□□□□□ -0.6
MRP20	YDR405W	SKP2	P42843	763 aa		11.27	□□□□□ -0.61
MRP20	YDR405W	CNM67	P53865	581 aa	Known RBP	11.27	□□□□□ -0.61
MRP20	YDR405W	YPL150W	Q12152	901 aa		11.27	□□□□□ -0.61
MRP20	YDR405W	TIP41	Q12199	356 aa		11.27	□□□□□ -0.61
MRP20	YDR405W	RLF2	Q12495	606 aa		11.27	□□□□□ -0.61
MRP20	YDR405W	HSP82	P02829	709 aa	Known RBP	11.26	□□□□□ -0.61
MRP20	YDR405W	CDC6	P09119	513 aa		11.26	□□□□□ -0.61
MRP20	YDR405W	THR4	P16120	514 aa	Known RBP	11.26	□□□□□ -0.61
MRP20	YDR405W	UBP15	P50101	1230 aa		11.26	□□□□□ -0.61
MRP20	YDR405W	DSE4	P53753	1117 aa		11.26	□□□□□ -0.61
MRP20	YDR405W	EAF7	P53911	425 aa	Known RBP	11.26	□□□□□ -0.61
MRP20	YDR405W	ORC4	P54791	529 aa		11.26	□□□□□ -0.61
MRP20	YDR405W	YPL034W	Q03083	165 aa		11.26	□□□□□ -0.61
MRP20	YDR405W	YML020W	Q03722	664 aa		11.26	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms