RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Kcnq2Q9Z351 759 aa16.63■□□□□ 0.25
Ccdc28b-202ENSMUST00000106035 Tns2Q8CGB6 1400 aa16.62■□□□□ 0.25
Ccdc28b-202ENSMUST00000106035 Klc3Q91W40 508 aa16.61■□□□□ 0.25
Ccdc28b-202ENSMUST00000106035 PappaQ8R4K8 1624 aa16.6■□□□□ 0.25
Ccdc28b-202ENSMUST00000106035 Ccnl1Q52KE7 532 aaKnown RBP16.59■□□□□ 0.25
Ccdc28b-202ENSMUST00000106035 Gsdma3Q5Y4Y6 464 aa16.59■□□□□ 0.25
Ccdc28b-202ENSMUST00000106035 ErfeQ6PGN1 340 aa16.59■□□□□ 0.25
Ccdc28b-202ENSMUST00000106035 Ssfa2Q922B9 1252 aa16.59■□□□□ 0.25
Ccdc28b-202ENSMUST00000106035 Shank3Q4ACU6 1730 aa16.59■□□□□ 0.25
Ccdc28b-202ENSMUST00000106035 Igsf1Q7TQA1 1317 aa16.58■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 MpripP97434 1024 aa16.57■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Slc5a1Q8C3K6 665 aa16.57■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Slc12a5Q91V14 1138 aa16.57■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Phkg2Q9DB30 406 aa16.57■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Crb1Q8VHS2 1405 aa16.56■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Gm21663A0A0G2JE01 267 aa16.56■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Gm7361D3Z6R1 267 aa16.56■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 5031410I06RikE9Q4E0 267 aa16.56■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Gm1979E9QAN3 267 aa16.56■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Gm5862K7N5V5 267 aa16.56■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Gm10220K7N660 267 aa16.56■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 IncenpQ9WU62 880 aa16.56■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 CoblQ5NBX1 1337 aaKnown RBP16.55■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 MeiocA2AG06 965 aa16.55■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Las1lA2BE28 776 aaKnown RBP16.55■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Ubxn2bQ0KL01 331 aa16.55■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Hdac6Q9Z2V5 1149 aa16.55■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 NppbP40753 121 aa16.54■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Asic4Q7TNS7 539 aa16.54■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 HypkQ9CR41 129 aa16.54■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Amotl1Q9D4H4 968 aa16.54■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Emilin1Q99K41 1017 aa16.52■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Pdzd9Q9D9M4 266 aa16.52■□□□□ 0.24
Ccdc28b-202ENSMUST00000106035 Fchsd2Q3USJ8 740 aa16.51■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Rab11fip3Q8CHD8 1047 aa16.51■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Ints5Q8CHT3 1018 aa16.51■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 P2rx7Q9Z1M0 595 aa16.51■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Jdp2P97875 163 aa16.5■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Mtfr1lQ9CWE0 289 aa16.5■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Aox2Q5SGK3 1345 aa16.49■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.49■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Chmp7Q8R1T1 451 aa16.49■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Jmjd4Q8BFT6 427 aa16.48■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Atg3Q9CPX6 314 aa16.48■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Spata31d1bE9QA57 1361 aa16.48■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Msh6P54276 1358 aaKnown RBP16.48■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Bicdl1A0JNT9 577 aa16.47■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Tjp1P39447 1745 aaKnown RBP16.47■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 TnikP83510 1323 aa16.46■□□□□ 0.23
Ccdc28b-202ENSMUST00000106035 Dcaf5Q80T85 946 aa16.45■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Egfem1Q8C088 590 aa16.45■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Gm13023A2A8N2 498 aa16.44■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Prom2Q3UUY6 835 aa16.44■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Ppp2r1aQ76MZ3 589 aa16.44■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Col23a1Q8K4G2 532 aa16.44■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 PalmQ9Z0P4 383 aa16.44■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Ric1Q69ZJ7 1422 aa16.44■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Hirip3Q8BLH7 601 aa16.43■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Plin1Q8CGN5 517 aa16.43■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Ppef1O35655 650 aa16.42■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Rad23bP54728 416 aa16.42■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Zfyve9A2A8R0 1397 aa16.41■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Smarcc1P97496 1104 aa16.41■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Mcm10Q0VBD2 885 aa16.41■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Sumf1Q8R0F3 372 aa16.41■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Sgip1Q8VD37 806 aa16.41■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Sned1Q70E20 1403 aa16.41■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Stk31Q99MW1 1018 aa16.4■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Cap2Q9CYT6 476 aa16.4■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Sos1Q62245 1319 aa16.4■□□□□ 0.22
Ccdc28b-202ENSMUST00000106035 Spef2Q8C9J3 1734 aa16.39■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Rnf180Q3U827 592 aa16.39■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Tsen2Q6P7W5 460 aa16.39■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Znrd1-asQ8R0E5 213 aa16.39■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Mrps5Q99N87 432 aaKnown RBP16.39■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Magea6O89010 325 aa16.38■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 TmpoQ61033 693 aaKnown RBP16.38■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Magea3Q6T340 320 aa16.38■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Miga2Q8BK03 593 aa16.38■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Zswim8Q3UHH1 1832 aaKnown RBP16.38■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Kiaa1107Q80TK0 1369 aa16.38■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Ubr2Q6WKZ8 1755 aa16.37■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Nkx2-3P97334 362 aa16.37■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Msl1Q6PDM1 616 aa16.37■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Chrna2Q91X60 512 aa16.37■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Lrp5Q91VN0 1614 aa16.37■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Smg7Q5RJH6 1138 aaKnown RBP16.36■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Ubr3Q5U430 1889 aa16.35■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Pde4dQ01063 747 aa16.35■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Nlrp6Q91WS2 869 aa16.35■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 RtcbQ99LF4 505 aaKnown RBP16.35■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Iqcf3Q9D498 203 aa16.35■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 GsdmaQ9EST1 446 aa16.35■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Adcy9P51830 1353 aa16.35■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Trpm3Q5F4S9 1721 aa16.34■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Lrrc43Q3V0L5 667 aa16.34■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Ccdc155Q80VJ8 648 aa16.34■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 DiexfQ8BTT6 772 aaKnown RBP16.34■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Mapk8ip2Q9ERE9 830 aa16.34■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 Usp21Q9QZL6 566 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms