RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 E2f4Q8R0K9 410 aa13.34□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Ttc21aQ8C0S4 1314 aa13.34□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Ankrd50F7BE84 1390 aa13.34□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Med1Q925J9 1575 aa13.33□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Slc12a5Q91V14 1138 aa13.33□□□□□ -0.27
Prpf40b-202ENSMUST00000118287 Kif20bQ80WE4 1774 aaKnown RBP13.33□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Speer4f2E9Q366 295 aa13.33□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Swt1Q9DBQ9 907 aa13.32□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Nek4Q9Z1J2 792 aa13.32□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Phlpp1Q8CHE4 1687 aa13.32□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Ccdc171E9Q1U1 1324 aa13.32□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Tns3Q5SSZ5 1440 aa13.32□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 D430041D05RikF6ZGR6 1678 aa13.31□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Erich6bQ9D4S6 220 aa13.31□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Tnrc6bQ8BKI2 1810 aaKnown RBP13.31□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Birc3O08863 600 aa13.31□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 PtmaP26350 111 aa13.31□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 PogkQ80TC5 607 aa13.31□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Brd1E9PZ26 1189 aaKnown RBP13.3□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 PalmQ9Z0P4 383 aa13.3□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Thsd7aQ69ZU6 1645 aa13.3□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 PaskQ8CEE6 1383 aa13.3□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Ccdc146E9Q9F7 977 aa13.3□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 PtpruB1AUH1 1446 aa13.3□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Lmtk3Q5XJV6 1424 aa13.3□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Evi5lH3BKQ3 813 aa13.3□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Erich4Q3UNU4 136 aa13.29□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Nrxn3Q6P9K9 1571 aa13.29□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Gm10093D3YYI8 482 aa13.29□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Hdac1O09106 482 aaKnown RBP13.29□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Fchsd2Q3USJ8 740 aa13.29□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Q4VA45 678 aa13.29□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 C3P01027 1663 aa13.29□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Tbc1d9Q3UYK3 1264 aa13.28□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 NalcnQ8BXR5 1738 aa13.28□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Uhrf1bp1B2KF50 1429 aa13.28□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 C5P06684 1680 aa13.28□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Abcc10Q8R4P9 1501 aa13.28□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Plekhm2Q80TQ5 1018 aa13.27□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 Plin1Q8CGN5 517 aa13.27□□□□□ -0.28
Prpf40b-202ENSMUST00000118287 MycnP03966 462 aaKnown RBP13.27□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Slain2Q8CI08 581 aa13.27□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Rapgef3Q8VCC8 918 aa13.27□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 N4bp2F8VQG7 1678 aaKnown RBP13.26□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Als2Q920R0 1651 aa13.26□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Q3UPC7 1272 aa13.26□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Trim28Q62318 834 aa13.26□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Ap3b2Q9JME5 1082 aa13.26□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Wdr63B2RY71 923 aa13.26□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Col14a1Q80X19 1797 aa13.25□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Zcwpw1Q6IR42 630 aa13.25□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Aldh1l1Q8R0Y6 902 aa13.25□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Bloc1s4Q8VED2 215 aa13.25□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Sirt1Q923E4 737 aa13.25□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Slc35g1Q8BY79 368 aa13.25□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Cdc37l1Q9CZP7 335 aa13.25□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Vamp4O70480 141 aa13.24□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Ltbp4Q8K4G1 1666 aa13.24□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Znf541Q0GGX2 1363 aa13.24□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Dhx16G3X8X0 1044 aaKnown RBP13.24□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 U2surpQ6NV83 1029 aaKnown RBP13.24□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Ddrgk1Q80WW9 315 aa13.24□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Dnajc14Q921R4 703 aa13.24□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Casq1O09165 405 aa13.24□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Pdia4P08003 638 aaKnown RBP13.24□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Irf5P56477 497 aa13.24□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Chd4Q6PDQ2 1915 aaKnown RBP13.23□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Chmp4cQ9D7F7 232 aa13.23□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Sipa1l2Q80TE4 1722 aa13.23□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Cyb5rlB1AS42 316 aa13.23□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Bag4Q8CI61 457 aa13.23□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 CarsQ9ER72 831 aaKnown RBP13.23□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 MvpQ9EQK5 861 aa13.22□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Ppp1r15aP17564 657 aa13.22□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Wwc1Q5SXA9 1104 aa13.22□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 1700019A02RikA0A087WPV9 146 aa13.22□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Gnai1B2RSH2 354 aa13.22□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Hsp90b1P08113 802 aaKnown RBP13.22□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Isy1Q69ZQ2 285 aaKnown RBP13.22□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Gnai3Q9DC51 354 aa13.22□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Nsd3Q6P2L6 1439 aa13.21□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Tex2Q6ZPJ0 1128 aaKnown RBP13.21□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Tmx3Q8BXZ1 456 aa13.21□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Amigo3Q8C2S7 508 aa13.21□□□□□ -0.29
Prpf40b-202ENSMUST00000118287 Atp7bQ64446 1462 aa13.2□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Rasa1E9PYG6 1038 aa13.2□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Nckap5lQ6GQX2 1323 aa13.2□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Ankrd44B2RXR6 993 aa13.2□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Ddx17Q501J6 650 aaKnown RBP13.19□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Cetn4Q8K4K1 168 aa13.19□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Frmpd2A0A140LI67 1392 aa13.19□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Usp16Q99LG0 825 aa13.19□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Gm21190A0A0G2JGJ6 266 aa13.19□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Triml2E9PW10 424 aa13.19□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 GnpatP98192 678 aa13.18□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 VgfQ0VGU4 617 aa13.18□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Cabp2Q9JLK4 216 aa13.18□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 LifrP42703 1092 aa13.18□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Mcm10Q0VBD2 885 aa13.18□□□□□ -0.3
Prpf40b-202ENSMUST00000118287 Psmd1Q3TXS7 953 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms