RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
CDC36YDL165W GCN5Q03330 439 aa3.69□□□□□ -1.82
CDC36YDL165W HRK1Q08732 759 aaKnown RBP3.69□□□□□ -1.82
CDC36YDL165W SHU2P38957 223 aa3.68□□□□□ -1.82
CDC36YDL165W MEF2P39677 819 aa3.68□□□□□ -1.82
CDC36YDL165W CDC55Q00362 526 aa3.68□□□□□ -1.82
CDC36YDL165W SGD1Q06132 899 aa3.68□□□□□ -1.82
CDC36YDL165W INP54Q08227 384 aaKnown RBP3.68□□□□□ -1.82
CDC36YDL165W MTR4P47047 1073 aaKnown RBP3.67□□□□□ -1.82
CDC36YDL165W YJL045WP47052 634 aa3.67□□□□□ -1.82
CDC36YDL165W MSE1P48525 536 aa3.67□□□□□ -1.82
CDC36YDL165W ENV11P53246 860 aa3.67□□□□□ -1.82
CDC36YDL165W UTP5Q04177 643 aaKnown RBP3.67□□□□□ -1.82
CDC36YDL165W TRS120Q04183 1289 aa3.67□□□□□ -1.82
CDC36YDL165W RSC58Q07979 502 aa3.67□□□□□ -1.82
CDC36YDL165W YOR352WQ08816 343 aa3.67□□□□□ -1.82
CDC36YDL165W SPS1P08458 490 aa3.66□□□□□ -1.82
CDC36YDL165W HSE1P38753 452 aa3.66□□□□□ -1.82
CDC36YDL165W KAR5Q04746 504 aa3.66□□□□□ -1.82
CDC36YDL165W XKS1P42826 600 aa3.65□□□□□ -1.83
CDC36YDL165W ACF4P47129 309 aa3.65□□□□□ -1.83
CDC36YDL165W ATG1P53104 897 aa3.65□□□□□ -1.83
CDC36YDL165W NOG1Q02892 647 aaKnown RBP3.65□□□□□ -1.83
CDC36YDL165W LAP2Q10740 671 aa3.65□□□□□ -1.83
CDC36YDL165W SUN4P53616 420 aa3.64□□□□□ -1.83
CDC36YDL165W YML122CQ03207 126 aa3.64□□□□□ -1.83
CDC36YDL165W CYC1P00044 109 aaPredicted RBP3.63□□□□□ -1.83
CDC36YDL165W HCM1P25364 564 aa3.63□□□□□ -1.83
CDC36YDL165W YSC84P32793 468 aa3.63□□□□□ -1.83
CDC36YDL165W QNS1P38795 714 aaKnown RBP3.63□□□□□ -1.83
CDC36YDL165W YNR063WP53749 607 aa3.63□□□□□ -1.83
CDC36YDL165W PLB2Q03674 706 aa3.63□□□□□ -1.83
CDC36YDL165W ROT1Q03691 256 aa3.63□□□□□ -1.83
CDC36YDL165W DUS4Q06063 367 aa3.63□□□□□ -1.83
CDC36YDL165W RCL1Q08096 367 aaPredicted RBP3.63□□□□□ -1.83
CDC36YDL165W NBA1Q08229 501 aaKnown RBP3.63□□□□□ -1.83
CDC36YDL165W PUF4P25339 888 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
CDC36YDL165W DOM34P33309 386 aa3.62□□□□□ -1.83
CDC36YDL165W HNT2P49775 206 aa3.62□□□□□ -1.83
CDC36YDL165W MSH3P25336 1018 aa3.61□□□□□ -1.83
CDC36YDL165W LEO1P38439 464 aa3.61□□□□□ -1.83
CDC36YDL165W SEC26P41810 973 aaKnown RBP3.6□□□□□ -1.83
CDC36YDL165W CTF4Q01454 927 aa3.6□□□□□ -1.83
CDC36YDL165W NOC3Q07896 663 aaPredicted RBP3.6□□□□□ -1.83
CDC36YDL165W COQ4O13525 335 aa3.59□□□□□ -1.83
CDC36YDL165W RAD53P22216 821 aa3.59□□□□□ -1.83
CDC36YDL165W CDC20P26309 610 aa3.59□□□□□ -1.83
CDC36YDL165W LST4P34239 828 aa3.59□□□□□ -1.83
CDC36YDL165W ATG14P38270 344 aa3.59□□□□□ -1.83
CDC36YDL165W MNN10P50108 393 aaKnown RBP3.59□□□□□ -1.83
CDC36YDL165W MCM6P53091 1017 aaKnown RBP3.59□□□□□ -1.83
CDC36YDL165W PEX13P80667 386 aa3.59□□□□□ -1.83
CDC36YDL165W YCS4Q06156 1176 aa3.59□□□□□ -1.83
CDC36YDL165W TMA10Q06177 86 aa3.59□□□□□ -1.83
CDC36YDL165W GPI13Q07830 1017 aa3.59□□□□□ -1.83
CDC36YDL165W NTO1Q12311 748 aa3.59□□□□□ -1.83
CDC36YDL165W VMA4P22203 233 aaKnown RBP3.58□□□□□ -1.84
CDC36YDL165W STE11P23561 717 aa3.58□□□□□ -1.84
CDC36YDL165W PMI40P29952 429 aaKnown RBP3.58□□□□□ -1.84
CDC36YDL165W CHS7P38843 316 aa3.58□□□□□ -1.84
CDC36YDL165W AIM21P40563 679 aa3.58□□□□□ -1.84
CDC36YDL165W VPS53P47061 822 aa3.58□□□□□ -1.84
CDC36YDL165W SPO21Q12411 609 aa3.58□□□□□ -1.84
CDC36YDL165W GAL10P04397 699 aa3.57□□□□□ -1.84
CDC36YDL165W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
CDC36YDL165W BAP2P38084 609 aa3.57□□□□□ -1.84
CDC36YDL165W CCZ1P38273 704 aa3.57□□□□□ -1.84
CDC36YDL165W RKM2Q03942 479 aa3.57□□□□□ -1.84
CDC36YDL165W RXT3Q07458 294 aa3.57□□□□□ -1.84
CDC36YDL165W SUB2Q07478 446 aaKnown RBP3.57□□□□□ -1.84
CDC36YDL165W ACK1Q07622 623 aaPredicted RBP3.57□□□□□ -1.84
CDC36YDL165W CDC6P09119 513 aa3.56□□□□□ -1.84
CDC36YDL165W TRL1P09880 827 aaKnown RBP3.56□□□□□ -1.84
CDC36YDL165W SRM1P21827 482 aa3.56□□□□□ -1.84
CDC36YDL165W KIP1P28742 1111 aa3.56□□□□□ -1.84
CDC36YDL165W PHO23P50947 330 aa3.56□□□□□ -1.84
CDC36YDL165W RSB1Q08417 382 aa3.56□□□□□ -1.84
CDC36YDL165W UGA4P32837 571 aa3.55□□□□□ -1.84
CDC36YDL165W ADD66P36040 267 aa3.55□□□□□ -1.84
CDC36YDL165W RDH54P38086 958 aa3.55□□□□□ -1.84
CDC36YDL165W GPB2P39717 880 aa3.55□□□□□ -1.84
CDC36YDL165W SAM37P50110 327 aa3.55□□□□□ -1.84
CDC36YDL165W TNA1P53322 534 aa3.55□□□□□ -1.84
CDC36YDL165W CMP2P14747 604 aa3.54□□□□□ -1.84
CDC36YDL165W SNF5P18480 905 aa3.54□□□□□ -1.84
CDC36YDL165W PIK1P39104 1066 aa3.54□□□□□ -1.84
CDC36YDL165W RSM26P47141 266 aa3.54□□□□□ -1.84
CDC36YDL165W HOS3Q02959 697 aaKnown RBP3.54□□□□□ -1.84
CDC36YDL165W URN1Q06525 465 aaKnown RBP3.54□□□□□ -1.84
CDC36YDL165W GPB1Q08886 897 aa3.54□□□□□ -1.84
CDC36YDL165W FRT1Q99332 602 aa3.54□□□□□ -1.84
CDC36YDL165W AFG2P32794 780 aa3.53□□□□□ -1.84
CDC36YDL165W PRP40P33203 583 aaKnown RBP3.53□□□□□ -1.84
CDC36YDL165W CIC1P38779 376 aaKnown RBP3.53□□□□□ -1.84
CDC36YDL165W PEX28P38848 579 aa3.53□□□□□ -1.84
CDC36YDL165W KIN4Q01919 800 aa3.53□□□□□ -1.84
CDC36YDL165W RSM24Q03976 319 aa3.53□□□□□ -1.84
CDC36YDL165W PMA1P05030 918 aaKnown RBP3.52□□□□□ -1.85
CDC36YDL165W SQT1P35184 431 aa3.52□□□□□ -1.85
CDC36YDL165W GRS1P38088 690 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 71.4 ms