RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C MRPS35P53292 345 aa6.66□□□□□ -1.34
RGD1YBR260C GTR1Q00582 310 aa6.66□□□□□ -1.34
RGD1YBR260C PLP1Q04004 230 aa6.66□□□□□ -1.34
RGD1YBR260C NOP6Q07623 225 aaKnown RBP6.66□□□□□ -1.34
RGD1YBR260C GNT1Q12096 491 aa6.66□□□□□ -1.34
RGD1YBR260C LPD1P09624 499 aaKnown RBP6.65□□□□□ -1.35
RGD1YBR260C OXP1P28273 1286 aa6.65□□□□□ -1.35
RGD1YBR260C YKT6P36015 200 aaKnown RBP6.65□□□□□ -1.35
RGD1YBR260C AKL1P38080 1108 aaKnown RBP6.65□□□□□ -1.35
RGD1YBR260C SCS2P40075 244 aaKnown RBP6.65□□□□□ -1.35
RGD1YBR260C UBP6P43593 499 aaKnown RBP6.65□□□□□ -1.35
RGD1YBR260C TMA22P47089 198 aaPredicted RBP6.65□□□□□ -1.35
RGD1YBR260C SHE10P53075 577 aa6.65□□□□□ -1.35
RGD1YBR260C YNL144CP53907 740 aa6.65□□□□□ -1.35
RGD1YBR260C MSH6Q03834 1242 aa6.65□□□□□ -1.35
RGD1YBR260C YLR001CQ07895 862 aa6.65□□□□□ -1.35
RGD1YBR260C OSW1Q08692 278 aa6.65□□□□□ -1.35
RGD1YBR260C SUI3P09064 285 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C SCJ1P25303 377 aa6.64□□□□□ -1.35
RGD1YBR260C RPL5P26321 297 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C CPS1P27614 576 aa6.64□□□□□ -1.35
RGD1YBR260C TOA1P32773 286 aa6.64□□□□□ -1.35
RGD1YBR260C KES1P35844 434 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C SHM1P37292 490 aaPredicted RBP6.64□□□□□ -1.35
RGD1YBR260C LIN1P38852 340 aaPredicted RBP6.64□□□□□ -1.35
RGD1YBR260C KAP123P40069 1113 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C ATG3P40344 310 aa6.64□□□□□ -1.35
RGD1YBR260C STB1P42845 420 aa6.64□□□□□ -1.35
RGD1YBR260C HFM1P51979 1187 aa6.64□□□□□ -1.35
RGD1YBR260C ATP25Q03153 612 aa6.64□□□□□ -1.35
RGD1YBR260C GIR2Q03768 265 aaPredicted RBP6.64□□□□□ -1.35
RGD1YBR260C MAG2Q06436 670 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C UTP4Q06679 776 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C SLK19Q08581 821 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C AFT2Q08957 416 aa6.64□□□□□ -1.35
RGD1YBR260C URB1P34241 1764 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C SEC23P15303 768 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C HCA4P20448 770 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C PPH3P32345 308 aa6.64□□□□□ -1.35
RGD1YBR260C SEC8P32855 1065 aa6.64□□□□□ -1.35
RGD1YBR260C PET112P33893 541 aa6.64□□□□□ -1.35
RGD1YBR260C TYS1P36421 394 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C ECM21P38167 1117 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C AXL1P40851 1208 aa6.64□□□□□ -1.35
RGD1YBR260C DSL1P53847 754 aa6.64□□□□□ -1.35
RGD1YBR260C RRP9Q06506 573 aaKnown RBP6.64□□□□□ -1.35
RGD1YBR260C GAS4Q08271 471 aa6.64□□□□□ -1.35
RGD1YBR260C RTP1Q12751 981 aa6.64□□□□□ -1.35
RGD1YBR260C COQ4O13525 335 aa6.63□□□□□ -1.35
RGD1YBR260C NAT1P12945 854 aaKnown RBP6.63□□□□□ -1.35
RGD1YBR260C CDC10P25342 322 aaKnown RBP6.63□□□□□ -1.35
RGD1YBR260C YBR062CP38239 180 aa6.63□□□□□ -1.35
RGD1YBR260C MCX1P38323 520 aaPredicted RBP6.63□□□□□ -1.35
RGD1YBR260C EFM4P40516 257 aa6.63□□□□□ -1.35
RGD1YBR260C YIR042CP40586 236 aa6.63□□□□□ -1.35
RGD1YBR260C MDJ2P42834 146 aa6.63□□□□□ -1.35
RGD1YBR260C TAF1P46677 1066 aa6.63□□□□□ -1.35
RGD1YBR260C TAF9Q05027 157 aa6.63□□□□□ -1.35
RGD1YBR260C IMH1Q06704 911 aaKnown RBP6.63□□□□□ -1.35
RGD1YBR260C PSK2Q08217 1101 aa6.63□□□□□ -1.35
RGD1YBR260C CDC8P00572 216 aa6.62□□□□□ -1.35
RGD1YBR260C SWI6P09959 803 aa6.62□□□□□ -1.35
RGD1YBR260C RPS6AP0CX37 236 aaKnown RBP6.62□□□□□ -1.35
RGD1YBR260C RPS6BP0CX38 236 aaPredicted RBP6.62□□□□□ -1.35
RGD1YBR260C TAL1P15019 335 aaKnown RBP6.62□□□□□ -1.35
RGD1YBR260C CNS1P33313 385 aa6.62□□□□□ -1.35
RGD1YBR260C AMN1P38285 549 aaPredicted RBP6.62□□□□□ -1.35
RGD1YBR260C SIP3P38717 1229 aa6.62□□□□□ -1.35
RGD1YBR260C CIC1P38779 376 aaKnown RBP6.62□□□□□ -1.35
RGD1YBR260C RPA14P50106 137 aa6.62□□□□□ -1.35
RGD1YBR260C MUB1Q03162 620 aa6.62□□□□□ -1.35
RGD1YBR260C SPC24Q04477 213 aa6.62□□□□□ -1.35
RGD1YBR260C WHI5Q12416 295 aa6.62□□□□□ -1.35
RGD1YBR260C SBP1P10080 294 aaKnown RBP6.62□□□□□ -1.35
RGD1YBR260C MTF2P10849 440 aa6.62□□□□□ -1.35
RGD1YBR260C UBP1P25037 809 aa6.62□□□□□ -1.35
RGD1YBR260C SET1P38827 1080 aaKnown RBP6.62□□□□□ -1.35
RGD1YBR260C SEC27P41811 889 aaKnown RBP6.62□□□□□ -1.35
RGD1YBR260C UTP22P53254 1237 aaPredicted RBP6.62□□□□□ -1.35
RGD1YBR260C HST2P53686 357 aa6.62□□□□□ -1.35
RGD1YBR260C SUB1P54000 292 aaKnown RBP6.62□□□□□ -1.35
RGD1YBR260C UFD2P54860 961 aa6.62□□□□□ -1.35
RGD1YBR260C YML119WQ03208 357 aa6.62□□□□□ -1.35
RGD1YBR260C NOC3Q07896 663 aaPredicted RBP6.62□□□□□ -1.35
RGD1YBR260C ALR1Q08269 859 aa6.62□□□□□ -1.35
RGD1YBR260C PIF1P07271 859 aa6.61□□□□□ -1.35
RGD1YBR260C YMR085WP0CF18 432 aa6.61□□□□□ -1.35
RGD1YBR260C RAD4P14736 754 aa6.61□□□□□ -1.35
RGD1YBR260C RAD57P25301 460 aa6.61□□□□□ -1.35
RGD1YBR260C RPN2P32565 945 aaKnown RBP6.61□□□□□ -1.35
RGD1YBR260C GRX4P32642 244 aa6.61□□□□□ -1.35
RGD1YBR260C STE13P33894 931 aa6.61□□□□□ -1.35
RGD1YBR260C RPC37P36121 282 aa6.61□□□□□ -1.35
RGD1YBR260C RFT1P38206 574 aaPredicted RBP6.61□□□□□ -1.35
RGD1YBR260C SHC1P39000 512 aa6.61□□□□□ -1.35
RGD1YBR260C SPO22P40511 975 aa6.61□□□□□ -1.35
RGD1YBR260C ERG5P54781 538 aa6.61□□□□□ -1.35
RGD1YBR260C MGR3Q04472 501 aa6.61□□□□□ -1.35
RGD1YBR260C SLX4Q12098 748 aa6.61□□□□□ -1.35
RGD1YBR260C ENO2P00925 437 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms