RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeastyeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR2YDL042C SPO20Q04359 397 aa8.18□□□□□ -1.1
SIR2YDL042C SBE2P42223 864 aaKnown RBP8.17□□□□□ -1.1
SIR2YDL042C AVO1Q08236 1176 aa8.17□□□□□ -1.1
SIR2YDL042C SRP40P32583 406 aaPredicted RBP8.16□□□□□ -1.1
SIR2YDL042C SPF1P39986 1215 aaKnown RBP8.16□□□□□ -1.1
SIR2YDL042C KIP3P53086 805 aaKnown RBP8.16□□□□□ -1.1
SIR2YDL042C RAT1Q02792 1006 aaKnown RBP8.16□□□□□ -1.1
SIR2YDL042C SYP1P25623 870 aaKnown RBP8.15□□□□□ -1.1
SIR2YDL042C YAR028WP39548 234 aa8.15□□□□□ -1.1
SIR2YDL042C KRI1P42846 591 aaKnown RBP8.15□□□□□ -1.1
SIR2YDL042C IOC3P43596 787 aa8.15□□□□□ -1.1
SIR2YDL042C LAP2Q10740 671 aa8.15□□□□□ -1.1
SIR2YDL042C YOR223WQ12015 292 aa8.15□□□□□ -1.1
SIR2YDL042C TAT2P38967 592 aa8.14□□□□□ -1.11
SIR2YDL042C YGR045CP53229 120 aa8.14□□□□□ -1.11
SIR2YDL042C NSE3Q05541 303 aa8.14□□□□□ -1.11
SIR2YDL042C FPR4Q06205 392 aaPredicted RBP8.14□□□□□ -1.11
SIR2YDL042C TIF35Q04067 274 aaKnown RBP8.13□□□□□ -1.11
SIR2YDL042C YLR225CQ05948 407 aaKnown RBP8.13□□□□□ -1.11
SIR2YDL042C AGP1P25376 633 aa8.12□□□□□ -1.11
SIR2YDL042C AFG2P32794 780 aa8.12□□□□□ -1.11
SIR2YDL042C CNN1P43618 361 aa8.12□□□□□ -1.11
SIR2YDL042C NAN1Q02931 896 aaKnown RBP8.12□□□□□ -1.11
SIR2YDL042C DOT1Q04089 582 aaKnown RBP8.12□□□□□ -1.11
SIR2YDL042C THI72Q08579 599 aa8.12□□□□□ -1.11
SIR2YDL042C TY1A-NL1Q12391 440 aaKnown RBP8.12□□□□□ -1.11
SIR2YDL042C STI1P15705 589 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
SIR2YDL042C ABD1P32783 436 aaPredicted RBP8.11□□□□□ -1.11
SIR2YDL042C SEA4P38164 1038 aa8.11□□□□□ -1.11
SIR2YDL042C ALG3P38179 458 aa8.11□□□□□ -1.11
SIR2YDL042C HSE1P38753 452 aa8.11□□□□□ -1.11
SIR2YDL042C ELA1P53861 379 aaPredicted RBP8.11□□□□□ -1.11
SIR2YDL042C ESC2Q06340 456 aa8.11□□□□□ -1.11
SIR2YDL042C CDC53Q12018 815 aaKnown RBP8.11□□□□□ -1.11
SIR2YDL042C DBP5P20449 482 aaKnown RBP8.11□□□□□ -1.11
SIR2YDL042C YKL091CP33324 310 aaKnown RBP8.11□□□□□ -1.11
SIR2YDL042C MOT2P34909 587 aaKnown RBP8.11□□□□□ -1.11
SIR2YDL042C GAS5Q08193 484 aa8.11□□□□□ -1.11
SIR2YDL042C PTC5Q12511 572 aa8.11□□□□□ -1.11
SIR2YDL042C INO1P11986 533 aa8.1□□□□□ -1.11
SIR2YDL042C NCE103P53615 221 aa8.1□□□□□ -1.11
SIR2YDL042C YPL062WQ02781 134 aa8.1□□□□□ -1.11
SIR2YDL042C RAD4P14736 754 aa8.09□□□□□ -1.11
SIR2YDL042C SBA1P28707 216 aaKnown RBP8.09□□□□□ -1.11
SIR2YDL042C MCM7P38132 845 aa8.09□□□□□ -1.11
SIR2YDL042C BUD9P53226 547 aa8.09□□□□□ -1.11
SIR2YDL042C TDA6Q06466 467 aa8.09□□□□□ -1.11
SIR2YDL042C AOS1Q06624 347 aa8.09□□□□□ -1.11
SIR2YDL042C BDF2Q07442 638 aa8.09□□□□□ -1.11
SIR2YDL042C YFL066CP43538 392 aa8.08□□□□□ -1.12
SIR2YDL042C VPS53P47061 822 aa8.08□□□□□ -1.12
SIR2YDL042C SHE9Q04172 456 aa8.08□□□□□ -1.12
SIR2YDL042C RKM4Q12504 494 aa8.08□□□□□ -1.12
SIR2YDL042C SFA1P32771 386 aa8.08□□□□□ -1.12
SIR2YDL042C VBA5P36172 582 aa8.08□□□□□ -1.12
SIR2YDL042C HUL5P53119 910 aa8.08□□□□□ -1.12
SIR2YDL042C YOR131CQ12486 218 aa8.08□□□□□ -1.12
SIR2YDL042C PUF4P25339 888 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
SIR2YDL042C GPT2P36148 743 aa8.07□□□□□ -1.12
SIR2YDL042C MCX1P38323 520 aaPredicted RBP8.07□□□□□ -1.12
SIR2YDL042C TIM54P47045 478 aa8.07□□□□□ -1.12
SIR2YDL042C RET1P22276 1149 aaKnown RBP8.06□□□□□ -1.12
SIR2YDL042C YKL107WP34251 309 aa8.06□□□□□ -1.12
SIR2YDL042C MRP8P35719 219 aa8.06□□□□□ -1.12
SIR2YDL042C YBR184WP38299 523 aa8.06□□□□□ -1.12
SIR2YDL042C RGD1P38339 666 aa8.06□□□□□ -1.12
SIR2YDL042C QNS1P38795 714 aaKnown RBP8.06□□□□□ -1.12
SIR2YDL042C MPH1P40562 993 aa8.06□□□□□ -1.12
SIR2YDL042C NSG2P53898 299 aa8.06□□□□□ -1.12
SIR2YDL042C MLS1P30952 554 aa8.05□□□□□ -1.12
SIR2YDL042C STE5P32917 917 aa8.05□□□□□ -1.12
SIR2YDL042C PIN4P34217 668 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
SIR2YDL042C NNK1P36003 928 aa8.05□□□□□ -1.12
SIR2YDL042C SNF7P39929 240 aaKnown RBP8.05□□□□□ -1.12
SIR2YDL042C YGL176CP46945 554 aa8.05□□□□□ -1.12
SIR2YDL042C HNT2P49775 206 aa8.05□□□□□ -1.12
SIR2YDL042C RPN4Q03465 531 aa8.05□□□□□ -1.12
SIR2YDL042C RSA3Q05942 220 aaKnown RBP8.05□□□□□ -1.12
SIR2YDL042C SPO75Q07798 868 aa8.05□□□□□ -1.12
SIR2YDL042C AI3P03877 415 aa8.05□□□□□ -1.12
SIR2YDL042C NFS1P25374 497 aa8.05□□□□□ -1.12
SIR2YDL042C RSC6P25632 483 aa8.05□□□□□ -1.12
SIR2YDL042C MDJ1P35191 511 aa8.05□□□□□ -1.12
SIR2YDL042C IRR1P40541 1150 aa8.05□□□□□ -1.12
SIR2YDL042C MSH4P40965 878 aaPredicted RBP8.05□□□□□ -1.12
SIR2YDL042C YPL066WQ12194 479 aa8.05□□□□□ -1.12
SIR2YDL042C SMY2P32909 740 aaKnown RBP8.04□□□□□ -1.12
SIR2YDL042C PRY1P47032 299 aa8.03□□□□□ -1.12
SIR2YDL042C YLR257WQ06146 321 aaKnown RBP8.03□□□□□ -1.12
SIR2YDL042C OSW7P43611 510 aa8.02□□□□□ -1.13
SIR2YDL042C OSH2Q12451 1283 aa8.02□□□□□ -1.13
SIR2YDL042C PBY1P38254 753 aa8.02□□□□□ -1.13
SIR2YDL042C YPL260WQ08977 551 aa8.02□□□□□ -1.13
SIR2YDL042C GNT1Q12096 491 aa8.02□□□□□ -1.13
SIR2YDL042C KIP1P28742 1111 aa8.01□□□□□ -1.13
SIR2YDL042C SBP1P10080 294 aaKnown RBP8□□□□□ -1.13
SIR2YDL042C PBP2P38151 413 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
SIR2YDL042C YHR020WP38708 688 aaKnown RBP8□□□□□ -1.13
SIR2YDL042C ARI1P53111 347 aaKnown RBP8□□□□□ -1.13
SIR2YDL042C YMR187CQ03236 431 aa8□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms