RNA–Protein interactions for RNA: ENSMUST00000170873.9

Vps50-203, Transcript of Syndetin, mousemouse

TSL 1 (best) BASIC

Gene Vps50, Length 3,687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50-203ENSMUST00000170873 Hoxa7P02830 229 aa8.16□□□□□ -1.1
Vps50-203ENSMUST00000170873 Mcm2P97310 904 aa8.16□□□□□ -1.1
Vps50-203ENSMUST00000170873 Prdm10Q3UTQ7 1184 aa8.16□□□□□ -1.1
Vps50-203ENSMUST00000170873 EngaseQ8BX80 734 aa8.15□□□□□ -1.1
Vps50-203ENSMUST00000170873 Gcc1Q9D4H2 778 aa8.15□□□□□ -1.1
Vps50-203ENSMUST00000170873 Cabp2Q9JLK4 216 aa8.15□□□□□ -1.1
Vps50-203ENSMUST00000170873 Dnajc5gQ8C632 165 aa8.15□□□□□ -1.1
Vps50-203ENSMUST00000170873 CarsQ9ER72 831 aaKnown RBP8.15□□□□□ -1.1
Vps50-203ENSMUST00000170873 Rab11fip3Q8CHD8 1047 aa8.15□□□□□ -1.11
Vps50-203ENSMUST00000170873 Catsper2A2ARP9 588 aa8.14□□□□□ -1.11
Vps50-203ENSMUST00000170873 Cog6Q8R3I3 657 aa8.14□□□□□ -1.11
Vps50-203ENSMUST00000170873 Abcc12Q80WJ6 1366 aa8.14□□□□□ -1.11
Vps50-203ENSMUST00000170873 Nrxn3Q6P9K9 1571 aa8.14□□□□□ -1.11
Vps50-203ENSMUST00000170873 Kdm6aO70546 1401 aa8.14□□□□□ -1.11
Vps50-203ENSMUST00000170873 Mcm10Q0VBD2 885 aa8.14□□□□□ -1.11
Vps50-203ENSMUST00000170873 Elp1Q7TT37 1333 aaKnown RBP8.13□□□□□ -1.11
Vps50-203ENSMUST00000170873 Txndc2Q6P902 515 aa8.13□□□□□ -1.11
Vps50-203ENSMUST00000170873 Usp16Q99LG0 825 aa8.13□□□□□ -1.11
Vps50-203ENSMUST00000170873 Foxp4Q9DBY0 795 aaKnown RBP8.13□□□□□ -1.11
Vps50-203ENSMUST00000170873 Ap3b2Q9JME5 1082 aa8.13□□□□□ -1.11
Vps50-203ENSMUST00000170873 Birc3O08863 600 aa8.13□□□□□ -1.11
Vps50-203ENSMUST00000170873 Tbc1d9Q3UYK3 1264 aa8.13□□□□□ -1.11
Vps50-203ENSMUST00000170873 Stk31Q99MW1 1018 aa8.13□□□□□ -1.11
Vps50-203ENSMUST00000170873 Ddx60E9PZQ1 1711 aa8.13□□□□□ -1.11
Vps50-203ENSMUST00000170873 Nlgn1Q99K10 843 aa8.13□□□□□ -1.11
Vps50-203ENSMUST00000170873 HnrnpmQ9D0E1 729 aaKnown RBP8.13□□□□□ -1.11
Vps50-203ENSMUST00000170873 Tmem2Q5FWI3 1383 aa8.12□□□□□ -1.11
Vps50-203ENSMUST00000170873 Irx3P81067 507 aa8.12□□□□□ -1.11
Vps50-203ENSMUST00000170873 Bcl9lQ67FY2 1494 aa8.12□□□□□ -1.11
Vps50-203ENSMUST00000170873 Cluap1Q8R3P7 413 aa8.12□□□□□ -1.11
Vps50-203ENSMUST00000170873 Stk36Q69ZM6 1316 aa8.12□□□□□ -1.11
Vps50-203ENSMUST00000170873 Atf5O70191 283 aa8.11□□□□□ -1.11
Vps50-203ENSMUST00000170873 Polr3glQ8R0C0 218 aa8.11□□□□□ -1.11
Vps50-203ENSMUST00000170873 HnrnpuQ8VEK3 800 aaKnown RBP8.11□□□□□ -1.11
Vps50-203ENSMUST00000170873 Isy1Q69ZQ2 285 aaKnown RBP8.11□□□□□ -1.11
Vps50-203ENSMUST00000170873 Fam13aQ8BGI4 693 aa8.11□□□□□ -1.11
Vps50-203ENSMUST00000170873 Ppp6r3Q922D4 844 aa8.11□□□□□ -1.11
Vps50-203ENSMUST00000170873 Trim26Q99PN3 545 aa8.11□□□□□ -1.11
Vps50-203ENSMUST00000170873 Armcx1Q9CX83 456 aa8.11□□□□□ -1.11
Vps50-203ENSMUST00000170873 Sipa1l3G3X9J0 1776 aa8.11□□□□□ -1.11
Vps50-203ENSMUST00000170873 Atp10bB1AWN4 1474 aa8.11□□□□□ -1.11
Vps50-203ENSMUST00000170873 Tns3Q5SSZ5 1440 aa8.11□□□□□ -1.11
Vps50-203ENSMUST00000170873 Gm6268A2A3U9 297 aa8.1□□□□□ -1.11
Vps50-203ENSMUST00000170873 Idi1P58044 227 aa8.1□□□□□ -1.11
Vps50-203ENSMUST00000170873 Ric3Q8BPM6 367 aa8.1□□□□□ -1.11
Vps50-203ENSMUST00000170873 Klhdc4Q921I2 584 aa8.1□□□□□ -1.11
Vps50-203ENSMUST00000170873 Mfap1aC0HKD8 439 aaKnown RBP8.1□□□□□ -1.11
Vps50-203ENSMUST00000170873 Mfap1bC0HKD9 439 aaKnown RBP8.1□□□□□ -1.11
Vps50-203ENSMUST00000170873 Nectin2P32507 530 aa8.1□□□□□ -1.11
Vps50-203ENSMUST00000170873 Nol8Q3UHX0 1147 aaKnown RBP8.1□□□□□ -1.11
Vps50-203ENSMUST00000170873 TmpoQ61033 693 aaKnown RBP8.1□□□□□ -1.11
Vps50-203ENSMUST00000170873 Nutm1Q8BHP2 1126 aa8.1□□□□□ -1.11
Vps50-203ENSMUST00000170873 PappaQ8R4K8 1624 aa8.1□□□□□ -1.11
Vps50-203ENSMUST00000170873 Shank3Q4ACU6 1730 aa8.1□□□□□ -1.11
Vps50-203ENSMUST00000170873 Gtf3c3Q3TMP1 882 aa8.09□□□□□ -1.11
Vps50-203ENSMUST00000170873 Ncoa4Q5U4H9 625 aa8.09□□□□□ -1.11
Vps50-203ENSMUST00000170873 Shank2Q80Z38 1476 aa8.09□□□□□ -1.11
Vps50-203ENSMUST00000170873 Hoxc9P09633 260 aa8.09□□□□□ -1.11
Vps50-203ENSMUST00000170873 Eya1P97767 591 aa8.09□□□□□ -1.11
Vps50-203ENSMUST00000170873 Nucb1Q02819 459 aaKnown RBP8.09□□□□□ -1.11
Vps50-203ENSMUST00000170873 1700010I14RikQ7TPG0 532 aa8.09□□□□□ -1.11
Vps50-203ENSMUST00000170873 Znf330Q922H9 316 aa8.09□□□□□ -1.11
Vps50-203ENSMUST00000170873 Aifm3Q3TY86 605 aa8.08□□□□□ -1.12
Vps50-203ENSMUST00000170873 Eif4g2Q62448 906 aaKnown RBP8.08□□□□□ -1.12
Vps50-203ENSMUST00000170873 Atg4a-psA0A0G2JFS9 396 aa8.08□□□□□ -1.12
Vps50-203ENSMUST00000170873 MpripP97434 1024 aa8.08□□□□□ -1.12
Vps50-203ENSMUST00000170873 Tmco5bQ80X59 307 aa8.08□□□□□ -1.12
Vps50-203ENSMUST00000170873 Atg4aQ8C9S8 396 aa8.08□□□□□ -1.12
Vps50-203ENSMUST00000170873 Nsfl1cQ9CZ44 370 aaKnown RBP8.08□□□□□ -1.12
Vps50-203ENSMUST00000170873 Dennd6aQ8BH65 605 aa8.08□□□□□ -1.12
Vps50-203ENSMUST00000170873 Noc3lQ8VI84 807 aaKnown RBP8.08□□□□□ -1.12
Vps50-203ENSMUST00000170873 Abca3Q8R420 1704 aa8.08□□□□□ -1.12
Vps50-203ENSMUST00000170873 Mcm4P49717 862 aa8.07□□□□□ -1.12
Vps50-203ENSMUST00000170873 Kif20aP97329 887 aa8.07□□□□□ -1.12
Vps50-203ENSMUST00000170873 FanclQ9CR14 375 aa8.07□□□□□ -1.12
Vps50-203ENSMUST00000170873 Pdia3P27773 505 aaKnown RBP8.07□□□□□ -1.12
Vps50-203ENSMUST00000170873 Mrps27Q8BK72 415 aaKnown RBP8.07□□□□□ -1.12
Vps50-203ENSMUST00000170873 Tns2Q8CGB6 1400 aa8.06□□□□□ -1.12
Vps50-203ENSMUST00000170873 Slit1Q80TR4 1531 aa8.06□□□□□ -1.12
Vps50-203ENSMUST00000170873 Cnksr1A2A9K7 700 aa8.06□□□□□ -1.12
Vps50-203ENSMUST00000170873 Prkar2bP31324 416 aa8.06□□□□□ -1.12
Vps50-203ENSMUST00000170873 Rsph3aQ3UFY4 516 aa8.06□□□□□ -1.12
Vps50-203ENSMUST00000170873 Atg3Q9CPX6 314 aa8.06□□□□□ -1.12
Vps50-203ENSMUST00000170873 Disp3A3KFU9 1347 aa8.06□□□□□ -1.12
Vps50-203ENSMUST00000170873 Zfp142G5E869 1843 aa8.06□□□□□ -1.12
Vps50-203ENSMUST00000170873 Aplp1Q03157 653 aa8.06□□□□□ -1.12
Vps50-203ENSMUST00000170873 DaxxO35613 739 aa8.05□□□□□ -1.12
Vps50-203ENSMUST00000170873 Mmp8O70138 465 aa8.05□□□□□ -1.12
Vps50-203ENSMUST00000170873 Znf316Q6PGE4 1016 aa8.05□□□□□ -1.12
Vps50-203ENSMUST00000170873 Ric1Q69ZJ7 1422 aa8.05□□□□□ -1.12
Vps50-203ENSMUST00000170873 Tiam2Q6ZPF3 1715 aa8.05□□□□□ -1.12
Vps50-203ENSMUST00000170873 Aox2Q5SGK3 1345 aa8.05□□□□□ -1.12
Vps50-203ENSMUST00000170873 CoilQ5SU73 570 aa8.05□□□□□ -1.12
Vps50-203ENSMUST00000170873 Simc1E9Q6E9 1354 aa8.05□□□□□ -1.12
Vps50-203ENSMUST00000170873 Nckap5lQ6GQX2 1323 aa8.05□□□□□ -1.12
Vps50-203ENSMUST00000170873 Ssh1Q76I79 1042 aa8.05□□□□□ -1.12
Vps50-203ENSMUST00000170873 Amotl1Q9D4H4 968 aa8.05□□□□□ -1.12
Vps50-203ENSMUST00000170873 Nek4Q9Z1J2 792 aa8.05□□□□□ -1.12
Vps50-203ENSMUST00000170873 Flt4P35917 1363 aa8.04□□□□□ -1.12
Vps50-203ENSMUST00000170873 Ppip5k2Q6ZQB6 1129 aa8.04□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms