RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Gsdma3Q5Y4Y6 464 aa18.82■□□□□ 0.6
Nup88-202ENSMUST00000108530 Arfgef2A2A5R2 1792 aa18.81■□□□□ 0.6
Nup88-202ENSMUST00000108530 EspnQ9ET47 871 aa18.81■□□□□ 0.6
Nup88-202ENSMUST00000108530 Kdm6aO70546 1401 aa18.81■□□□□ 0.6
Nup88-202ENSMUST00000108530 Trpm3Q5F4S9 1721 aa18.81■□□□□ 0.6
Nup88-202ENSMUST00000108530 Rab11fip3Q8CHD8 1047 aa18.81■□□□□ 0.6
Nup88-202ENSMUST00000108530 Gm10471E9Q1C7 252 aa18.8■□□□□ 0.6
Nup88-202ENSMUST00000108530 Nol11Q8BJW5 723 aaKnown RBP18.8■□□□□ 0.6
Nup88-202ENSMUST00000108530 Ppp1r37Q8BKR5 712 aa18.8■□□□□ 0.6
Nup88-202ENSMUST00000108530 Egfem1Q8C088 590 aa18.8■□□□□ 0.6
Nup88-202ENSMUST00000108530 Rtl5Q5DTT4 599 aa18.79■□□□□ 0.6
Nup88-202ENSMUST00000108530 Ric3Q8BPM6 367 aa18.79■□□□□ 0.6
Nup88-202ENSMUST00000108530 Tnnt1O88346 262 aa18.78■□□□□ 0.6
Nup88-202ENSMUST00000108530 OptnQ8K3K8 584 aa18.78■□□□□ 0.6
Nup88-202ENSMUST00000108530 Amotl1Q9D4H4 968 aa18.78■□□□□ 0.6
Nup88-202ENSMUST00000108530 MarsQ68FL6 902 aaKnown RBP18.77■□□□□ 0.6
Nup88-202ENSMUST00000108530 AU019823E9PUQ3 292 aa18.77■□□□□ 0.6
Nup88-202ENSMUST00000108530 Chl1P70232 1209 aa18.77■□□□□ 0.6
Nup88-202ENSMUST00000108530 Nkx2-3P97334 362 aa18.77■□□□□ 0.6
Nup88-202ENSMUST00000108530 Col15a1O35206 1367 aa18.77■□□□□ 0.59
Nup88-202ENSMUST00000108530 Cyb5rlB1AS42 316 aa18.76■□□□□ 0.59
Nup88-202ENSMUST00000108530 Q3TQI7 289 aaKnown RBP18.76■□□□□ 0.59
Nup88-202ENSMUST00000108530 MvpQ9EQK5 861 aa18.76■□□□□ 0.59
Nup88-202ENSMUST00000108530 Adgrb1Q3UHD1 1582 aa18.76■□□□□ 0.59
Nup88-202ENSMUST00000108530 Cavin2Q63918 418 aaKnown RBP18.75■□□□□ 0.59
Nup88-202ENSMUST00000108530 Acsbg1Q99PU5 721 aa18.75■□□□□ 0.59
Nup88-202ENSMUST00000108530 Kif24Q6NWW5 1356 aa18.75■□□□□ 0.59
Nup88-202ENSMUST00000108530 Cyp2d12Q8BVD2 504 aa18.75■□□□□ 0.59
Nup88-202ENSMUST00000108530 Gli3Q61602 1583 aa18.74■□□□□ 0.59
Nup88-202ENSMUST00000108530 CrklP47941 303 aa18.74■□□□□ 0.59
Nup88-202ENSMUST00000108530 Foxp4Q9DBY0 795 aaKnown RBP18.74■□□□□ 0.59
Nup88-202ENSMUST00000108530 Card10P58660 1021 aa18.74■□□□□ 0.59
Nup88-202ENSMUST00000108530 Txnrd1Q9JMH6 613 aa18.74■□□□□ 0.59
Nup88-202ENSMUST00000108530 Ankrd44B2RXR6 993 aa18.73■□□□□ 0.59
Nup88-202ENSMUST00000108530 4930567H17RikQ3V0K5 233 aa18.73■□□□□ 0.59
Nup88-202ENSMUST00000108530 Nid2O88322 1403 aa18.73■□□□□ 0.59
Nup88-202ENSMUST00000108530 Zmym3Q9JLM4 1370 aa18.73■□□□□ 0.59
Nup88-202ENSMUST00000108530 Chpf2Q3UU43 768 aa18.73■□□□□ 0.59
Nup88-202ENSMUST00000108530 Zranb3Q6NZP1 1069 aa18.73■□□□□ 0.59
Nup88-202ENSMUST00000108530 Nup153E9Q3G8 1462 aaKnown RBP18.72■□□□□ 0.59
Nup88-202ENSMUST00000108530 Fam83gQ5SWY7 812 aa18.72■□□□□ 0.59
Nup88-202ENSMUST00000108530 TkfcQ8VC30 578 aa18.72■□□□□ 0.59
Nup88-202ENSMUST00000108530 AampJ3QN89 436 aa18.71■□□□□ 0.59
Nup88-202ENSMUST00000108530 Sv2bQ8BG39 683 aa18.71■□□□□ 0.59
Nup88-202ENSMUST00000108530 Pnmal2G3X9N3 661 aa18.7■□□□□ 0.58
Nup88-202ENSMUST00000108530 Msh6P54276 1358 aaKnown RBP18.7■□□□□ 0.58
Nup88-202ENSMUST00000108530 Aox2Q5SGK3 1345 aa18.7■□□□□ 0.58
Nup88-202ENSMUST00000108530 Fam50bQ9WTJ8 334 aa18.7■□□□□ 0.58
Nup88-202ENSMUST00000108530 Smim5Q8BT42 78 aa18.69■□□□□ 0.58
Nup88-202ENSMUST00000108530 Igsf1Q7TQA1 1317 aa18.69■□□□□ 0.58
Nup88-202ENSMUST00000108530 Arhgef1Q61210 920 aaKnown RBP18.69■□□□□ 0.58
Nup88-202ENSMUST00000108530 Simc1E9Q6E9 1354 aa18.68■□□□□ 0.58
Nup88-202ENSMUST00000108530 RgmbQ7TQ33 436 aa18.68■□□□□ 0.58
Nup88-202ENSMUST00000108530 Ccdc155Q80VJ8 648 aa18.68■□□□□ 0.58
Nup88-202ENSMUST00000108530 ThemisQ8BGW0 636 aa18.68■□□□□ 0.58
Nup88-202ENSMUST00000108530 Trim30dE9PWL0 497 aa18.67■□□□□ 0.58
Nup88-202ENSMUST00000108530 Btbd11Q6GQW0 1109 aa18.67■□□□□ 0.58
Nup88-202ENSMUST00000108530 DccP70211 1447 aa18.66■□□□□ 0.58
Nup88-202ENSMUST00000108530 Atf5O70191 283 aa18.66■□□□□ 0.58
Nup88-202ENSMUST00000108530 Pdzd9Q9D9M4 266 aa18.65■□□□□ 0.58
Nup88-202ENSMUST00000108530 Abca15E9PWH4 1668 aa18.64■□□□□ 0.57
Nup88-202ENSMUST00000108530 Bcl2l13P59017 434 aa18.64■□□□□ 0.57
Nup88-202ENSMUST00000108530 Eif4a1P60843 406 aaKnown RBP18.64■□□□□ 0.57
Nup88-202ENSMUST00000108530 Cadps2Q8BYR5 1297 aa18.64■□□□□ 0.57
Nup88-202ENSMUST00000108530 Triml2E9PW10 424 aa18.63■□□□□ 0.57
Nup88-202ENSMUST00000108530 Fkbp4P30416 458 aa18.63■□□□□ 0.57
Nup88-202ENSMUST00000108530 Atl3Q91YH5 541 aa18.62■□□□□ 0.57
Nup88-202ENSMUST00000108530 Abcc12Q80WJ6 1366 aa18.62■□□□□ 0.57
Nup88-202ENSMUST00000108530 Fgd1P52734 960 aa18.61■□□□□ 0.57
Nup88-202ENSMUST00000108530 Ppp2r3aB2RXC8 1150 aa18.6■□□□□ 0.57
Nup88-202ENSMUST00000108530 Cc2d1aQ8K1A6 943 aa18.6■□□□□ 0.57
Nup88-202ENSMUST00000108530 Bcl9lQ67FY2 1494 aa18.6■□□□□ 0.57
Nup88-202ENSMUST00000108530 Phkg2Q9DB30 406 aa18.6■□□□□ 0.57
Nup88-202ENSMUST00000108530 Atp10bB1AWN4 1474 aa18.59■□□□□ 0.57
Nup88-202ENSMUST00000108530 Cdhr2E9Q7P9 1308 aa18.59■□□□□ 0.57
Nup88-202ENSMUST00000108530 Cyp2d11P24457 504 aa18.59■□□□□ 0.57
Nup88-202ENSMUST00000108530 SkilQ60665 675 aa18.59■□□□□ 0.57
Nup88-202ENSMUST00000108530 Chmp7Q8R1T1 451 aa18.59■□□□□ 0.57
Nup88-202ENSMUST00000108530 Prkar2bP31324 416 aa18.59■□□□□ 0.57
Nup88-202ENSMUST00000108530 Chmp4bQ9D8B3 224 aaKnown RBP18.59■□□□□ 0.57
Nup88-202ENSMUST00000108530 Zfp142G5E869 1843 aa18.58■□□□□ 0.57
Nup88-202ENSMUST00000108530 Larp1Q6ZQ58 1072 aaKnown RBP18.58■□□□□ 0.56
Nup88-202ENSMUST00000108530 Ak7Q9D2H2 614 aa18.58■□□□□ 0.56
Nup88-202ENSMUST00000108530 Pnpla7A2AJ88 1352 aa18.58■□□□□ 0.56
Nup88-202ENSMUST00000108530 Col1a2Q01149 1372 aa18.58■□□□□ 0.56
Nup88-202ENSMUST00000108530 Dlg5E9Q9R9 1921 aa18.58■□□□□ 0.56
Nup88-202ENSMUST00000108530 Phf23Q8BSN5 401 aa18.57■□□□□ 0.56
Nup88-202ENSMUST00000108530 Gimap5Q8BWF2 308 aa18.57■□□□□ 0.56
Nup88-202ENSMUST00000108530 Disp3A3KFU9 1347 aa18.57■□□□□ 0.56
Nup88-202ENSMUST00000108530 HdgfP51859 237 aaKnown RBP18.57■□□□□ 0.56
Nup88-202ENSMUST00000108530 Trim27Q62158 513 aa18.57■□□□□ 0.56
Nup88-202ENSMUST00000108530 Slit1Q80TR4 1531 aa18.57■□□□□ 0.56
Nup88-202ENSMUST00000108530 Myo5bP21271 1818 aa18.57■□□□□ 0.56
Nup88-202ENSMUST00000108530 Ccdc183A2AJB1 534 aa18.56■□□□□ 0.56
Nup88-202ENSMUST00000108530 Hs1bp3Q3TC93 395 aa18.56■□□□□ 0.56
Nup88-202ENSMUST00000108530 Zpr1Q62384 459 aa18.56■□□□□ 0.56
Nup88-202ENSMUST00000108530 Aldh1l2Q8K009 923 aa18.56■□□□□ 0.56
Nup88-202ENSMUST00000108530 Speer4bQ9D9F7 267 aa18.56■□□□□ 0.56
Nup88-202ENSMUST00000108530 Bcl11bQ99PV8 884 aa18.56■□□□□ 0.56
Nup88-202ENSMUST00000108530 ChgaP26339 463 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms