RNA–Protein interactions for RNA: ENSMUST00000107700.3

Snf8-202, Transcript of Vacuolar-sorting protein SNF8, mousemouse

TSL 2 BASIC

Gene Snf8, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8-202ENSMUST00000107700 Zscan10Q3URR7 782 aa36.24■■■■□ 3.39
Snf8-202ENSMUST00000107700 Rad23bP54728 416 aa36.22■■■■□ 3.39
Snf8-202ENSMUST00000107700 Hirip3Q8BLH7 601 aa36.22■■■■□ 3.39
Snf8-202ENSMUST00000107700 Zswim8Q3UHH1 1832 aaKnown RBP36.2■■■■□ 3.39
Snf8-202ENSMUST00000107700 Gm21663A0A0G2JE01 267 aa36.2■■■■□ 3.39
Snf8-202ENSMUST00000107700 MeiocA2AG06 965 aa36.2■■■■□ 3.39
Snf8-202ENSMUST00000107700 Gm7361D3Z6R1 267 aa36.2■■■■□ 3.39
Snf8-202ENSMUST00000107700 5031410I06RikE9Q4E0 267 aa36.2■■■■□ 3.39
Snf8-202ENSMUST00000107700 Gm1979E9QAN3 267 aa36.2■■■■□ 3.39
Snf8-202ENSMUST00000107700 Gm5862K7N5V5 267 aa36.2■■■■□ 3.39
Snf8-202ENSMUST00000107700 Gm10220K7N660 267 aa36.2■■■■□ 3.39
Snf8-202ENSMUST00000107700 Trim28Q62318 834 aa36.2■■■■□ 3.39
Snf8-202ENSMUST00000107700 ErfeQ6PGN1 340 aa36.2■■■■□ 3.39
Snf8-202ENSMUST00000107700 Eif3bQ8JZQ9 803 aaKnown RBP36.19■■■■□ 3.38
Snf8-202ENSMUST00000107700 PnisrA2AJT4 805 aaKnown RBP36.18■■■■□ 3.38
Snf8-202ENSMUST00000107700 MpripP97434 1024 aa36.18■■■■□ 3.38
Snf8-202ENSMUST00000107700 Bicdl1A0JNT9 577 aa36.17■■■■□ 3.38
Snf8-202ENSMUST00000107700 Tjp1P39447 1745 aaKnown RBP36.17■■■■□ 3.38
Snf8-202ENSMUST00000107700 Zcwpw1Q6IR42 630 aa36.16■■■■□ 3.38
Snf8-202ENSMUST00000107700 Rsph6aQ8CDR2 708 aa36.16■■■■□ 3.38
Snf8-202ENSMUST00000107700 Crb1Q8VHS2 1405 aa36.16■■■■□ 3.38
Snf8-202ENSMUST00000107700 Chrna2Q91X60 512 aa36.15■■■■□ 3.38
Snf8-202ENSMUST00000107700 Lrp5Q91VN0 1614 aa36.15■■■■□ 3.38
Snf8-202ENSMUST00000107700 Jdp2P97875 163 aa36.14■■■■□ 3.38
Snf8-202ENSMUST00000107700 Slc5a1Q8C3K6 665 aa36.14■■■■□ 3.38
Snf8-202ENSMUST00000107700 Mtfr1lQ9CWE0 289 aa36.14■■■■□ 3.38
Snf8-202ENSMUST00000107700 Msl1Q6PDM1 616 aa36.13■■■■□ 3.37
Snf8-202ENSMUST00000107700 Ppp1r15aP17564 657 aa36.12■■■■□ 3.37
Snf8-202ENSMUST00000107700 ClspnQ80YR7 1315 aa36.11■■■■□ 3.37
Snf8-202ENSMUST00000107700 Ppef1O35655 650 aa36.11■■■■□ 3.37
Snf8-202ENSMUST00000107700 Hdac6Q9Z2V5 1149 aa36.1■■■■□ 3.37
Snf8-202ENSMUST00000107700 NefmP08553 848 aa36.09■■■■□ 3.37
Snf8-202ENSMUST00000107700 Asic4Q7TNS7 539 aa36.09■■■■□ 3.37
Snf8-202ENSMUST00000107700 Egfem1Q8C088 590 aa36.08■■■■□ 3.37
Snf8-202ENSMUST00000107700 Ppm1fQ8CGA0 452 aa36.08■■■■□ 3.37
Snf8-202ENSMUST00000107700 Phkg2Q9DB30 406 aa36.08■■■■□ 3.37
Snf8-202ENSMUST00000107700 CoblQ5NBX1 1337 aaKnown RBP36.08■■■■□ 3.37
Snf8-202ENSMUST00000107700 Larp1bA0A0A6YXJ7 370 aaKnown RBP36.07■■■■□ 3.36
Snf8-202ENSMUST00000107700 Cald1E9QA15 768 aaKnown RBP36.07■■■■□ 3.36
Snf8-202ENSMUST00000107700 Slc34a2Q9DBP0 697 aa36.06■■■■□ 3.36
Snf8-202ENSMUST00000107700 Ints5Q8CHT3 1018 aa36.05■■■■□ 3.36
Snf8-202ENSMUST00000107700 Col23a1Q8K4G2 532 aa36.05■■■■□ 3.36
Snf8-202ENSMUST00000107700 Plin1Q8CGN5 517 aa36.04■■■■□ 3.36
Snf8-202ENSMUST00000107700 NppbP40753 121 aa36.02■■■■□ 3.36
Snf8-202ENSMUST00000107700 Magea6O89010 325 aa36.01■■■■□ 3.36
Snf8-202ENSMUST00000107700 Magea3Q6T340 320 aa36.01■■■■□ 3.36
Snf8-202ENSMUST00000107700 Pdzd9Q9D9M4 266 aa36.01■■■■□ 3.36
Snf8-202ENSMUST00000107700 Prom2Q3UUY6 835 aa36■■■■□ 3.35
Snf8-202ENSMUST00000107700 Plekhg5Q66T02 1073 aa36■■■■□ 3.35
Snf8-202ENSMUST00000107700 Sgip1Q8VD37 806 aa36■■■■□ 3.35
Snf8-202ENSMUST00000107700 Slc12a5Q91V14 1138 aa36■■■■□ 3.35
Snf8-202ENSMUST00000107700 Usp21Q9QZL6 566 aa36■■■■□ 3.35
Snf8-202ENSMUST00000107700 Ssfa2Q922B9 1252 aa35.99■■■■□ 3.35
Snf8-202ENSMUST00000107700 Rnf180Q3U827 592 aa35.98■■■■□ 3.35
Snf8-202ENSMUST00000107700 Sumf1Q8R0F3 372 aa35.98■■■■□ 3.35
Snf8-202ENSMUST00000107700 Sned1Q70E20 1403 aa35.98■■■■□ 3.35
Snf8-202ENSMUST00000107700 Atg3Q9CPX6 314 aa35.97■■■■□ 3.35
Snf8-202ENSMUST00000107700 Gm13023A2A8N2 498 aa35.96■■■■□ 3.35
Snf8-202ENSMUST00000107700 Gsdma3Q5Y4Y6 464 aa35.95■■■■□ 3.35
Snf8-202ENSMUST00000107700 Chmp7Q8R1T1 451 aa35.93■■■■□ 3.34
Snf8-202ENSMUST00000107700 Ubr3Q5U430 1889 aa35.92■■■■□ 3.34
Snf8-202ENSMUST00000107700 Smarcc1P97496 1104 aa35.91■■■■□ 3.34
Snf8-202ENSMUST00000107700 Msh6P54276 1358 aaKnown RBP35.9■■■■□ 3.34
Snf8-202ENSMUST00000107700 Znrd1-asQ8R0E5 213 aa35.9■■■■□ 3.34
Snf8-202ENSMUST00000107700 HypkQ9CR41 129 aa35.9■■■■□ 3.34
Snf8-202ENSMUST00000107700 P2rx7Q9Z1M0 595 aa35.9■■■■□ 3.34
Snf8-202ENSMUST00000107700 Yy1Q00899 414 aa35.89■■■■□ 3.34
Snf8-202ENSMUST00000107700 Jmjd4Q8BFT6 427 aa35.89■■■■□ 3.34
Snf8-202ENSMUST00000107700 Spata31d1bE9QA57 1361 aa35.89■■■■□ 3.34
Snf8-202ENSMUST00000107700 Aox2Q5SGK3 1345 aa35.88■■■■□ 3.33
Snf8-202ENSMUST00000107700 Mcm10Q0VBD2 885 aa35.88■■■■□ 3.33
Snf8-202ENSMUST00000107700 Mrps5Q99N87 432 aaKnown RBP35.88■■■■□ 3.33
Snf8-202ENSMUST00000107700 Amotl1Q9D4H4 968 aa35.88■■■■□ 3.33
Snf8-202ENSMUST00000107700 Col11a2Q64739 1736 aa35.88■■■■□ 3.33
Snf8-202ENSMUST00000107700 Dcaf5Q80T85 946 aa35.86■■■■□ 3.33
Snf8-202ENSMUST00000107700 Igf2rQ07113 2483 aaKnown RBP35.86■■■■□ 3.33
Snf8-202ENSMUST00000107700 Plch1Q4KWH5 1682 aa35.85■■■■□ 3.33
Snf8-202ENSMUST00000107700 Rapgefl1Q68EF8 662 aa35.85■■■■□ 3.33
Snf8-202ENSMUST00000107700 Cap2Q9CYT6 476 aa35.85■■■■□ 3.33
Snf8-202ENSMUST00000107700 TnikP83510 1323 aa35.84■■■■□ 3.33
Snf8-202ENSMUST00000107700 Spef2Q8C9J3 1734 aa35.83■■■■□ 3.33
Snf8-202ENSMUST00000107700 Miga2Q8BK03 593 aa35.83■■■■□ 3.33
Snf8-202ENSMUST00000107700 C4bP01029 1738 aa35.82■■■■□ 3.32
Snf8-202ENSMUST00000107700 Kiaa1107Q80TK0 1369 aa35.81■■■■□ 3.32
Snf8-202ENSMUST00000107700 Sos1Q62245 1319 aa35.81■■■■□ 3.32
Snf8-202ENSMUST00000107700 Trpm3Q5F4S9 1721 aa35.8■■■■□ 3.32
Snf8-202ENSMUST00000107700 Zfp777B9EKF4 885 aa35.8■■■■□ 3.32
Snf8-202ENSMUST00000107700 Nkx2-3P97334 362 aa35.79■■■■□ 3.32
Snf8-202ENSMUST00000107700 PalmQ9Z0P4 383 aa35.79■■■■□ 3.32
Snf8-202ENSMUST00000107700 Ubr2Q6WKZ8 1755 aa35.78■■■■□ 3.32
Snf8-202ENSMUST00000107700 Ric1Q69ZJ7 1422 aa35.75■■■■□ 3.31
Snf8-202ENSMUST00000107700 Kcnn1Q9EQR3 537 aa35.75■■■■□ 3.31
Snf8-202ENSMUST00000107700 Ccdc155Q80VJ8 648 aa35.74■■■■□ 3.31
Snf8-202ENSMUST00000107700 Gpr162Q3UN16 588 aa35.73■■■■□ 3.31
Snf8-202ENSMUST00000107700 CpzQ8R4V4 654 aa35.73■■■■□ 3.31
Snf8-202ENSMUST00000107700 Smg7Q5RJH6 1138 aaKnown RBP35.71■■■■□ 3.31
Snf8-202ENSMUST00000107700 Kndc1Q0KK55 1742 aa35.69■■■■□ 3.3
Snf8-202ENSMUST00000107700 RtcbQ99LF4 505 aaKnown RBP35.69■■■■□ 3.3
Snf8-202ENSMUST00000107700 Rnaseh2aQ9CWY8 301 aa35.67■■■■□ 3.3
Snf8-202ENSMUST00000107700 Tlr8P58682 1032 aa35.66■■■■□ 3.3
Retrieved 100 of 22,080 RNA–protein pairs in 94.8 ms