RNA–Protein interactions for RNA: YDR083W

RRP8, Transcript of Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase, yeastyeast

Gene RRP8, Length 1,179 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP8YDR083W AI1P03875 834 aa5.93□□□□□ -1.46
RRP8YDR083W GRX1P25373 110 aaKnown RBP5.93□□□□□ -1.46
RRP8YDR083W ATG14P38270 344 aa5.93□□□□□ -1.46
RRP8YDR083W RRM3P38766 723 aa5.93□□□□□ -1.46
RRP8YDR083W BOI2P39969 1040 aa5.93□□□□□ -1.46
RRP8YDR083W SPF1P39986 1215 aaKnown RBP5.93□□□□□ -1.46
RRP8YDR083W DSE4P53753 1117 aa5.93□□□□□ -1.46
RRP8YDR083W RKM2Q03942 479 aa5.93□□□□□ -1.46
RRP8YDR083W YLL054CQ12244 843 aa5.93□□□□□ -1.46
RRP8YDR083W SYP1P25623 870 aaKnown RBP5.92□□□□□ -1.46
RRP8YDR083W TAT2P38967 592 aa5.92□□□□□ -1.46
RRP8YDR083W KIP3P53086 805 aaKnown RBP5.92□□□□□ -1.46
RRP8YDR083W YNR063WP53749 607 aa5.92□□□□□ -1.46
RRP8YDR083W SPO20Q04359 397 aa5.92□□□□□ -1.46
RRP8YDR083W ESC2Q06340 456 aa5.92□□□□□ -1.46
RRP8YDR083W AFG2P32794 780 aa5.91□□□□□ -1.46
RRP8YDR083W MOT2P34909 587 aaKnown RBP5.91□□□□□ -1.46
RRP8YDR083W SEA4P38164 1038 aa5.91□□□□□ -1.46
RRP8YDR083W YAR028WP39548 234 aa5.91□□□□□ -1.46
RRP8YDR083W TIF35Q04067 274 aaKnown RBP5.91□□□□□ -1.46
RRP8YDR083W NSE3Q05541 303 aa5.91□□□□□ -1.46
RRP8YDR083W FPR4Q06205 392 aaPredicted RBP5.91□□□□□ -1.46
RRP8YDR083W YOR223WQ12015 292 aa5.91□□□□□ -1.46
RRP8YDR083W DBP5P20449 482 aaKnown RBP5.9□□□□□ -1.46
RRP8YDR083W SRP40P32583 406 aaPredicted RBP5.9□□□□□ -1.46
RRP8YDR083W ABD1P32783 436 aaPredicted RBP5.9□□□□□ -1.46
RRP8YDR083W NAN1Q02931 896 aaKnown RBP5.9□□□□□ -1.46
RRP8YDR083W AOS1Q06624 347 aa5.9□□□□□ -1.46
RRP8YDR083W AVO1Q08236 1176 aa5.9□□□□□ -1.46
RRP8YDR083W INO1P11986 533 aa5.89□□□□□ -1.47
RRP8YDR083W RAD4P14736 754 aa5.89□□□□□ -1.47
RRP8YDR083W AGP1P25376 633 aa5.89□□□□□ -1.47
RRP8YDR083W YKL091CP33324 310 aaKnown RBP5.89□□□□□ -1.47
RRP8YDR083W ALG3P38179 458 aa5.89□□□□□ -1.47
RRP8YDR083W CNN1P43618 361 aa5.89□□□□□ -1.47
RRP8YDR083W YGR045CP53229 120 aa5.89□□□□□ -1.47
RRP8YDR083W ELA1P53861 379 aaPredicted RBP5.89□□□□□ -1.47
RRP8YDR083W DOT1Q04089 582 aaKnown RBP5.89□□□□□ -1.47
RRP8YDR083W YLR225CQ05948 407 aaKnown RBP5.89□□□□□ -1.47
RRP8YDR083W BDF2Q07442 638 aa5.89□□□□□ -1.47
RRP8YDR083W GAS5Q08193 484 aa5.89□□□□□ -1.47
RRP8YDR083W LAP2Q10740 671 aa5.89□□□□□ -1.47
RRP8YDR083W CDC53Q12018 815 aaKnown RBP5.89□□□□□ -1.47
RRP8YDR083W TY1A-NL1Q12391 440 aaKnown RBP5.89□□□□□ -1.47
RRP8YDR083W MCM7P38132 845 aa5.88□□□□□ -1.47
RRP8YDR083W KRI1P42846 591 aaKnown RBP5.88□□□□□ -1.47
RRP8YDR083W TDA6Q06466 467 aa5.88□□□□□ -1.47
RRP8YDR083W STI1P15705 589 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
RRP8YDR083W PUF4P25339 888 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47 RIP-Chip
RRP8YDR083W SBA1P28707 216 aaKnown RBP5.87□□□□□ -1.47
RRP8YDR083W HSE1P38753 452 aa5.87□□□□□ -1.47
RRP8YDR083W TIM54P47045 478 aa5.87□□□□□ -1.47
RRP8YDR083W THI72Q08579 599 aa5.87□□□□□ -1.47
RRP8YDR083W YPL066WQ12194 479 aa5.87□□□□□ -1.47
RRP8YDR083W RKM4Q12504 494 aa5.87□□□□□ -1.47
RRP8YDR083W PTC5Q12511 572 aa5.87□□□□□ -1.47
RRP8YDR083W STE5P32917 917 aa5.86□□□□□ -1.47
RRP8YDR083W YFL066CP43538 392 aa5.86□□□□□ -1.47
RRP8YDR083W HNT2P49775 206 aa5.86□□□□□ -1.47
RRP8YDR083W BUD9P53226 547 aa5.86□□□□□ -1.47
RRP8YDR083W NCE103P53615 221 aa5.86□□□□□ -1.47
RRP8YDR083W SHE9Q04172 456 aa5.86□□□□□ -1.47
RRP8YDR083W SFA1P32771 386 aa5.85□□□□□ -1.47
RRP8YDR083W YKL107WP34251 309 aa5.85□□□□□ -1.47
RRP8YDR083W MRP8P35719 219 aa5.85□□□□□ -1.47
RRP8YDR083W GPT2P36148 743 aa5.85□□□□□ -1.47
RRP8YDR083W VBA5P36172 582 aa5.85□□□□□ -1.47
RRP8YDR083W MCX1P38323 520 aaPredicted RBP5.85□□□□□ -1.47
RRP8YDR083W RGD1P38339 666 aa5.85□□□□□ -1.47
RRP8YDR083W MPH1P40562 993 aa5.85□□□□□ -1.47
RRP8YDR083W VPS53P47061 822 aa5.85□□□□□ -1.47
RRP8YDR083W HUL5P53119 910 aa5.85□□□□□ -1.47
RRP8YDR083W NSG2P53898 299 aa5.85□□□□□ -1.47
RRP8YDR083W RSA3Q05942 220 aaKnown RBP5.85□□□□□ -1.47
RRP8YDR083W AI3P03877 415 aa5.84□□□□□ -1.47
RRP8YDR083W MLS1P30952 554 aa5.84□□□□□ -1.47
RRP8YDR083W YBR184WP38299 523 aa5.84□□□□□ -1.47
RRP8YDR083W MSH4P40965 878 aaPredicted RBP5.84□□□□□ -1.47
RRP8YDR083W LSB3P43603 459 aaKnown RBP5.84□□□□□ -1.47
RRP8YDR083W YGL176CP46945 554 aa5.84□□□□□ -1.47
RRP8YDR083W RPN4Q03465 531 aa5.84□□□□□ -1.47
RRP8YDR083W YOR131CQ12486 218 aa5.84□□□□□ -1.47
RRP8YDR083W NFS1P25374 497 aa5.83□□□□□ -1.48
RRP8YDR083W SMY2P32909 740 aaKnown RBP5.83□□□□□ -1.48
RRP8YDR083W NNK1P36003 928 aa5.83□□□□□ -1.48
RRP8YDR083W PBP2P38151 413 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
RRP8YDR083W QNS1P38795 714 aaKnown RBP5.83□□□□□ -1.48
RRP8YDR083W PRY1P47032 299 aa5.83□□□□□ -1.48
RRP8YDR083W YLR257WQ06146 321 aaKnown RBP5.83□□□□□ -1.48
RRP8YDR083W RSC6P25632 483 aa5.82□□□□□ -1.48
RRP8YDR083W YHR020WP38708 688 aaKnown RBP5.82□□□□□ -1.48
RRP8YDR083W IRR1P40541 1150 aa5.82□□□□□ -1.48
RRP8YDR083W GNT1Q12096 491 aa5.82□□□□□ -1.48
RRP8YDR083W YDR215CQ12240 137 aa5.82□□□□□ -1.48
RRP8YDR083W CIT2P08679 460 aa5.81□□□□□ -1.48
RRP8YDR083W RET1P22276 1149 aaKnown RBP5.81□□□□□ -1.48
RRP8YDR083W KIP1P28742 1111 aa5.81□□□□□ -1.48
RRP8YDR083W PIN4P34217 668 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
RRP8YDR083W MDJ1P35191 511 aa5.81□□□□□ -1.48
RRP8YDR083W PBY1P38254 753 aa5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms