RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Ppm1gQ61074 542 aa18.86■□□□□ 0.61
Upf1-202ENSMUST00000215817 Efcab2Q9CQ46 164 aa18.86■□□□□ 0.61
Upf1-202ENSMUST00000215817 Sos1Q62245 1319 aa18.85■□□□□ 0.61
Upf1-202ENSMUST00000215817 Slf2Q6P9P0 1278 aa18.85■□□□□ 0.61
Upf1-202ENSMUST00000215817 Gm16486A0A1D5RMD1 1434 aa18.85■□□□□ 0.61
Upf1-202ENSMUST00000215817 Pm20d1Q8C165 503 aa18.84■□□□□ 0.61
Upf1-202ENSMUST00000215817 Cgnl1Q6AW69 1298 aa18.84■□□□□ 0.61
Upf1-202ENSMUST00000215817 Plcd4Q8K3R3 807 aa18.84■□□□□ 0.61
Upf1-202ENSMUST00000215817 Dhx16G3X8X0 1044 aaKnown RBP18.84■□□□□ 0.61
Upf1-202ENSMUST00000215817 Smarcc1P97496 1104 aa18.84■□□□□ 0.61
Upf1-202ENSMUST00000215817 Znf335A2A5K6 1337 aa18.84■□□□□ 0.61
Upf1-202ENSMUST00000215817 Pde4dQ01063 747 aa18.83■□□□□ 0.61
Upf1-202ENSMUST00000215817 4930407I10RikD3Z5T8 1512 aa18.82■□□□□ 0.6
Upf1-202ENSMUST00000215817 Arhgap23Q69ZH9 1483 aa18.82■□□□□ 0.6
Upf1-202ENSMUST00000215817 CastP51125 788 aa18.82■□□□□ 0.6
Upf1-202ENSMUST00000215817 Tspyl2Q7TQI8 677 aa18.82■□□□□ 0.6
Upf1-202ENSMUST00000215817 Prex1Q69ZK0 1650 aa18.82■□□□□ 0.6
Upf1-202ENSMUST00000215817 VeztQ3ZK22 780 aa18.82■□□□□ 0.6
Upf1-202ENSMUST00000215817 Kif21bQ9QXL1 1668 aa18.81■□□□□ 0.6
Upf1-202ENSMUST00000215817 Ell2Q3UKU1 639 aa18.81■□□□□ 0.6
Upf1-202ENSMUST00000215817 Q3UPC7 1272 aa18.81■□□□□ 0.6
Upf1-202ENSMUST00000215817 Fam83gQ5SWY7 812 aa18.81■□□□□ 0.6
Upf1-202ENSMUST00000215817 Ncoa4Q5U4H9 625 aa18.81■□□□□ 0.6
Upf1-202ENSMUST00000215817 Nyap1Q6PFX7 833 aa18.81■□□□□ 0.6
Upf1-202ENSMUST00000215817 Srgap3Q812A2 1099 aa18.81■□□□□ 0.6
Upf1-202ENSMUST00000215817 FancaQ9JL70 1439 aa18.8■□□□□ 0.6
Upf1-202ENSMUST00000215817 Scaf11E9PZM7 1456 aaKnown RBP18.8■□□□□ 0.6
Upf1-202ENSMUST00000215817 Htatsf1Q8BGC0 757 aa18.8■□□□□ 0.6
Upf1-202ENSMUST00000215817 Ginm1Q91WR6 327 aa18.8■□□□□ 0.6
Upf1-202ENSMUST00000215817 IghaA0A0A6YXW6 389 aa18.8■□□□□ 0.6
Upf1-202ENSMUST00000215817 Adgrl1Q80TR1 1466 aa18.8■□□□□ 0.6
Upf1-202ENSMUST00000215817 EappQ5BU09 281 aa18.79■□□□□ 0.6
Upf1-202ENSMUST00000215817 Trim34bJ3QNR8 485 aa18.79■□□□□ 0.6
Upf1-202ENSMUST00000215817 Soga3Q6NZL0 945 aa18.79■□□□□ 0.6
Upf1-202ENSMUST00000215817 Q9D2X8 372 aa18.79■□□□□ 0.6
Upf1-202ENSMUST00000215817 Hmox1P14901 289 aa18.79■□□□□ 0.6
Upf1-202ENSMUST00000215817 Noc3lQ8VI84 807 aaKnown RBP18.79■□□□□ 0.6
Upf1-202ENSMUST00000215817 InhbeO08717 350 aa18.78■□□□□ 0.6
Upf1-202ENSMUST00000215817 Aldh1l1Q8R0Y6 902 aa18.78■□□□□ 0.6
Upf1-202ENSMUST00000215817 Sgsm1Q8BPQ7 1093 aa18.78■□□□□ 0.6
Upf1-202ENSMUST00000215817 GckrQ91X44 587 aa18.78■□□□□ 0.6
Upf1-202ENSMUST00000215817 Slc39a6Q8C145 765 aa18.78■□□□□ 0.6
Upf1-202ENSMUST00000215817 Stk3Q9JI10 497 aa18.77■□□□□ 0.6
Upf1-202ENSMUST00000215817 Nphp1Q9QY53 687 aa18.77■□□□□ 0.6
Upf1-202ENSMUST00000215817 Ifit1bl2Q3U687 466 aa18.77■□□□□ 0.59
Upf1-202ENSMUST00000215817 Nol8Q3UHX0 1147 aaKnown RBP18.77■□□□□ 0.59
Upf1-202ENSMUST00000215817 Dnttip2Q8R2M2 758 aaKnown RBP18.77■□□□□ 0.59
Upf1-202ENSMUST00000215817 Tnnt2P50752 301 aa18.76■□□□□ 0.59
Upf1-202ENSMUST00000215817 Igflr1Q3U4N7 345 aa18.76■□□□□ 0.59
Upf1-202ENSMUST00000215817 Map3k2Q61083 619 aa18.76■□□□□ 0.59
Upf1-202ENSMUST00000215817 RgmbQ7TQ33 436 aa18.76■□□□□ 0.59
Upf1-202ENSMUST00000215817 Miga2Q8BK03 593 aa18.76■□□□□ 0.59
Upf1-202ENSMUST00000215817 Akap12Q9WTQ5 1684 aa18.76■□□□□ 0.59
Upf1-202ENSMUST00000215817 Irf9Q61179 399 aa18.76■□□□□ 0.59
Upf1-202ENSMUST00000215817 Ipo8Q7TMY7 1010 aa18.76■□□□□ 0.59
Upf1-202ENSMUST00000215817 Gas2l2Q5SSG4 860 aa18.76■□□□□ 0.59
Upf1-202ENSMUST00000215817 Iffo2Q8R2V2 512 aa18.76■□□□□ 0.59
Upf1-202ENSMUST00000215817 Atf7ipQ7TT18 1306 aa18.76■□□□□ 0.59
Upf1-202ENSMUST00000215817 KarsQ99MN1 595 aaKnown RBP18.75■□□□□ 0.59
Upf1-202ENSMUST00000215817 Phkg2Q9DB30 406 aa18.75■□□□□ 0.59
Upf1-202ENSMUST00000215817 Uggt1Q6P5E4 1551 aa18.75■□□□□ 0.59
Upf1-202ENSMUST00000215817 Rims1Q99NE5 1463 aa18.75■□□□□ 0.59
Upf1-202ENSMUST00000215817 Cdhr2E9Q7P9 1308 aa18.74■□□□□ 0.59
Upf1-202ENSMUST00000215817 Myd88P22366 296 aa18.74■□□□□ 0.59
Upf1-202ENSMUST00000215817 Wdhd1P59328 1117 aa18.74■□□□□ 0.59
Upf1-202ENSMUST00000215817 Prkab2Q6PAM0 271 aa18.74■□□□□ 0.59
Upf1-202ENSMUST00000215817 GptQ8QZR5 496 aa18.74■□□□□ 0.59
Upf1-202ENSMUST00000215817 Plcb2A3KGF7 1181 aa18.74■□□□□ 0.59
Upf1-202ENSMUST00000215817 Prkrip1Q9CWV6 186 aaKnown RBP18.74■□□□□ 0.59
Upf1-202ENSMUST00000215817 GpkowQ56A08 488 aa18.74■□□□□ 0.59
Upf1-202ENSMUST00000215817 Zap70P43404 618 aa18.73■□□□□ 0.59
Upf1-202ENSMUST00000215817 Bsdc1Q80Y55 427 aa18.73■□□□□ 0.59
Upf1-202ENSMUST00000215817 MvpQ9EQK5 861 aa18.73■□□□□ 0.59
Upf1-202ENSMUST00000215817 Ipo9Q91YE6 1041 aa18.73■□□□□ 0.59
Upf1-202ENSMUST00000215817 Prkar2bP31324 416 aa18.73■□□□□ 0.59
Upf1-202ENSMUST00000215817 Cyp46a1Q9WVK8 500 aa18.73■□□□□ 0.59
Upf1-202ENSMUST00000215817 Eif3aP23116 1344 aaKnown RBP18.73■□□□□ 0.59
Upf1-202ENSMUST00000215817 Sik1Q60670 779 aa18.73■□□□□ 0.59
Upf1-202ENSMUST00000215817 Tmem2Q5FWI3 1383 aa18.73■□□□□ 0.59
Upf1-202ENSMUST00000215817 SkilQ60665 675 aa18.72■□□□□ 0.59
Upf1-202ENSMUST00000215817 Trim28Q62318 834 aa18.72■□□□□ 0.59
Upf1-202ENSMUST00000215817 Med14A2ABV5 1459 aaKnown RBP18.72■□□□□ 0.59
Upf1-202ENSMUST00000215817 Uhrf1bp1lA2RSJ4 1457 aa18.72■□□□□ 0.59
Upf1-202ENSMUST00000215817 CrcpO35427 148 aa18.72■□□□□ 0.59
Upf1-202ENSMUST00000215817 Pdzd9Q9D9M4 266 aa18.72■□□□□ 0.59
Upf1-202ENSMUST00000215817 Iqgap3F8VQ29 1632 aa18.72■□□□□ 0.59
Upf1-202ENSMUST00000215817 Xrn1P97789 1719 aaKnown RBP18.71■□□□□ 0.59
Upf1-202ENSMUST00000215817 Asic4Q7TNS7 539 aa18.71■□□□□ 0.59
Upf1-202ENSMUST00000215817 Taf7Q9R1C0 341 aa18.71■□□□□ 0.59
Upf1-202ENSMUST00000215817 Ankle2Q6P1H6 964 aa18.71■□□□□ 0.59
Upf1-202ENSMUST00000215817 Taok3Q8BYC6 898 aa18.71■□□□□ 0.59
Upf1-202ENSMUST00000215817 Erc2Q6PH08 957 aa18.7■□□□□ 0.58
Upf1-202ENSMUST00000215817 Rrs1Q9CYH6 365 aaKnown RBP18.7■□□□□ 0.58
Upf1-202ENSMUST00000215817 Plxnc1Q9QZC2 1574 aa18.7■□□□□ 0.58
Upf1-202ENSMUST00000215817 Kcnn1Q9EQR3 537 aa18.7■□□□□ 0.58
Upf1-202ENSMUST00000215817 ArsiQ32KI9 573 aa18.69■□□□□ 0.58
Upf1-202ENSMUST00000215817 Atl3Q91YH5 541 aa18.68■□□□□ 0.58
Upf1-202ENSMUST00000215817 Jdp2P97875 163 aa18.68■□□□□ 0.58
Upf1-202ENSMUST00000215817 Clcn1Q64347 994 aa18.68■□□□□ 0.58
Upf1-202ENSMUST00000215817 Msl1Q6PDM1 616 aa18.68■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 71.4 ms