RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 GTF2IP78347 998 aa7.32□□□□□ -1.24
CTNNA1-212ENST00000518919 PTCRAQ6ISU1 281 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-212ENST00000518919 LARGE2Q8N3Y3 721 aa7.32□□□□□ -1.24
CTNNA1-212ENST00000518919 SLC10A4Q96EP9 437 aa7.32□□□□□ -1.24
CTNNA1-212ENST00000518919 CCDC85AQ96PX6 553 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-212ENST00000518919 CLIP1P30622 1438 aa7.32□□□□□ -1.24
CTNNA1-212ENST00000518919 LAMC3Q9Y6N6 1575 aa7.32□□□□□ -1.24
CTNNA1-212ENST00000518919 CUX2O14529 1486 aa7.31□□□□□ -1.24
CTNNA1-212ENST00000518919 SOWAHDA6NJG2 315 aa7.31□□□□□ -1.24
CTNNA1-212ENST00000518919 PSME1Q06323 249 aa7.31□□□□□ -1.24
CTNNA1-212ENST00000518919 NYAP1Q6ZVC0 841 aa7.31□□□□□ -1.24
CTNNA1-212ENST00000518919 BPHLQ86WA6 291 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-212ENST00000518919 SIX5Q8N196 739 aa7.31□□□□□ -1.24
CTNNA1-212ENST00000518919 MTRQ99707 1265 aa7.31□□□□□ -1.24
CTNNA1-212ENST00000518919 SLC6A16Q9GZN6 736 aa7.31□□□□□ -1.24
CTNNA1-212ENST00000518919 KIAA1024Q9UPX6 916 aa7.31□□□□□ -1.24
CTNNA1-212ENST00000518919 TOPBP1Q92547 1522 aa7.31□□□□□ -1.24
CTNNA1-212ENST00000518919 GIGYF1O75420 1035 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-212ENST00000518919 TSGA10IPQ3SY00 556 aa7.3□□□□□ -1.24
CTNNA1-212ENST00000518919 LINC01559Q495D7 138 aa7.3□□□□□ -1.24
CTNNA1-212ENST00000518919 ERFEQ4G0M1 354 aa7.3□□□□□ -1.24
CTNNA1-212ENST00000518919 RNF20Q5VTR2 975 aa7.3□□□□□ -1.24
CTNNA1-212ENST00000518919 SH3RF1Q7Z6J0 888 aa7.3□□□□□ -1.24
CTNNA1-212ENST00000518919 URB2Q14146 1524 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-212ENST00000518919 PRMT3O60678 531 aa7.29□□□□□ -1.24
CTNNA1-212ENST00000518919 SEC13P55735 322 aa7.29□□□□□ -1.24
CTNNA1-212ENST00000518919 NBPF20Q3BBV1 942 aa7.29□□□□□ -1.24
CTNNA1-212ENST00000518919 TPCN2Q8NHX9 752 aa7.29□□□□□ -1.24
CTNNA1-212ENST00000518919 KCTD12Q96CX2 325 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-212ENST00000518919 BIN2Q9UBW5 565 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-212ENST00000518919 POLA1P09884 1462 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-212ENST00000518919 VPS8Q8N3P4 1428 aa7.28□□□□□ -1.24
CTNNA1-212ENST00000518919 CCDC102BQ68D86 513 aa7.28□□□□□ -1.24
CTNNA1-212ENST00000518919 ZNF511Q8NB15 262 aa7.28□□□□□ -1.24
CTNNA1-212ENST00000518919 C1orf216Q8TAB5 229 aa7.28□□□□□ -1.24
CTNNA1-212ENST00000518919 BAP1Q92560 729 aa7.28□□□□□ -1.24
CTNNA1-212ENST00000518919 FOXJ1Q92949 421 aa7.28□□□□□ -1.24
CTNNA1-212ENST00000518919 PCDHB11Q9Y5F2 797 aa7.28□□□□□ -1.24
CTNNA1-212ENST00000518919 ARAP1Q96P48 1450 aa7.28□□□□□ -1.24
CTNNA1-212ENST00000518919 ABCA10Q8WWZ4 1543 aa7.27□□□□□ -1.25
CTNNA1-212ENST00000518919 ERCC3P19447 782 aa7.27□□□□□ -1.25
CTNNA1-212ENST00000518919 SCNN1AP37088 669 aa7.27□□□□□ -1.25
CTNNA1-212ENST00000518919 PPARGC1BQ86YN6 1023 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-212ENST00000518919 SIRT1Q96EB6 747 aa7.27□□□□□ -1.25
CTNNA1-212ENST00000518919 IL21Q9HBE4 155 aa7.27□□□□□ -1.25
CTNNA1-212ENST00000518919 IGF1RP08069 1367 aa7.27□□□□□ -1.25
CTNNA1-212ENST00000518919 RAD54L2Q9Y4B4 1467 aa7.27□□□□□ -1.25
CTNNA1-212ENST00000518919 SFI1A8K8P3 1242 aa7.26□□□□□ -1.25
CTNNA1-212ENST00000518919 ZBTB7BO15156 539 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-212ENST00000518919 DKK1O94907 266 aa7.26□□□□□ -1.25
CTNNA1-212ENST00000518919 MARSP56192 900 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-212ENST00000518919 C4orf48Q5BLP8 95 aa7.26□□□□□ -1.25
CTNNA1-212ENST00000518919 DNAJC14Q6Y2X3 702 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-212ENST00000518919 PRIMPOLQ96LW4 560 aa7.26□□□□□ -1.25
CTNNA1-212ENST00000518919 CXXC1Q9P0U4 656 aaPredicted RBP7.26□□□□□ -1.25
CTNNA1-212ENST00000518919 FCF1Q9Y324 198 aaKnown RBP7.26□□□□□ -1.25
CTNNA1-212ENST00000518919 WDR97A6NE52 1622 aa7.26□□□□□ -1.25
CTNNA1-212ENST00000518919 RBM47A0AV96 593 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-212ENST00000518919 S1PR4O95977 384 aa7.25□□□□□ -1.25
CTNNA1-212ENST00000518919 ABL1P00519 1130 aa7.25□□□□□ -1.25
CTNNA1-212ENST00000518919 OCLNQ16625 522 aa7.25□□□□□ -1.25
CTNNA1-212ENST00000518919 ZNF516Q92618 1163 aa7.25□□□□□ -1.25
CTNNA1-212ENST00000518919 C1QTNF2Q9BXJ5 285 aa7.25□□□□□ -1.25
CTNNA1-212ENST00000518919 PCDH10Q9P2E7 1040 aa7.25□□□□□ -1.25
CTNNA1-212ENST00000518919 CDV3Q9UKY7 258 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-212ENST00000518919 H3BRB1 525 aa7.24□□□□□ -1.25
CTNNA1-212ENST00000518919 USP4Q13107 963 aa7.24□□□□□ -1.25
CTNNA1-212ENST00000518919 ZNF211Q13398 564 aaPredicted RBP7.24□□□□□ -1.25
CTNNA1-212ENST00000518919 TJAP1Q5JTD0 557 aa7.24□□□□□ -1.25
CTNNA1-212ENST00000518919 LCE2DQ5TA82 110 aaPredicted RBP7.24□□□□□ -1.25
CTNNA1-212ENST00000518919 SEPT12Q8IYM1 358 aa7.24□□□□□ -1.25
CTNNA1-212ENST00000518919 TUT1Q9H6E5 874 aaKnown RBP7.24□□□□□ -1.25
CTNNA1-212ENST00000518919 EGFL7Q9UHF1 273 aa7.24□□□□□ -1.25
CTNNA1-212ENST00000518919 PCDHGA11Q9Y5H2 935 aa7.24□□□□□ -1.25
CTNNA1-212ENST00000518919 KIF21AQ7Z4S6 1674 aa7.24□□□□□ -1.25
CTNNA1-212ENST00000518919 PDS5BQ9NTI5 1447 aa7.24□□□□□ -1.25
CTNNA1-212ENST00000518919 UNCXA6NJT0 531 aa7.23□□□□□ -1.25
CTNNA1-212ENST00000518919 ESPNB1AK53 854 aa7.23□□□□□ -1.25
CTNNA1-212ENST00000518919 RAB15P59190 212 aa7.23□□□□□ -1.25
CTNNA1-212ENST00000518919 TAS1R3Q7RTX0 852 aa7.23□□□□□ -1.25
CTNNA1-212ENST00000518919 CCDC125Q86Z20 511 aa7.23□□□□□ -1.25
CTNNA1-212ENST00000518919 HINFPQ9BQA5 517 aa7.23□□□□□ -1.25
CTNNA1-212ENST00000518919 ARHGAP35Q9NRY4 1499 aa7.23□□□□□ -1.25
CTNNA1-212ENST00000518919 CARMIL1Q5VZK9 1371 aa7.22□□□□□ -1.25
CTNNA1-212ENST00000518919 LGR5O75473 907 aa7.22□□□□□ -1.25
CTNNA1-212ENST00000518919 MYCP01106 439 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-212ENST00000518919 PTPN5P54829 565 aa7.22□□□□□ -1.25
CTNNA1-212ENST00000518919 GLYCTKQ8IVS8 523 aa7.22□□□□□ -1.25
CTNNA1-212ENST00000518919 TRMT44Q8IYL2 757 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-212ENST00000518919 MKNK1Q9BUB5 465 aa7.22□□□□□ -1.25
CTNNA1-212ENST00000518919 BCL2L13Q9BXK5 485 aa7.22□□□□□ -1.25
CTNNA1-212ENST00000518919 ABCA5Q8WWZ7 1642 aa7.22□□□□□ -1.25
CTNNA1-212ENST00000518919 SH3BP2P78314 561 aa7.21□□□□□ -1.26
CTNNA1-212ENST00000518919 ANO2Q9NQ90 1003 aa7.21□□□□□ -1.26
CTNNA1-212ENST00000518919 TSEN2Q8NCE0 465 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-212ENST00000518919 NKX2-3Q8TAU0 364 aa7.2□□□□□ -1.26
CTNNA1-212ENST00000518919 KCTD15Q96SI1 283 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-212ENST00000518919 KRTAP3-3Q9BYR6 98 aa7.2□□□□□ -1.26
CTNNA1-212ENST00000518919 KRTAP3-2Q9BYR7 98 aa7.2□□□□□ -1.26
CTNNA1-212ENST00000518919 CUL7Q14999 1698 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms