RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Prkar2bP31324 416 aa14.21□□□□□ -0.13
Col9a1-202ENSMUST00000088349 Ncapd2Q8K2Z4 1392 aa14.21□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Ddrgk1Q80WW9 315 aa14.21□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Prdm2A2A7B5 1709 aaKnown RBP14.2□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Dhx16G3X8X0 1044 aaKnown RBP14.2□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Nucb1Q02819 459 aaKnown RBP14.2□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Idi2Q8BFZ6 227 aa14.2□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Gcc1Q9D4H2 778 aa14.2□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Atp7bQ64446 1462 aa14.2□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Rnf214Q8BFU3 668 aaKnown RBP14.2□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Aldh8a1Q8BH00 487 aa14.2□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Anapc15-psA0A140T8L6 141 aa14.19□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Cyp46a1Q9WVK8 500 aa14.19□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Kif24Q6NWW5 1356 aa14.19□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Bcar3Q9QZK2 820 aa14.18□□□□□ -0.14
Col9a1-202ENSMUST00000088349 TmpoQ61033 693 aaKnown RBP14.18□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Phactr2B1AVP0 632 aa14.18□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Rbm27Q5SFM8 1060 aaKnown RBP14.18□□□□□ -0.14
Col9a1-202ENSMUST00000088349 MarsQ68FL6 902 aaKnown RBP14.18□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Cyp27a1Q9DBG1 533 aa14.18□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Syce3B5KM66 88 aa14.17□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Gadd45bP22339 160 aa14.17□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Q3UJC8 639 aa14.17□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Prune1Q8BIW1 454 aa14.17□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Gm9992B2RWK3 458 aa14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Pdia4P08003 638 aaKnown RBP14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Tmem132eQ6IEE6 982 aa14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Unc93aQ710D3 458 aa14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Ift172Q6VH22 1749 aa14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Atg4a-psA0A0G2JFS9 396 aa14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Hsp90b1P08113 802 aaKnown RBP14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Cpa2Q504N0 417 aa14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Ccne1Q61457 408 aa14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Atg4aQ8C9S8 396 aa14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Abca14E9Q8F8 1683 aa14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Nol12Q8BG17 217 aa14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 4931400O07RikQ9D4M5 137 aa14.16□□□□□ -0.14
Col9a1-202ENSMUST00000088349 CltcQ68FD5 1675 aaKnown RBP14.15□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Rtf1A2AQ19 715 aaKnown RBP14.15□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Hmox1P14901 289 aa14.15□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Mcm2P97310 904 aa14.15□□□□□ -0.14
Col9a1-202ENSMUST00000088349 Zdhhc9P59268 364 aa14.14□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Erc2Q6PH08 957 aa14.14□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Tshz3Q8CGV9 1081 aa14.14□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Tm6sf1P58749 370 aa14.14□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Q3TQI7 289 aaKnown RBP14.14□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Zkscan16A2ALW2 728 aa14.13□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Idi1P58044 227 aa14.13□□□□□ -0.15
Col9a1-202ENSMUST00000088349 VgfQ0VGU4 617 aa14.13□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Pank2Q3U4S0 443 aa14.13□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Kif13aQ9EQW7 1749 aa14.13□□□□□ -0.15
Col9a1-202ENSMUST00000088349 CatipB9EKE5 520 aa14.13□□□□□ -0.15
Col9a1-202ENSMUST00000088349 ImpactO55091 318 aa14.13□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Fam83gQ5SWY7 812 aa14.13□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Cavin2Q63918 418 aaKnown RBP14.13□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Rsph4aQ8BYM7 716 aa14.13□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Sos1Q62245 1319 aa14.13□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Sv2bQ8BG39 683 aa14.13□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Bcl2l13P59017 434 aa14.12□□□□□ -0.15
Col9a1-202ENSMUST00000088349 NexnQ7TPW1 607 aa14.12□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Erbb4Q61527 1308 aa14.12□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Znf541Q0GGX2 1363 aa14.11□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Srgap3Q812A2 1099 aa14.11□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Chl1P70232 1209 aa14.11□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Aldh1l2Q8K009 923 aa14.11□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Dennd6aQ8BH65 605 aa14.11□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Ush1cQ9ES64 910 aa14.11□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Gm10563F6WIE4 79 aa14.1□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Slc35g1Q8BY79 368 aa14.1□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Clcn1Q64347 994 aa14.1□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Eya1P97767 591 aa14.09□□□□□ -0.15
Col9a1-202ENSMUST00000088349 IbspQ61711 324 aa14.09□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Arhgef28P97433 1693 aa14.09□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Elp1Q7TT37 1333 aaKnown RBP14.09□□□□□ -0.15
Col9a1-202ENSMUST00000088349 RestQ8VIG1 1082 aa14.09□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Adamts7Q68SA9 1657 aa14.09□□□□□ -0.15
Col9a1-202ENSMUST00000088349 NktrP30415 1453 aa14.09□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Filip1lQ6P6L0 1131 aa14.09□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Gripap1Q8VD04 806 aa14.09□□□□□ -0.15
Col9a1-202ENSMUST00000088349 Tpm2P58774 284 aa14.08□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Ptpdc1Q6NZK8 747 aa14.08□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Ppp1r42Q8R1Z4 357 aa14.08□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Nphp1Q9QY53 687 aa14.08□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Sytl4Q9R0Q1 673 aa14.08□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Jakmip1Q8BVL9 626 aa14.07□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Rcan3Q9JKK0 239 aa14.07□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Zfp777B9EKF4 885 aa14.07□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Zkscan2G3X952 960 aa14.07□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Becn1O88597 448 aa14.07□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Cwc27Q3TKY6 469 aa14.07□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Fez1Q8K0X8 392 aa14.07□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Ripk4Q9ERK0 786 aa14.07□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Ap3b2Q9JME5 1082 aa14.07□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Gnai2P08752 355 aaKnown RBP14.06□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Kif4P33174 1231 aa14.06□□□□□ -0.16
Col9a1-202ENSMUST00000088349 EvcP57680 1005 aa14.06□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Dnajc5P60904 198 aa14.06□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Tmem94Q7TSH8 1360 aa14.06□□□□□ -0.16
Col9a1-202ENSMUST00000088349 MccE9PWI3 1003 aa14.06□□□□□ -0.16
Col9a1-202ENSMUST00000088349 Mrps27Q8BK72 415 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms