RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeastyeast

Gene ECM1, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM1YAL059W DOT1Q04089 582 aaKnown RBP6.48□□□□□ -1.37
ECM1YAL059W JIP5Q06214 492 aaPredicted RBP6.48□□□□□ -1.37
ECM1YAL059W ESF1Q06344 628 aaKnown RBP6.48□□□□□ -1.37
ECM1YAL059W SEC23P15303 768 aaKnown RBP6.47□□□□□ -1.37
ECM1YAL059W PEP7P32609 515 aa6.47□□□□□ -1.37
ECM1YAL059W PGM1P33401 570 aaKnown RBP6.47□□□□□ -1.37
ECM1YAL059W MTR4P47047 1073 aaKnown RBP6.47□□□□□ -1.37
ECM1YAL059W YGL140CP53120 1219 aa6.47□□□□□ -1.37
ECM1YAL059W HEM13P11353 328 aaKnown RBP6.45□□□□□ -1.38
ECM1YAL059W COQ2P32378 372 aa6.45□□□□□ -1.38
ECM1YAL059W SRP40P32583 406 aaPredicted RBP6.45□□□□□ -1.38
ECM1YAL059W GPT2P36148 743 aa6.45□□□□□ -1.38
ECM1YAL059W XKS1P42826 600 aa6.45□□□□□ -1.38
ECM1YAL059W RMD1Q03441 430 aa6.45□□□□□ -1.38
ECM1YAL059W UTP5Q04177 643 aaKnown RBP6.45□□□□□ -1.38
ECM1YAL059W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
ECM1YAL059W VMA4P22203 233 aaKnown RBP6.44□□□□□ -1.38
ECM1YAL059W NAM7P30771 971 aaKnown RBP6.44□□□□□ -1.38
ECM1YAL059W RDH54P38086 958 aa6.44□□□□□ -1.38
ECM1YAL059W SPO74P45819 413 aa6.44□□□□□ -1.38
ECM1YAL059W SAF1P38352 637 aa6.43□□□□□ -1.38
ECM1YAL059W ZDS1P50111 915 aaKnown RBP6.43□□□□□ -1.38
ECM1YAL059W YGR045CP53229 120 aa6.43□□□□□ -1.38
ECM1YAL059W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
ECM1YAL059W AVO1Q08236 1176 aa6.43□□□□□ -1.38
ECM1YAL059W YKL091CP33324 310 aaKnown RBP6.42□□□□□ -1.38
ECM1YAL059W ALG12P53730 551 aa6.42□□□□□ -1.38
ECM1YAL059W ELA1P53861 379 aaPredicted RBP6.42□□□□□ -1.38
ECM1YAL059W MAG2Q06436 670 aaKnown RBP6.42□□□□□ -1.38
ECM1YAL059W HDA2Q06629 674 aa6.42□□□□□ -1.38
ECM1YAL059W GIC2Q06648 383 aa6.42□□□□□ -1.38
ECM1YAL059W SSB1P11484 613 aaKnown RBP6.41□□□□□ -1.38
ECM1YAL059W MNN4P36044 1178 aa6.41□□□□□ -1.38
ECM1YAL059W YAR028WP39548 234 aa6.41□□□□□ -1.38
ECM1YAL059W SSB2P40150 613 aaKnown RBP6.41□□□□□ -1.38
ECM1YAL059W YLR122CQ12312 125 aa6.41□□□□□ -1.38
ECM1YAL059W DED1P06634 604 aaKnown RBP6.4□□□□□ -1.38
ECM1YAL059W TAF13P11747 167 aa6.4□□□□□ -1.38
ECM1YAL059W VAC8P39968 578 aa6.4□□□□□ -1.38
ECM1YAL059W TPM2P40414 161 aa6.4□□□□□ -1.38
ECM1YAL059W MSH4P40965 878 aaPredicted RBP6.4□□□□□ -1.38
ECM1YAL059W MRL1Q06815 381 aa6.4□□□□□ -1.38
ECM1YAL059W GCR1P07261 785 aa6.39□□□□□ -1.39
ECM1YAL059W CIT2P08679 460 aa6.39□□□□□ -1.39
ECM1YAL059W PET112P33893 541 aa6.39□□□□□ -1.39
ECM1YAL059W ATG14P38270 344 aa6.39□□□□□ -1.39
ECM1YAL059W PMC1P38929 1173 aaPredicted RBP6.39□□□□□ -1.39
ECM1YAL059W GNP1P48813 663 aa6.39□□□□□ -1.39
ECM1YAL059W YNR063WP53749 607 aa6.39□□□□□ -1.39
ECM1YAL059W POB3Q04636 552 aaKnown RBP6.39□□□□□ -1.39
ECM1YAL059W EST2Q06163 884 aa6.39□□□□□ -1.39
ECM1YAL059W SMY2P32909 740 aaKnown RBP6.38□□□□□ -1.39
ECM1YAL059W ADD66P36040 267 aa6.38□□□□□ -1.39
ECM1YAL059W KAE1P36132 386 aa6.38□□□□□ -1.39
ECM1YAL059W RKM2Q03942 479 aa6.38□□□□□ -1.39
ECM1YAL059W CHS2P14180 963 aa6.37□□□□□ -1.39
ECM1YAL059W NFS1P25374 497 aa6.37□□□□□ -1.39
ECM1YAL059W WHI3P34761 661 aaKnown RBP6.37□□□□□ -1.39
ECM1YAL059W NOP2P40991 618 aaKnown RBP6.37□□□□□ -1.39
ECM1YAL059W ALT1P52893 592 aa6.37□□□□□ -1.39
ECM1YAL059W SIW14P53965 281 aa6.37□□□□□ -1.39
ECM1YAL059W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
ECM1YAL059W ROD1Q02805 837 aa6.37□□□□□ -1.39
ECM1YAL059W YOL057WQ08225 711 aa6.37□□□□□ -1.39
ECM1YAL059W RPS4AP0CX35 261 aaKnown RBP6.36□□□□□ -1.39
ECM1YAL059W RPS4BP0CX36 261 aaKnown RBP6.36□□□□□ -1.39
ECM1YAL059W NNK1P36003 928 aa6.36□□□□□ -1.39
ECM1YAL059W MMM1P41800 426 aa6.36□□□□□ -1.39
ECM1YAL059W IOC3P43596 787 aa6.36□□□□□ -1.39
ECM1YAL059W LAP2Q10740 671 aa6.36□□□□□ -1.39
ECM1YAL059W AFG2P32794 780 aa6.35□□□□□ -1.39
ECM1YAL059W HSE1P38753 452 aa6.35□□□□□ -1.39
ECM1YAL059W HXT13P39924 564 aa6.35□□□□□ -1.39
ECM1YAL059W HXT17P53631 564 aa6.35□□□□□ -1.39
ECM1YAL059W HXT15P54854 567 aa6.35□□□□□ -1.39
ECM1YAL059W EAR1Q03212 550 aa6.35□□□□□ -1.39
ECM1YAL059W RSA3Q05942 220 aaKnown RBP6.35□□□□□ -1.39
ECM1YAL059W RTT10Q08924 1013 aa6.35□□□□□ -1.39
ECM1YAL059W MNR2P35724 969 aa6.34□□□□□ -1.39
ECM1YAL059W CIT3P43635 486 aa6.34□□□□□ -1.39
ECM1YAL059W ENT3P47160 408 aa6.34□□□□□ -1.39
ECM1YAL059W YGR130CP53278 816 aa6.34□□□□□ -1.39
ECM1YAL059W ALD6P54115 500 aaKnown RBP6.34□□□□□ -1.39
ECM1YAL059W YLR257WQ06146 321 aaKnown RBP6.34□□□□□ -1.39
ECM1YAL059W SBP1P10080 294 aaKnown RBP6.33□□□□□ -1.4
ECM1YAL059W MSB1P21339 1137 aaKnown RBP6.33□□□□□ -1.4
ECM1YAL059W DUT1P33317 147 aa6.33□□□□□ -1.4
ECM1YAL059W YKR073CP36153 106 aa6.33□□□□□ -1.4
ECM1YAL059W RAT1Q02792 1006 aaKnown RBP6.33□□□□□ -1.4
ECM1YAL059W TPP1Q03796 238 aa6.33□□□□□ -1.4
ECM1YAL059W TRP3P00937 484 aa6.32□□□□□ -1.4
ECM1YAL059W CDC34P14682 295 aa6.32□□□□□ -1.4
ECM1YAL059W RET1P22276 1149 aaKnown RBP6.32□□□□□ -1.4
ECM1YAL059W MKK2P32491 506 aa6.32□□□□□ -1.4
ECM1YAL059W GRX4P32642 244 aa6.32□□□□□ -1.4
ECM1YAL059W NMD3P38861 518 aaKnown RBP6.32□□□□□ -1.4
ECM1YAL059W TY4A-JP47023 414 aa6.32□□□□□ -1.4
ECM1YAL059W NSE3Q05541 303 aa6.32□□□□□ -1.4
ECM1YAL059W PUS7Q08647 676 aaKnown RBP6.32□□□□□ -1.4
ECM1YAL059W GAL11P19659 1081 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms